Britta Velten
| Snapshot Date: 2026-03-09 13:45 -0400 (Mon, 09 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_22 |
| git_last_commit: 76fc31b |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Build/check report for BioC 3.22: simplified long |
|
This page was generated on 2026-03-10 11:57 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" | 4892 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 922/2361 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.26.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.26.0 |
| Command: /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz |
| StartedAt: 2026-03-10 00:06:06 -0400 (Tue, 10 Mar 2026) |
| EndedAt: 2026-03-10 00:07:37 -0400 (Tue, 10 Mar 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.22-bioc/R/site-library --timings graper_1.26.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck’
* using R version 4.5.2 (2025-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.26.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
* checking installed package size ... INFO
installed size is 6.1Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/home/biocbuild/bbs-3.22-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.22-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.26.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.22-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.22-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.22-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.22-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.22-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.22-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-803.362
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.216
ELB improved by 233.146
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.21
ELB improved by 62.0058
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.853
ELB improved by 47.3578
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.56
ELB improved by 24.2924
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.029
ELB improved by 9.53071
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.936
ELB improved by 4.09296
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.669
ELB improved by 2.26721
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.182
ELB improved by 1.48752
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.087
ELB improved by 1.09499
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.214
ELB improved by 0.872564
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.48
ELB improved by 0.73378
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.842
ELB improved by 0.638814
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.274
ELB improved by 0.567936
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.762
ELB improved by 0.511219
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.299
ELB improved by 0.463645
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.876
ELB improved by 0.422634
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.489
ELB improved by 0.386786
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.134
ELB improved by 0.355243
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.807
ELB improved by 0.327381
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.504
ELB improved by 0.302667
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.223
ELB improved by 0.280609
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.963
ELB improved by 0.260746
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.72
ELB improved by 0.242656
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.494
ELB improved by 0.225963
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.284
ELB improved by 0.21035
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.088
ELB improved by 0.195569
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.907
ELB improved by 0.18144
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.739
ELB improved by 0.167851
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.584
ELB improved by 0.154753
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.442
ELB improved by 0.142148
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.312
ELB improved by 0.130076
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.193
ELB improved by 0.118598
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.086
ELB improved by 0.107782
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.988
ELB improved by 0.0976922
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.899
ELB improved by 0.0883748
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.82
ELB improved by 0.0798562
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.747
ELB improved by 0.07214
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.682
ELB improved by 0.0652085
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.623
ELB improved by 0.0590262
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.57
ELB improved by 0.0535443
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.521
ELB improved by 0.0487055
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.477
ELB improved by 0.0444487
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.436
ELB improved by 0.0407121
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.398
ELB improved by 0.0374361
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.364
ELB improved by 0.0345655
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.332
ELB improved by 0.0320496
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.302
ELB improved by 0.0298438
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.274
ELB improved by 0.0279085
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.248
ELB improved by 0.0262097
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.223
ELB improved by 0.024718
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.2
ELB improved by 0.0234083
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.177
ELB improved by 0.0222594
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.156
ELB improved by 0.021253
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.136
ELB improved by 0.020374
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.116
ELB improved by 0.0196093
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.097
ELB improved by 0.0189481
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.079
ELB improved by 0.0183811
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.061
ELB improved by 0.0179007
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.043
ELB improved by 0.0175004
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.026
ELB improved by 0.017175
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.009
ELB improved by 0.0169201
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.993
ELB improved by 0.0167324
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.976
ELB improved by 0.0166094
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.959
ELB improved by 0.0165492
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.943
ELB improved by 0.0165508
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.926
ELB improved by 0.016614
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.91
ELB improved by 0.0167391
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.893
ELB improved by 0.0169274
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.875
ELB improved by 0.0171807
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.858
ELB improved by 0.017502
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.84
ELB improved by 0.0178949
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.822
ELB improved by 0.0183643
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.803
ELB improved by 0.0189162
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.783
ELB improved by 0.0195578
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.763
ELB improved by 0.0202981
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.742
ELB improved by 0.0211478
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.72
ELB improved by 0.02212
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.696
