Britta Velten
| Snapshot Date: 2024-08-07 14:00 -0400 (Wed, 07 Aug 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-08-09 17:38 -0400 (Fri, 09 Aug 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4758 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4493 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4522 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4471 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-08-08 00:22:17 -0400 (Thu, 08 Aug 2024) |
| EndedAt: 2024-08-08 00:23:40 -0400 (Thu, 08 Aug 2024) |
| EllapsedTime: 83.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.20.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/bbs-3.19-bioc/R/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.19-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.19-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.19-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.19-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-847.084
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-561.01
ELB improved by 286.074
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-499.938
ELB improved by 61.0717
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.512
ELB improved by 37.4262
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.107
ELB improved by 16.4041
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.917
ELB improved by 7.19085
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.257
ELB improved by 4.65915
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.342
ELB improved by 3.91559
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.655
ELB improved by 3.68646
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.993
ELB improved by 3.66218
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.325
ELB improved by 3.66872
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.754
ELB improved by 3.57017
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.484
ELB improved by 3.27054
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.709
ELB improved by 2.7752
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.513
ELB improved by 2.19552
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.858
ELB improved by 1.65485
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.646
ELB improved by 1.2119
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.771
ELB improved by 0.875245
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.133
ELB improved by 0.638098
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.65
ELB improved by 0.483102
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.264
ELB improved by 0.385876
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.939
ELB improved by 0.32455
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.655
ELB improved by 0.284756
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.396
ELB improved by 0.258541
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.155
ELB improved by 0.241662
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.923
ELB improved by 0.231701
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.696
ELB improved by 0.227163
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.469
ELB improved by 0.227078
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.238
ELB improved by 0.230815
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400
ELB improved by 0.237955
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.752
ELB improved by 0.248186
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.49
ELB improved by 0.261225
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.214
ELB improved by 0.276783
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.919
ELB improved by 0.294619
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.604
ELB improved by 0.314721
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.267
ELB improved by 0.337611
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.902
ELB improved by 0.364692
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.503
ELB improved by 0.398588
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.06
ELB improved by 0.443491
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.554
ELB improved by 0.505679
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.96
ELB improved by 0.594082
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.242
ELB improved by 0.718641
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.364
ELB improved by 0.877524
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.334
ELB improved by 1.02962
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.225
ELB improved by 1.10949
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.129
ELB improved by 1.09633
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.124
ELB improved by 1.00495
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.266
ELB improved by 0.857772
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.577
ELB improved by 0.688644
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.046
ELB improved by 0.531528
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.64
ELB improved by 0.405631
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.326
ELB improved by 0.314506
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.072
ELB improved by 0.253473
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.857
ELB improved by 0.215421
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.665
ELB improved by 0.192111
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.491
ELB improved by 0.173131
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.343
ELB improved by 0.148122
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.228
ELB improved by 0.114958
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.147
ELB improved by 0.0817264
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.09
ELB improved by 0.0562246
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.051
ELB improved by 0.0395675
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.022
ELB improved by 0.0292369
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.999
ELB improved by 0.0226828
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.981
ELB improved by 0.0182953
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.965
ELB improved by 0.0151945
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.952
ELB improved by 0.0129067
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.941
ELB improved by 0.011164
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.932
ELB improved by 0.00980374
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-904.413
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-595.953
ELB improved by 308.459
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-535.25
ELB improved by 60.7033
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.775
ELB improved by 42.4748
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.206
ELB improved by 19.5692
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.07
ELB improved by 8.13569
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.982
ELB improved by 5.08782
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.284
ELB improved by 4.69804
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.284
ELB improved by 5.00008
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.862
ELB improved by 5.42203
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.331
ELB improved by 5.53099
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.347
ELB improved by 4.98403
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.466
ELB improved by 3.88124
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.788
ELB improved by 2.67771
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.039
ELB improved by 1.7496
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.86
ELB improved by 1.17833
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.995
ELB improved by 0.864999
