Britta Velten
| Snapshot Date: 2026-05-20 13:40 -0400 (Wed, 20 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_23 |
| git_last_commit: 7354ec6 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-05-21 11:32 -0400 (Thu, 21 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4995 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 944/2418 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.28.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.28.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz |
| StartedAt: 2026-05-21 00:43:52 -0400 (Thu, 21 May 2026) |
| EndedAt: 2026-05-21 00:45:24 -0400 (Thu, 21 May 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.28.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-21 04:43:53 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.28.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.28.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.316
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-558.939
ELB improved by 317.378
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.246
ELB improved by 57.6933
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.094
ELB improved by 31.1515
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.072
ELB improved by 13.0218
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.523
ELB improved by 6.54937
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.833
ELB improved by 4.69008
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.58
ELB improved by 4.25299
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.252
ELB improved by 4.32742
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.718
ELB improved by 4.53471
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.132
ELB improved by 4.58531
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.851
ELB improved by 4.2811
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.188
ELB improved by 3.66313
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.22
ELB improved by 2.96826
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.872
ELB improved by 2.34783
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.098
ELB improved by 1.774
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.835
ELB improved by 1.26291
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.952
ELB improved by 0.883495
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.316
ELB improved by 0.635879
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.834
ELB improved by 0.481907
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.448
ELB improved by 0.385412
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.126
ELB improved by 0.322345
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.847
ELB improved by 0.278934
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.6
ELB improved by 0.24767
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.375
ELB improved by 0.224393
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.168
ELB improved by 0.206677
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.975
ELB improved by 0.193012
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.793
ELB improved by 0.182405
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.619
ELB improved by 0.174163
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.451
ELB improved by 0.167792
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.288
ELB improved by 0.162927
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.129
ELB improved by 0.159293
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.972
ELB improved by 0.156683
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.817
ELB improved by 0.154938
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.663
ELB improved by 0.153931
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.51
ELB improved by 0.153552
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.356
ELB improved by 0.153699
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.202
ELB improved by 0.154263
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.047
ELB improved by 0.15512
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.891
ELB improved by 0.156123
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.733
ELB improved by 0.157108
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.576
ELB improved by 0.157897
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.417
ELB improved by 0.158318
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.259
ELB improved by 0.158217
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.102
ELB improved by 0.15747
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.946
ELB improved by 0.155985
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.792
ELB improved by 0.1537
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.641
ELB improved by 0.150578
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.495
ELB improved by 0.146603
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.353
ELB improved by 0.141787
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.217
ELB improved by 0.136173
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.087
ELB improved by 0.129837
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.964
ELB improved by 0.122892
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.849
ELB improved by 0.11548
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.741
ELB improved by 0.10777
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.641
ELB improved by 0.0999398
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.549
ELB improved by 0.0921686
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.464
ELB improved by 0.0846232
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.387
ELB improved by 0.0774506
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.316
ELB improved by 0.0707733
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.251
ELB improved by 0.0646892
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.192
ELB improved by 0.0592737
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.137
ELB improved by 0.0545852
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.087
ELB improved by 0.05067
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.039
ELB improved by 0.0475684
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.994
ELB improved by 0.0453184
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.95
ELB improved by 0.0439575
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.906
ELB improved by 0.0435207
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.862
ELB improved by 0.0440353
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.817
ELB improved by 0.0455133
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.769
ELB improved by 0.0479419
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.717
ELB improved by 0.0512769
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.662
ELB improved by 0.0554409
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.602
ELB improved by 0.0603309
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.536
ELB improved by 0.0658338
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.464
ELB improved by 0.071845
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.386
ELB improved by 0.0782793
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.301
ELB improved by 0.0850486
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.209
ELB improved by 0.091972
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.11
ELB improved by 0.0985993
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.006
ELB improved by 0.10403
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.899
ELB improved by 0.106974
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.793
ELB improved by 0.106302
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.691
ELB improved by 0.101811
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.597
ELB improved by 0.094469
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.511
ELB improved by 0.0858284
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.433
ELB improved by 0.0772096
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.364
ELB improved by 0.0693386
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.302
ELB improved by 0.0624391
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.245
ELB improved by 0.0564665
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.194
ELB improved by 0.0512823
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.147
ELB improved by 0.0467415
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.104
ELB improved by 0.0427235
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.065
ELB improved by 0.0391364
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.029
ELB improved by 0.0359121
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.996
ELB improved by 0.0329998
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.966
ELB improved by 0.0303608
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.938
ELB improved by 0.027964
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.912
ELB improved by 0.0257838
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.889
ELB improved by 0.0237982
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.867
ELB improved by 0.0219882
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.846
ELB improved by 0.0203367
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.827
ELB improved by 0.0188287
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.81
ELB improved by 0.0174505
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.794
ELB improved by 0.0161898
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.779
ELB improved by 0.0150357
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.765
ELB improved by 0.0139781
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.752
ELB improved by 0.0130081
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.74
ELB improved by 0.0121176
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.728
ELB improved by 0.0112993
