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This page was generated on 2025-04-04 12:34 -0400 (Fri, 04 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 129/217HostnameOS / ArchINSTALLBUILDCHECK
maftools 2.23.0  (landing page)
Anand Mayakonda
Snapshot Date: 2025-04-04 12:00 -0400 (Fri, 04 Apr 2025)
git_url: https://git.bioconductor.org/packages/maftools
git_branch: devel
git_last_commit: 689045c
git_last_commit_date: 2024-10-29 10:12:31 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for maftools on teran2

To the developers/maintainers of the maftools package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: maftools
Version: 2.23.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data maftools
StartedAt: 2025-04-04 12:26:05 -0400 (Fri, 04 Apr 2025)
EndedAt: 2025-04-04 12:26:05 -0400 (Fri, 04 Apr 2025)
EllapsedTime: 0.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data maftools
###
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* checking for file ‘maftools/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/ensGenes.txt.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/hg19_cytobands.tsv.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/hg19_smash_snps.tsv.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/hg38_cytobands.tsv.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/hg38_smash_snps.tsv.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/hugo_to_mutSigSymbol.txt.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/legacy_signatures.RDs': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/oncogenic_sig_patwhays.tsv': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/pancan.txt.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/prot_len.txt.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/protein_domains.RDs': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/scores.gistic': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/simple_somatic_mutation.open.ESCA-CN.sample.tsv.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/tcga_cohort.txt.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/tcga_laml.maf.gz': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/tcga_laml_annot.tsv': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/variants.hg19_multianno.txt': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/extdata/variants.tsv': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/CITATION': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/NEWS.md': No space left on device
cp: error writing '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/inst/old_news': No space left on device
cp: cannot create directory '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/man': No space left on device
cp: cannot create directory '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/scripts': No space left on device
cp: cannot create directory '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/src': No space left on device
cp: cannot create directory '/tmp/RtmpnyBlLQ/Rbuild2c71936ecd68ab/maftools/vignettes': No space left on device
 ERROR
copying to build directory failed