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.306
ELB improved by 0.689781
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.735
ELB improved by 0.57105
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.264
ELB improved by 0.470452
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.38033
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.578
ELB improved by 0.305629
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.329
ELB improved by 0.249622
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.119
ELB improved by 0.209978
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.937
ELB improved by 0.182099
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.774
ELB improved by 0.162089
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.627
ELB improved by 0.147394
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.491
ELB improved by 0.136462
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.362
ELB improved by 0.128347
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.24
ELB improved by 0.122449
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.121
ELB improved by 0.118368
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.006
ELB improved by 0.11583
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.891
ELB improved by 0.114637
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.776
ELB improved by 0.114642
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.661
ELB improved by 0.115725
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.543
ELB improved by 0.117774
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.422
ELB improved by 0.120668
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.298
ELB improved by 0.124262
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.169
ELB improved by 0.128377
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.037
ELB improved by 0.132803
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.899
ELB improved by 0.137308
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.758
ELB improved by 0.141654
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.612
ELB improved by 0.145618
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.463
ELB improved by 0.149007
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.311
ELB improved by 0.151679
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.158
ELB improved by 0.153546
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.003
ELB improved by 0.154588
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.848
ELB improved by 0.154847
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.694
ELB improved by 0.154409
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.541
ELB improved by 0.153377
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.389
ELB improved by 0.151841
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.239
ELB improved by 0.149859
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.091
ELB improved by 0.147465
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.947
ELB improved by 0.1447
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.805
ELB improved by 0.141631
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.667
ELB improved by 0.138358
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.532
ELB improved by 0.134986
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.4
ELB improved by 0.131599
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.272
ELB improved by 0.12824
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.147
ELB improved by 0.124913
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.025
ELB improved by 0.121588
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.907
ELB improved by 0.118214
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.793
ELB improved by 0.114734
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.681
ELB improved by 0.111094
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.574
ELB improved by 0.107255
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.471
ELB improved by 0.103198
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.372
ELB improved by 0.0989336
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.278
ELB improved by 0.0944936
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.188
ELB improved by 0.0899325
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.102
ELB improved by 0.0853182
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.022
ELB improved by 0.0807249
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.945
ELB improved by 0.0762266
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.873
ELB improved by 0.0718921
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.806
ELB improved by 0.0677818
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.742
ELB improved by 0.0639461
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.681
ELB improved by 0.0604251
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.624
ELB improved by 0.0572479
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.57
ELB improved by 0.0544332
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.518
ELB improved by 0.0519887
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.468
ELB improved by 0.0499111
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.42
ELB improved by 0.0481848
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.373
ELB improved by 0.0467808
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.327
ELB improved by 0.0456561
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.282
ELB improved by 0.0447523
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.238
ELB improved by 0.0439965
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.195
ELB improved by 0.0433035
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.152
ELB improved by 0.0425811
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.111
ELB improved by 0.0417386
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.07
ELB improved by 0.0406964
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.031
ELB improved by 0.0393962
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.993
ELB improved by 0.0378081
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.957
ELB improved by 0.0359341
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.923
ELB improved by 0.0338054
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.892
ELB improved by 0.0314768
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.863
ELB improved by 0.0290175
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.836
ELB improved by 0.0265023
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.812
ELB improved by 0.0240028
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.79
ELB improved by 0.0215819
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.771
ELB improved by 0.0192894
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.754
ELB improved by 0.0171609
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.739
ELB improved by 0.0152181
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.725
ELB improved by 0.0134705
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.713
ELB improved by 0.0119173
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.703
ELB improved by 0.0105507
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.694
ELB improved by 0.00935777
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.377
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-599.817
ELB improved by 293.56
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-541.992
ELB improved by 57.8249
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.024
ELB improved by 43.9676
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.523
ELB improved by 22.501
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.421
ELB improved by 10.102
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.948
ELB improved by 7.47288
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.021