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.718
ELB improved by 0.0105465
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.708
ELB improved by 0.00985345
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-850.699
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.374
ELB improved by 278.325
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.046
ELB improved by 60.3277
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.022
ELB improved by 43.0241
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.139
ELB improved by 19.8826
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.088
ELB improved by 8.05147
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.459
ELB improved by 4.62917
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.932
ELB improved by 3.52698
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.668
ELB improved by 3.26305
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.244
ELB improved by 3.42422
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.374
ELB improved by 3.87062
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.871
ELB improved by 4.50248
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.79
ELB improved by 5.08073
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.59
ELB improved by 5.20011
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.924
ELB improved by 4.66645
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.074
ELB improved by 3.8498
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.97
ELB improved by 3.10393
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.727
ELB improved by 2.24291
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.328
ELB improved by 1.39934
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.519
ELB improved by 0.808525
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.045
ELB improved by 0.474694
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.741
ELB improved by 0.303299
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.527
ELB improved by 0.214442
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.362
ELB improved by 0.164937
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.227
ELB improved by 0.134742
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.113
ELB improved by 0.114744
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.012
ELB improved by 0.100598
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.922
ELB improved by 0.0900751
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.84
ELB improved by 0.0819449
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.764
ELB improved by 0.0754901
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.694
ELB improved by 0.0702736
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.628
ELB improved by 0.0660208
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.566
ELB improved by 0.0625577
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.506
ELB improved by 0.0597768
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.448
ELB improved by 0.0576196
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.392
ELB improved by 0.05607
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.337
ELB improved by 0.0551556
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.282
ELB improved by 0.0549587
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.226
ELB improved by 0.0556404
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.169
ELB improved by 0.0574853
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.108
ELB improved by 0.0609805
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.041
ELB improved by 0.0669429
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.964
ELB improved by 0.0766785
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.872
ELB improved by 0.0919837
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.758
ELB improved by 0.114235
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.617
ELB improved by 0.1411
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.455
ELB improved by 0.162266
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.29
ELB improved by 0.165126
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.138
ELB improved by 0.151686
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.001
ELB improved by 0.136415
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.874
ELB improved by 0.127735
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.748
ELB improved by 0.125433
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.621
ELB improved by 0.127295
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.489
ELB improved by 0.131931
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.35
ELB improved by 0.138699
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.203
ELB improved by 0.147217
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.046
ELB improved by 0.15706
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.878
ELB improved by 0.167643
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.7
ELB improved by 0.178256
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.512
ELB improved by 0.18823
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.315
ELB improved by 0.197094
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.11
ELB improved by 0.204587
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.9
ELB improved by 0.210533
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.685
ELB improved by 0.214705
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.468
ELB improved by 0.216786
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.252
ELB improved by 0.216419
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.039
ELB improved by 0.213299
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.831
ELB improved by 0.207257
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.633
ELB improved by 0.198334
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.446
ELB improved by 0.186812
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.273
ELB improved by 0.173195
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.115
ELB improved by 0.158147
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.972
ELB improved by 0.142406
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.846
ELB improved by 0.126673
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.734
ELB improved by 0.111541
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.637
ELB improved by 0.0974462
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.552
ELB improved by 0.0846626
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.479
ELB improved by 0.0733221
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.415
ELB improved by 0.0634474
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.36
ELB improved by 0.054987
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.312
ELB improved by 0.0478457
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.271
ELB improved by 0.0419081
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.233
ELB improved by 0.0370549
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.2
ELB improved by 0.0331727
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.17
ELB improved by 0.03016
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.142
ELB improved by 0.0279273
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.116
ELB improved by 0.0263946
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.09
ELB improved by 0.0254842
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.065
ELB improved by 0.0251087
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.04
ELB improved by 0.0251557
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.015
ELB improved by 0.0254732
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.989
ELB improved by 0.0258628
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.963
ELB improved by 0.0260944
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.937
ELB improved by 0.0259482
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.911
ELB improved by 0.0252768
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.887
ELB improved by 0.0240565
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.865
ELB improved by 0.0223926
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.845
ELB improved by 0.0204718
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.826
ELB improved by 0.0184904
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.809
ELB improved by 0.016599
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.795
ELB improved by 0.0148821
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.781
ELB improved by 0.0133681
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.769
ELB improved by 0.0120502
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.758
ELB improved by 0.0109053
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.748
ELB improved by 0.00990637
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-874.981
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-571.107
ELB improved by 303.875
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.911
ELB improved by 63.1954
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.495
ELB improved by 44.4166
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.748
ELB improved by 21.7468
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.674
ELB improved by 9.07434
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.685
ELB improved by 4.98858
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.246
ELB improved by 3.43903
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.499
ELB improved by 2.74702
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.022
ELB improved by 2.47686
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.598
ELB improved by 2.42389
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.091
ELB improved by 2.50696
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.375
ELB improved by 2.71664
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.293
