Multiple platform build/check report for BioC 3.20 - CHECK results for graper on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4739
palomino8	Windows Server 2022 Datacenter	x64	4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves"	4482
merida1	macOS 12.7.5 Monterey	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4510
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4462
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo2

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.22.0

Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.22.0.tar.gz

StartedAt: 2024-11-29 00:49:21 -0500 (Fri, 29 Nov 2024)

EndedAt: 2024-11-29 00:54:18 -0500 (Fri, 29 Nov 2024)

EllapsedTime: 297.3 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings graper_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
    GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.22.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    libs   5.8Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 4 NOTEs
See
  ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
                 from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
                 from /home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
                 from graper_linear_dense_ff.h:2,
                 from fit_graper.cpp:4:
/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
   23 | #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
      |      ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.20-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.083
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.04
ELB improved by 280.044

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.979
ELB improved by 60.0604

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.836
ELB improved by 42.1429

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.615
ELB improved by 21.2215

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.813
ELB improved by 8.80177

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.084
ELB improved by 4.72956

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.512
ELB improved by 3.57172

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.273
ELB improved by 3.23848

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.959
ELB improved by 3.31396

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.299
ELB improved by 3.6603

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.114
ELB improved by 4.18498

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.436
ELB improved by 4.67804

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.701
ELB improved by 4.73554

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.65
ELB improved by 4.05046

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.775
ELB improved by 2.87557

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.979
ELB improved by 1.79544

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.884
ELB improved by 1.0954

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.178
ELB improved by 0.705782

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.694
ELB improved by 0.483422

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.352
ELB improved by 0.342606

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.104
ELB improved by 0.248332

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.918
ELB improved by 0.185257

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.775
ELB improved by 0.143126

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.661
ELB improved by 0.114429

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.567
ELB improved by 0.0942045

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.487
ELB improved by 0.0793955

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.419
ELB improved by 0.0681556

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.36
ELB improved by 0.0593566

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.307
ELB improved by 0.0522908

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.261
ELB improved by 0.0465001

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.219
ELB improved by 0.0416776

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.182
ELB improved by 0.037611

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.147
ELB improved by 0.0341484

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.116
ELB improved by 0.031178

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.088
ELB improved by 0.0286151

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.061
ELB improved by 0.026394

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.037
ELB improved by 0.0244628

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.014
ELB improved by 0.0227798

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.993
ELB improved by 0.021311

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.973
ELB improved by 0.0200285

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.954
ELB improved by 0.0189092

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.936
ELB improved by 0.0179338

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.919
ELB improved by 0.017086

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.902
ELB improved by 0.0163522

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.887
ELB improved by 0.015721

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.871
ELB improved by 0.0151827

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.857
ELB improved by 0.0147292

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.842
ELB improved by 0.0143537

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.828
ELB improved by 0.0140505

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.814
ELB improved by 0.0138151

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.801
ELB improved by 0.0136435

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.787
ELB improved by 0.013533

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.774
ELB improved by 0.0134813

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.76
ELB improved by 0.0134869

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.747
ELB improved by 0.013549

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.733
ELB improved by 0.0136673

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.719
ELB improved by 0.0138424

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.705
ELB improved by 0.0140753

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.691
ELB improved by 0.0143678

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.676
ELB improved by 0.0147224

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.661
ELB improved by 0.0151423

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.645
ELB improved by 0.0156317

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.629
ELB improved by 0.0161955

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.612
ELB improved by 0.0168398

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.595
ELB improved by 0.0175717

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.576
ELB improved by 0.0183996

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.557
ELB improved by 0.0193333

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.537
ELB improved by 0.0203843

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.515
ELB improved by 0.0215655

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.492
ELB improved by 0.022892

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.468
ELB improved by 0.0243805

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.442
ELB improved by 0.0260501

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.414
ELB improved by 0.0279213

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.384
ELB improved by 0.0300165

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.351
ELB improved by 0.0323592

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.316
ELB improved by 0.0349732

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.279
ELB improved by 0.0378815

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.237
ELB improved by 0.0411047

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.193
ELB improved by 0.0446595

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.144
ELB improved by 0.048557

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.091
ELB improved by 0.0528012

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.034
ELB improved by 0.0573888

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.972
ELB improved by 0.0623098

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.904
ELB improved by 0.0675505

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.831
ELB improved by 0.0730972

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.752
ELB improved by 0.0789416

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.667
ELB improved by 0.0850859

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.576
ELB improved by 0.0915467

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.477
ELB improved by 0.0983574

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.372
ELB improved by 0.105567

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.258
ELB improved by 0.113239

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.137
ELB improved by 0.121445

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.007
ELB improved by 0.13026

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.867
ELB improved by 0.139753

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.717
ELB improved by 0.149988

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.556
ELB improved by 0.161013

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.383
ELB improved by 0.172862

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.197
ELB improved by 0.185552

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.998
ELB improved by 0.199072

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.785
ELB improved by 0.213317

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.557
ELB improved by 0.227938

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.315
ELB improved by 0.242048