ELB improved by 0.0232301
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.672
ELB improved by 0.0244971
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.646
ELB improved by 0.0259436
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.618
ELB improved by 0.0275969
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.589
ELB improved by 0.0294901
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.557
ELB improved by 0.0316635
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.523
ELB improved by 0.034166
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.486
ELB improved by 0.0370575
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.446
ELB improved by 0.0404114
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.401
ELB improved by 0.0443177
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.352
ELB improved by 0.0488876
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.298
ELB improved by 0.0542578
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.238
ELB improved by 0.0605968
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.169
ELB improved by 0.0681121
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.092
ELB improved by 0.077058
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.005
ELB improved by 0.0877451
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.904
ELB improved by 0.10055
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.788
ELB improved by 0.115929
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.654
ELB improved by 0.134431
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.497
ELB improved by 0.156728
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.313
ELB improved by 0.183674
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.097
ELB improved by 0.216432
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.84
ELB improved by 0.25673
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.533
ELB improved by 0.307275
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.161
ELB improved by 0.372089
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.705
ELB improved by 0.455523
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.147
ELB improved by 0.557929
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.474
ELB improved by 0.673019
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.671
ELB improved by 0.803105
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.7
ELB improved by 0.970916
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.541
ELB improved by 1.15954
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.277
ELB improved by 1.26368
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.994
ELB improved by 1.28291
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.681
ELB improved by 1.3128
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.349
ELB improved by 1.33187
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.12
ELB improved by 1.22933
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.161
ELB improved by 0.959159
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.499
ELB improved by 0.662435
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.027
ELB improved by 0.471144
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.652
ELB improved by 0.375619
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.329
ELB improved by 0.32291
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.049
ELB improved by 0.279834
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.79
ELB improved by 0.259029
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.523
ELB improved by 0.267118
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.256
ELB improved by 0.266982
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.015
ELB improved by 0.240638
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.798
ELB improved by 0.217546
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.584
ELB improved by 0.214158
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.364
ELB improved by 0.219682
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.15
ELB improved by 0.214209
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.965
ELB improved by 0.185052
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.825
ELB improved by 0.139764
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.727
ELB improved by 0.097481
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.659
ELB improved by 0.0687473
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.606
ELB improved by 0.0526923
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.561
ELB improved by 0.0446535
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.521
ELB improved by 0.040611
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.483
ELB improved by 0.0378953
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.448
ELB improved by 0.0348702
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.417
ELB improved by 0.030803
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.391
ELB improved by 0.0258678
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.37
ELB improved by 0.0208413
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.354
ELB improved by 0.0164992
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.341
ELB improved by 0.0131962
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.33
ELB improved by 0.0108747
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.321
ELB improved by 0.00928994
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.007
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.105
ELB improved by 278.902
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-531.354
ELB improved by 57.7507
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.496
ELB improved by 41.8576
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.365
ELB improved by 22.1307
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.885
ELB improved by 10.4803
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.372
ELB improved by 6.51363
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.58
ELB improved by 5.79122
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.779
ELB improved by 5.8011
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.354
ELB improved by 5.42543
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.065
ELB improved by 4.28893
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.18
ELB improved by 2.88507
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.37
ELB improved by 1.80927
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.207
ELB improved by 1.16389
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.4
ELB improved by 0.806579
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.791
ELB improved by 0.609215
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.291
ELB improved by 0.500061
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.85
ELB improved by 0.441091
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.442
ELB improved by 0.407466
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.06
ELB improved by 0.381691
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.704
ELB improved by 0.356955
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.368
ELB improved by 0.335332
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.049
ELB improved by 0.319397
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.74
ELB improved by 0.308646
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.439
ELB improved by 0.301243
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.143
ELB improved by 0.295722
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.852
ELB improved by 0.291355
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.564
ELB improved by 0.287964
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.278
ELB improved by 0.285682
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.993
ELB improved by 0.28479
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.708
ELB improved by 0.285614
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.419
ELB improved by 0.28846
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.126
ELB improved by 0.29358
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.825