ELB improved by 3.08206
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.662
ELB improved by 3.63102
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.355
ELB improved by 4.3066
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.522
ELB improved by 4.83277
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.786
ELB improved by 4.73653
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.931
ELB improved by 3.8547
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.209
ELB improved by 2.72228
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.301
ELB improved by 1.90726
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.831
ELB improved by 1.47086
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.581
ELB improved by 1.24992
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.461
ELB improved by 1.11953
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.441
ELB improved by 1.02051
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.51
ELB improved by 0.93083
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.665
ELB improved by 0.84489
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.902
ELB improved by 0.762845
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.216
ELB improved by 0.685837
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.602
ELB improved by 0.614454
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.053
ELB improved by 0.548663
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.565
ELB improved by 0.4882
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.132
ELB improved by 0.432911
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.749
ELB improved by 0.38288
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.411
ELB improved by 0.338356
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.111
ELB improved by 0.299582
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.844
ELB improved by 0.266619
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.605
ELB improved by 0.23921
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.389
ELB improved by 0.216677
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.191
ELB improved by 0.197893
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.009
ELB improved by 0.181442
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.843
ELB improved by 0.166097
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.692
ELB improved by 0.151498
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.553
ELB improved by 0.138627
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.423
ELB improved by 0.129901
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.294
ELB improved by 0.129403
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.15
ELB improved by 0.143985
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.966
ELB improved by 0.183496
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.719
ELB improved by 0.247067
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.431
ELB improved by 0.287751
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-368.171
ELB improved by 0.260862
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.95
ELB improved by 0.220873
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.718
ELB improved by 0.231985
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-367.4
ELB improved by 0.317951
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.984
ELB improved by 0.415972
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.606
ELB improved by 0.377592
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.349
ELB improved by 0.256976
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.184
ELB improved by 0.165656
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-366.071
ELB improved by 0.112686
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.988
ELB improved by 0.0825158
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.925
ELB improved by 0.063818
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.874
ELB improved by 0.0505367
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.834
ELB improved by 0.0401073
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.802
ELB improved by 0.0317433
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.777
ELB improved by 0.0252255
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.757
ELB improved by 0.0203325
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.74
ELB improved by 0.0167438
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.726
ELB improved by 0.014119
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.714
ELB improved by 0.0121705
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.703
ELB improved by 0.0106868
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-365.693
ELB improved by 0.00952414
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-835.842
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.732
ELB improved by 267.111
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.245
ELB improved by 59.487
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.693
ELB improved by 38.5512
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.184
ELB improved by 18.5094
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.874
ELB improved by 9.31044
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.003
ELB improved by 5.87067
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.388
ELB improved by 4.61512
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.255
ELB improved by 4.13283
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.388
ELB improved by 3.8669
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.779
ELB improved by 3.60963
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.489
ELB improved by 3.28973
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.588
ELB improved by 2.90035
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.119
ELB improved by 2.46991
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.081
ELB improved by 2.03739
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.446
ELB improved by 1.63555
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.155
ELB improved by 1.29082
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.142
ELB improved by 1.01249
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.352
ELB improved by 0.789954
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.742
ELB improved by 0.610282
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.273
ELB improved by 0.4691
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.908
ELB improved by 0.364466
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.618
ELB improved by 0.290098
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.381
ELB improved by 0.237249
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.183
ELB improved by 0.198505
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.014
ELB improved by 0.16894
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.868
ELB improved by 0.145584
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.741
ELB improved by 0.12665
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.63
ELB improved by 0.111013
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.533
ELB improved by 0.0979225
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.446
ELB improved by 0.0868468
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.368
ELB improved by 0.0773938
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.299
ELB improved by 0.0692656
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.237
ELB improved by 0.0622308
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.181
ELB improved by 0.0561069
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.13
ELB improved by 0.050748
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.084
ELB improved by 0.0460362
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.042
ELB improved by 0.0418752
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.004
ELB improved by 0.0381863
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.969
ELB improved by 0.0349038
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.937
ELB improved by 0.0319731
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.908
ELB improved by 0.0293485
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.881
ELB improved by 0.0269913
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.856
ELB improved by 0.0248685
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.833
ELB improved by 0.0229521
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.812
ELB improved by 0.0212181
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.792
ELB improved by 0.0196457
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.774
ELB improved by 0.018217
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.757
ELB improved by 0.0169164
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.741
ELB improved by 0.0157302
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.726
ELB improved by 0.0146467
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.713
ELB improved by 0.0136554
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.7
ELB improved by 0.012747
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.688
ELB improved by 0.0119134
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.677
ELB improved by 0.0111475
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.667
ELB improved by 0.0104428
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.657
ELB improved by 0.00979366
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.387 0.222 2.598
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.048 | 0.030 | 0.079 | |
| getPIPs | 0.075 | 0.032 | 0.105 | |
| graper | 0.079 | 0.022 | 0.101 | |
| makeExampleData | 0.01 | 0.00 | 0.01 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.303 | 0.024 | 0.328 | |
| plotGroupPenalties | 0.968 | 0.006 | 0.976 | |
| plotPosterior | 0.652 | 0.011 | 0.663 | |
| predict.graper | 2.093 | 0.077 | 2.170 | |
| print.graper | 0.049 | 0.015 | 0.065 | |