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.061
ELB improved by 0.253882

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.801
ELB improved by 0.260716

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.541
ELB improved by 0.259577

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.292
ELB improved by 0.248757

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.063
ELB improved by 0.229103

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.859
ELB improved by 0.203712

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.683
ELB improved by 0.176261

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.534
ELB improved by 0.149566

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.408
ELB improved by 0.125227

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.304
ELB improved by 0.103911

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.219
ELB improved by 0.0857363

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.148
ELB improved by 0.0705269

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.09
ELB improved by 0.0579634

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.042
ELB improved by 0.0476737

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.003
ELB improved by 0.0392876

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.971
ELB improved by 0.0324678

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.944
ELB improved by 0.0269227

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.921
ELB improved by 0.0224096

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.903
ELB improved by 0.0187308

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.887
ELB improved by 0.0157271

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.874
ELB improved by 0.0132711

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.862
ELB improved by 0.0112605

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.853
ELB improved by 0.009613

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-897.07
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-603.976
ELB improved by 293.095

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.642
ELB improved by 59.334

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.758
ELB improved by 47.8835

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.972
ELB improved by 25.7862

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.146
ELB improved by 9.82537

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.715
ELB improved by 4.43136

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.773
ELB improved by 2.94203

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.431
ELB improved by 2.34247

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.385
ELB improved by 2.04579

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.531
ELB improved by 1.85337

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.842
ELB improved by 1.68968

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.308
ELB improved by 1.53374

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.927
ELB improved by 1.38111

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.695
ELB improved by 1.23179

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.608
ELB improved by 1.0873

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.658
ELB improved by 0.949901

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.836
ELB improved by 0.821953

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.131
ELB improved by 0.704949

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.532
ELB improved by 0.5992

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.027
ELB improved by 0.504457

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.607
ELB improved by 0.420711

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.258
ELB improved by 0.348241

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.971
ELB improved by 0.28712

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.734
ELB improved by 0.236827

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.538
ELB improved by 0.196263

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.374
ELB improved by 0.163983

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.236
ELB improved by 0.138463

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.117
ELB improved by 0.118289

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.015
ELB improved by 0.102254

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.926
ELB improved by 0.0893855

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.847
ELB improved by 0.0789299

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.777
ELB improved by 0.0703158

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.713
ELB improved by 0.0631175

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.656
ELB improved by 0.0570199

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.605
ELB improved by 0.0517895

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.557
ELB improved by 0.0472529

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.514
ELB improved by 0.0432802

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.474
ELB improved by 0.0397725

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.438
ELB improved by 0.0366538

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.404
ELB improved by 0.0338647

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.372
ELB improved by 0.0313578

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.343
ELB improved by 0.0290952

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.316
ELB improved by 0.0270456

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.291
ELB improved by 0.025183

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.268
ELB improved by 0.0234859

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.246
ELB improved by 0.0219356

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.225
ELB improved by 0.0205163

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.206
ELB improved by 0.0192145

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.188
ELB improved by 0.0180181

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.171
ELB improved by 0.0169169

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.155
ELB improved by 0.0159017

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.14
ELB improved by 0.0149644

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.126
ELB improved by 0.0140978

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.113
ELB improved by 0.0132957

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.1
ELB improved by 0.0125522

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.088
ELB improved by 0.0118623

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.077
ELB improved by 0.0112215

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.067
ELB improved by 0.0106256

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.056
ELB improved by 0.0100709

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.047
ELB improved by 0.00955416

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.625
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.755
ELB improved by 259.869

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.261
ELB improved by 61.494

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.484
ELB improved by 48.777

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.82
ELB improved by 26.664

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.361
ELB improved by 12.4593

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.414
ELB improved by 6.94686

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.03
ELB improved by 5.38354

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.794
ELB improved by 5.23657

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.449
ELB improved by 5.34461

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.295
ELB improved by 5.15402

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.878
ELB improved by 4.4171

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.549
ELB improved by 3.32903

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.222
ELB improved by 2.32702

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.559
ELB improved by 1.66348

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.239
ELB improved by 1.3199

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.048
ELB improved by 1.19026

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.877
ELB improved by 1.17171

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.708
ELB improved by 1.16864

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.565
ELB improved by 1.14286

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.456
ELB improved by 1.1094

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.384
ELB improved by 1.07209

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.358
ELB improved by 1.02575

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.388
ELB improved by 0.97046

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.478
ELB improved by 0.909071

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.635
ELB improved by 0.843478

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.86
ELB improved by 0.775095

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.154
ELB improved by 0.70592

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.515
ELB improved by 0.638656

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.939
ELB improved by 0.576245

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.418
ELB improved by 0.521316

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.942
ELB improved by 0.475931

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.5
ELB improved by 0.441728

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.08
ELB improved by 0.420115

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.668
ELB improved by 0.411533

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.256
ELB improved by 0.4127

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.842
ELB improved by 0.414226

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.435
ELB improved by 0.406582

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.046
ELB improved by 0.388661

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.686
ELB improved by 0.360412

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.368
ELB improved by 0.318068