ELB improved by 0.301129
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.513
ELB improved by 0.311132
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.19
ELB improved by 0.323429
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.852
ELB improved by 0.337619
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.499
ELB improved by 0.352996
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.131
ELB improved by 0.368535
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.748
ELB improved by 0.382958
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.353
ELB improved by 0.394968
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.949
ELB improved by 0.403747
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.539
ELB improved by 0.409863
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.122
ELB improved by 0.416952
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.688
ELB improved by 0.434815
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.206
ELB improved by 0.48148
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.645
ELB improved by 0.560863
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.043
ELB improved by 0.601902
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.505
ELB improved by 0.538683
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.074
ELB improved by 0.430368
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.74
ELB improved by 0.334308
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.475
ELB improved by 0.264986
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.248
ELB improved by 0.226891
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.019
ELB improved by 0.229114
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.728
ELB improved by 0.291433
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.311
ELB improved by 0.416978
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.806
ELB improved by 0.504472
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.363
ELB improved by 0.442898
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.066
ELB improved by 0.297064
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.9
ELB improved by 0.165972
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.811
ELB improved by 0.0888813
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.759
ELB improved by 0.0527294
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.722
ELB improved by 0.0364164
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.694
ELB improved by 0.0282807
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.67
ELB improved by 0.0235005
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.65
ELB improved by 0.0202546
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.632
ELB improved by 0.0178351
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.616
ELB improved by 0.0159303
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.602
ELB improved by 0.0143784
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.589
ELB improved by 0.0130837
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.577
ELB improved by 0.0119837
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.566
ELB improved by 0.0110356
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.556
ELB improved by 0.0102088
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.546
ELB improved by 0.00948086
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.575
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.929
ELB improved by 289.646
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-520.407
ELB improved by 62.522
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.183
ELB improved by 40.2241
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.905
ELB improved by 16.2778
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.017
ELB improved by 6.88862
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.423
ELB improved by 4.59381
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.293
ELB improved by 4.12987
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.15
ELB improved by 4.14255
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.99
ELB improved by 4.16071
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.089
ELB improved by 3.90107
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.761
ELB improved by 3.32706
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.094
ELB improved by 2.66759
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.933
ELB improved by 2.16082
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.096
ELB improved by 1.83669
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.533
ELB improved by 1.56307
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.27
ELB improved by 1.26344
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.273
ELB improved by 0.996355
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.447
ELB improved by 0.826527
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.698
ELB improved by 0.748503
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.968
ELB improved by 0.730936
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.212
ELB improved by 0.755377
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.395
ELB improved by 0.817431
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.474
ELB improved by 0.920357
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.402
ELB improved by 1.07274
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.113
ELB improved by 1.2882
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.531
ELB improved by 1.58251
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.57
ELB improved by 1.9608
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.181
ELB improved by 2.38867
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.421
ELB improved by 2.76085
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.507
ELB improved by 2.91321
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.769
ELB improved by 2.73838
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.45
ELB improved by 2.31883
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.637
ELB improved by 1.81298
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.342
ELB improved by 1.29535
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.477
ELB improved by 0.864465
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.899
ELB improved by 0.578678
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.492
ELB improved by 0.406781
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.189
ELB improved by 0.303392
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.948
ELB improved by 0.240227
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.745
ELB improved by 0.203394
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.557
ELB improved by 0.187777
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.363
ELB improved by 0.193857
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.141
ELB improved by 0.222522
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.881
ELB improved by 0.260044
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.611
ELB improved by 0.269926
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.373
ELB improved by 0.237735
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.178
ELB improved by 0.195347
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.01
ELB improved by 0.167951
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.852
ELB improved by 0.157351
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.698
ELB improved by 0.154691
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.552
ELB improved by 0.146118
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.427
ELB improved by 0.124333
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.329
ELB improved by 0.0979027
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.251
ELB improved by 0.0782579
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.183
ELB improved by 0.0683055
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.116
ELB improved by 0.0664244
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.045
ELB improved by 0.070911