ELB improved by 7.92712
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.685
ELB improved by 8.33651
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.248
ELB improved by 7.43648
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.919
ELB improved by 5.32905
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.635
ELB improved by 3.28403
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.627
ELB improved by 2.00765
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.282
ELB improved by 1.34507
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.276
ELB improved by 1.00622
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.454
ELB improved by 0.821985
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.747
ELB improved by 0.70746
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.118
ELB improved by 0.62866
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.536
ELB improved by 0.582001
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.969
ELB improved by 0.567065
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.391
ELB improved by 0.578349
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.784
ELB improved by 0.606129
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.148
ELB improved by 0.636314
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.488
ELB improved by 0.659802
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.81
ELB improved by 0.678664
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.113
ELB improved by 0.696848
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.398
ELB improved by 0.714906
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.666
ELB improved by 0.731529
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.922
ELB improved by 0.74442
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.172
ELB improved by 0.750277
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.427
ELB improved by 0.745178
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.701
ELB improved by 0.725778
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.01
ELB improved by 0.690936
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.367
ELB improved by 0.64288
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.78
ELB improved by 0.586988
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.25
ELB improved by 0.530086
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.772
ELB improved by 0.478022
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.338
ELB improved by 0.433363
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.945
ELB improved by 0.393688
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.593
ELB improved by 0.352166
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.289
ELB improved by 0.303263
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.04
ELB improved by 0.249368
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.842
ELB improved by 0.198253
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.686
ELB improved by 0.155432
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.564
ELB improved by 0.122013
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.468
ELB improved by 0.0967399
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.39
ELB improved by 0.0778013
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.326
ELB improved by 0.0635889
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.273
ELB improved by 0.0528647
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.229
ELB improved by 0.0447175
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.19
ELB improved by 0.0384809
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.156
ELB improved by 0.0336656
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.127
ELB improved by 0.0299118
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.1
ELB improved by 0.0269553
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.075
ELB improved by 0.0246028
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.052
ELB improved by 0.022714
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.031
ELB improved by 0.0211868
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.011
ELB improved by 0.0199477
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.992
ELB improved by 0.0189441
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.974
ELB improved by 0.0181386
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.957
ELB improved by 0.0175054
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.939
ELB improved by 0.0170279
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.923
ELB improved by 0.0166961
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.906
ELB improved by 0.0165067
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.89
ELB improved by 0.0164617
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.873
ELB improved by 0.0165693
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.856
ELB improved by 0.0168454
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.839
ELB improved by 0.0173172
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.821
ELB improved by 0.0180294
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.802
ELB improved by 0.0190571
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.781
ELB improved by 0.0205281
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.759
ELB improved by 0.0226622
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.733
ELB improved by 0.0258434
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.702
ELB improved by 0.0307537
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.664
ELB improved by 0.0386375
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.612
ELB improved by 0.051861
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.537
ELB improved by 0.0751764
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.418
ELB improved by 0.118555
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.216
ELB improved by 0.202113
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.858
ELB improved by 0.357584
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.245
ELB improved by 0.613102
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.298
ELB improved by 0.947337
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.16
ELB improved by 1.13813
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.032
ELB improved by 1.12794
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.987
ELB improved by 1.04479
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.217
ELB improved by 0.769999
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.693
ELB improved by 0.523502
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.235
ELB improved by 0.458023
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.831
ELB improved by 0.404731
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.572
ELB improved by 0.25835
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.442
ELB improved by 0.130851
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.376
ELB improved by 0.0655731
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.339
ELB improved by 0.0368082
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.315
ELB improved by 0.0239127
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.298
ELB improved by 0.0174528
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.284
ELB improved by 0.0137038
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.273
ELB improved by 0.0112585
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.263
ELB improved by 0.00954987
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-886.129
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-601.08
ELB improved by 285.049
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.57
ELB improved by 61.5099
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-495.624
ELB improved by 43.9453
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.189