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.103
ELB improved by 0.264465

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.893
ELB improved by 0.21025

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.729
ELB improved by 0.164122

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.6
ELB improved by 0.128514

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.498
ELB improved by 0.102289

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.415
ELB improved by 0.0836664

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.343
ELB improved by 0.0711467

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.28
ELB improved by 0.0634161

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.221
ELB improved by 0.0590905

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.164
ELB improved by 0.0566073

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.11
ELB improved by 0.0544233

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.058
ELB improved by 0.0515011

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.011
ELB improved by 0.0476784

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.967
ELB improved by 0.0434788

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.928
ELB improved by 0.0395174

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.892
ELB improved by 0.036036

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.859
ELB improved by 0.0328197

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.829
ELB improved by 0.0294156

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.804
ELB improved by 0.0254898

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.783
ELB improved by 0.0211095

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.766
ELB improved by 0.0167259

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.753
ELB improved by 0.0128654

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.743
ELB improved by 0.00982572

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.535
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.677
ELB improved by 278.858

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.007
ELB improved by 54.67

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.362
ELB improved by 35.6452

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.829
ELB improved by 15.5335

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.59
ELB improved by 6.23855

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.616
ELB improved by 3.97367

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.921
ELB improved by 3.6958

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.044
ELB improved by 3.87652

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.803
ELB improved by 4.24138

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.174
ELB improved by 4.6289

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.424
ELB improved by 4.74955

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.125
ELB improved by 4.29908

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.814
ELB improved by 3.31107

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.611
ELB improved by 2.20328

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.249
ELB improved by 1.36194

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.39
ELB improved by 0.858508

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.806
ELB improved by 0.584364

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.374
ELB improved by 0.43251

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.031
ELB improved by 0.342125

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.747
ELB improved by 0.283907

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.504
ELB improved by 0.243898

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.289
ELB improved by 0.215043

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.095
ELB improved by 0.193481

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.918
ELB improved by 0.176948

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.754
ELB improved by 0.164035

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.6
ELB improved by 0.153824

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.455
ELB improved by 0.145687

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.315
ELB improved by 0.139176

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.181
ELB improved by 0.133959

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.052
ELB improved by 0.129778

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.925
ELB improved by 0.126428

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.801
ELB improved by 0.123747

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.68
ELB improved by 0.121609

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.56
ELB improved by 0.11993

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.441
ELB improved by 0.118676

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.323
ELB improved by 0.117876

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.206
ELB improved by 0.117643

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.088
ELB improved by 0.118198

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.968
ELB improved by 0.119907

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.844
ELB improved by 0.123316

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.715
ELB improved by 0.129187

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.577
ELB improved by 0.13847

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.425
ELB improved by 0.152132

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.254
ELB improved by 0.170753

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.06
ELB improved by 0.193927

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.84
ELB improved by 0.219903

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.594
ELB improved by 0.245999

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.324
ELB improved by 0.269783

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.034
ELB improved by 0.290164

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.727
ELB improved by 0.307251

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.405
ELB improved by 0.321275

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.073
ELB improved by 0.332086

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.734
ELB improved by 0.33951

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.39
ELB improved by 0.343785

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.044
ELB improved by 0.345604

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.699
ELB improved by 0.345889

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.353
ELB improved by 0.345487

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.008
ELB improved by 0.344962

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.664
ELB improved by 0.344489

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.32
ELB improved by 0.343846

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.977
ELB improved by 0.342471

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.638
ELB improved by 0.339575

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.303
ELB improved by 0.334278

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.978
ELB improved by 0.325774

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.664
ELB improved by 0.313501

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.367
ELB improved by 0.297303

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.089
ELB improved by 0.277584

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.834
ELB improved by 0.255483

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.601
ELB improved by 0.23315

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.386
ELB improved by 0.214258

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.182
ELB improved by 0.204612

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.971
ELB improved by 0.210534

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.743
ELB improved by 0.228028

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.513
ELB improved by 0.229917

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.316
ELB improved by 0.197729

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.163
ELB improved by 0.15279

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.048
ELB improved by 0.115055

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.961
ELB improved by 0.0865954

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.896
ELB improved by 0.0651531

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.847
ELB improved by 0.0491601

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.809
ELB improved by 0.0374371

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.781
ELB improved by 0.0289132

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.758
ELB improved by 0.0226942

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.74
ELB improved by 0.0181119

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.725
ELB improved by 0.014696

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.713
ELB improved by 0.0121221

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.703
ELB improved by 0.0101649

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.694
ELB improved by 0.00866465

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  1.768   0.134   1.892

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.052	0.001	0.053
getPIPs	0.050	0.000	0.049
graper	0.077	0.005	0.081
makeExampleData	0.009	0.000	0.010
makeExampleDataWithUnequalGroups	0.012	0.001	0.012
plotELBO	0.186	0.019	0.205
plotGroupPenalties	0.682	0.024	0.708
plotPosterior	0.586	0.019	0.607
predict.graper	2.058	0.007	2.065
print.graper	0.046	0.006	0.052