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.966
ELB improved by 0.0796892
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.878
ELB improved by 0.0876482
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.792
ELB improved by 0.0866055
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.718
ELB improved by 0.073118
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.664
ELB improved by 0.0539963
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.627
ELB improved by 0.0377817
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.6
ELB improved by 0.0270685
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.579
ELB improved by 0.0205793
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.562
ELB improved by 0.0165967
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.548
ELB improved by 0.0140008
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.536
ELB improved by 0.0121848
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.525
ELB improved by 0.0108325
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.516
ELB improved by 0.00977627
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.823
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-558.635
ELB improved by 308.189
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.817
ELB improved by 62.818
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.547
ELB improved by 38.2693
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.775
ELB improved by 15.7727
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.292
ELB improved by 6.48296
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.652
ELB improved by 3.64007
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.198
ELB improved by 2.45382
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.325
ELB improved by 1.87255
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.713
ELB improved by 1.61201
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.179
ELB improved by 1.53393
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.612
ELB improved by 1.56705
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.941
ELB improved by 1.67125
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.123
ELB improved by 1.81791
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.146
ELB improved by 1.97705
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.036
ELB improved by 2.11044
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.86
ELB improved by 2.17556
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.718
ELB improved by 2.14205
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.715
ELB improved by 2.00314
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.946
ELB improved by 1.76942
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.472
ELB improved by 1.47312
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.291
ELB improved by 1.18164
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.333
ELB improved by 0.957697
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.52
ELB improved by 0.813221
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.792
ELB improved by 0.727533
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.115
ELB improved by 0.677451
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.467
ELB improved by 0.647704
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.836
ELB improved by 0.630947
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.211
ELB improved by 0.625443
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.578
ELB improved by 0.633037
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.92
ELB improved by 0.658167
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.211
ELB improved by 0.708151
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.417
ELB improved by 0.794542
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.485
ELB improved by 0.931671
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.369
ELB improved by 1.11574
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.073
ELB improved by 1.29689
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.596
ELB improved by 1.47664
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.887
ELB improved by 1.70856
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.106
ELB improved by 1.7818
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.471
ELB improved by 1.63453
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.914
ELB improved by 1.55744
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.268
ELB improved by 1.64509
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.352
ELB improved by 1.91619
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.462
ELB improved by 1.89026
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.999
ELB improved by 1.4626
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.998
ELB improved by 1.00121
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.338
ELB improved by 0.659964
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.922
ELB improved by 0.416175
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.663
ELB improved by 0.258621
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.492
ELB improved by 0.171789
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.366
ELB improved by 0.126156
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.265
ELB improved by 0.100434
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.181
ELB improved by 0.0840937
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.108
ELB improved by 0.0725449
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.045
ELB improved by 0.0638029
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.988
ELB improved by 0.0569769
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.936
ELB improved by 0.0516566
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.888
ELB improved by 0.0476724
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.843
ELB improved by 0.045008
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.8
ELB improved by 0.0437795
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.755
ELB improved by 0.044235
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.709
ELB improved by 0.0467248
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.657
ELB improved by 0.0515479
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.599
ELB improved by 0.0585413
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.532
ELB improved by 0.0664609
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.459
ELB improved by 0.0728191
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.384
ELB improved by 0.0751136
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.311
ELB improved by 0.0726574
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.245
ELB improved by 0.0666951
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.186
ELB improved by 0.0589129
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.135
ELB improved by 0.0504703
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.093
ELB improved by 0.0420579
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.059
ELB improved by 0.0341889
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.032
ELB improved by 0.027281
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.01
ELB improved by 0.0215882
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.993
ELB improved by 0.0171544
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.979
ELB improved by 0.0138504
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.968
ELB improved by 0.0114582
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.958
ELB improved by 0.00974712
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.426 0.284 2.699
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.060 | 0.013 | 0.074 | |
| getPIPs | 0.047 | 0.004 | 0.051 | |
| graper | 0.079 | 0.005 | 0.084 | |
| makeExampleData | 0.009 | 0.001 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.001 | 0.013 | |
| plotELBO | 0.324 | 0.017 | 0.341 | |
| plotGroupPenalties | 1.078 | 0.043 | 1.121 | |
| plotPosterior | 0.636 | 0.003 | 0.639 | |
| predict.graper | 2.048 | 0.019 | 2.067 | |
| print.graper | 0.050 | 0.003 | 0.052 | |