ELB improved by 21.4352
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.776
ELB improved by 9.41344
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.416
ELB improved by 6.36
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.273
ELB improved by 6.14234
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.607
ELB improved by 6.66619
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.507
ELB improved by 7.10025
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.757
ELB improved by 6.7503
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.302
ELB improved by 5.45479
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.445
ELB improved by 3.85722
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.846
ELB improved by 2.59866
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.047
ELB improved by 1.79946
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.714
ELB improved by 1.33268
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.646
ELB improved by 1.06761
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.738
ELB improved by 0.908625
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.96
ELB improved by 0.777288
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.319
ELB improved by 0.641595
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.794
ELB improved by 0.524735
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.354
ELB improved by 0.439882
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.977
ELB improved by 0.3767
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.653
ELB improved by 0.324105
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.374
ELB improved by 0.278965
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.132
ELB improved by 0.242299
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.918
ELB improved by 0.21422
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.725
ELB improved by 0.193147
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.548
ELB improved by 0.177107
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.383
ELB improved by 0.164555
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.229
ELB improved by 0.154492
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.082
ELB improved by 0.146317
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.943
ELB improved by 0.13967
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.808
ELB improved by 0.134325
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.678
ELB improved by 0.130126
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.551
ELB improved by 0.12694
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.427
ELB improved by 0.124623
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.304
ELB improved by 0.122999
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.182
ELB improved by 0.121849
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.061
ELB improved by 0.120926
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.941
ELB improved by 0.12
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.822
ELB improved by 0.118902
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.704
ELB improved by 0.117566
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.588
ELB improved by 0.116025
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.474
ELB improved by 0.114381
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.361
ELB improved by 0.112761
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.25
ELB improved by 0.111285
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.14
ELB improved by 0.110056
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.031
ELB improved by 0.109155
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.922
ELB improved by 0.108651
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.813
ELB improved by 0.108614
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.704
ELB improved by 0.109133
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.594
ELB improved by 0.110337
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.481
ELB improved by 0.112428
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.366
ELB improved by 0.115735
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.245
ELB improved by 0.1208
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.116
ELB improved by 0.128534
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.976
ELB improved by 0.140501
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.817
ELB improved by 0.159381
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.627
ELB improved by 0.189541
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.39
ELB improved by 0.236823
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.085
ELB improved by 0.305048
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.693
ELB improved by 0.391688
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.183
ELB improved by 0.510168
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.43
ELB improved by 0.753183
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.22
ELB improved by 1.2096
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.804
ELB improved by 1.41653
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.669
ELB improved by 1.13482
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.842
ELB improved by 0.827111
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.255
ELB improved by 0.586554
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.855
ELB improved by 0.400549
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.571
ELB improved by 0.284431
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.356
ELB improved by 0.214082
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.193
ELB improved by 0.163229
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.071
ELB improved by 0.122354
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.981
ELB improved by 0.0901903
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.914
ELB improved by 0.0664319
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.864
ELB improved by 0.04984
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.826
ELB improved by 0.0386553
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.794
ELB improved by 0.0312421
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.768
ELB improved by 0.0263704
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.745
ELB improved by 0.0232103
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.724
ELB improved by 0.0212242
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.704
ELB improved by 0.0200546
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.684
ELB improved by 0.0194346
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.665
ELB improved by 0.0191255
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.646
ELB improved by 0.0188837
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.628
ELB improved by 0.0184664
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.61
ELB improved by 0.0176797
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.594
ELB improved by 0.0164464
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.579
ELB improved by 0.0148406
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.566
ELB improved by 0.013049
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.554
ELB improved by 0.0112791
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.545
ELB improved by 0.00967926
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.109 0.159 2.258
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.064 | 0.006 | 0.071 | |
| getPIPs | 0.045 | 0.020 | 0.064 | |
| graper | 0.091 | 0.012 | 0.103 | |
| makeExampleData | 0.010 | 0.000 | 0.011 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.182 | 0.048 | 0.231 | |
| plotGroupPenalties | 0.715 | 0.012 | 0.728 | |
| plotPosterior | 0.481 | 0.016 | 0.497 | |
| predict.graper | 2.057 | 0.076 | 2.134 | |
| print.graper | 0.038 | 0.023 | 0.061 | |