| Back to Rapid builds (Linux only) of a subset of BioC 3.23 Report updated every 6 hours |
This page was generated on 2026-03-10 16:08 -0400 (Tue, 10 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-06 r89561) -- "Unsuffered Consequences" | 903 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 11/230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| annotate 1.89.0 (landing page) Bioconductor Package Maintainer
| teran2 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||
|
To the developers/maintainers of the annotate package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: annotate |
| Version: 1.89.0 |
| Command: /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD check --install=check:annotate.install-out.txt --library=/home/rapidbuild/bbs-3.23-bioc-rapid/R/site-library --timings annotate_1.89.0.tar.gz |
| StartedAt: 2026-03-10 13:45:49 -0400 (Tue, 10 Mar 2026) |
| EndedAt: 2026-03-10 13:45:53 -0400 (Tue, 10 Mar 2026) |
| EllapsedTime: 4.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: annotate.Rcheck |
| Warnings: NA |
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### Running command:
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### /home/rapidbuild/bbs-3.23-bioc-rapid/R/bin/R CMD check --install=check:annotate.install-out.txt --library=/home/rapidbuild/bbs-3.23-bioc-rapid/R/site-library --timings annotate_1.89.0.tar.gz
###
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* using log directory ‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/annotate.Rcheck’
* using R Under development (unstable) (2026-03-06 r89561)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* current time: 2026-03-10 17:45:50 UTC
* checking for file ‘annotate/DESCRIPTION’ ... OK
* this is package ‘annotate’ version ‘1.89.0’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Bioconductor Package Maintainer <maintainer@bioconductor.org>’
Unknown, possibly misspelled, fields in DESCRIPTION:
‘git_url’ ‘git_branch’ ‘git_last_commit’ ‘git_last_commit_date’
The Title field should be in title case. Current version is:
‘Annotation for microarrays’
In title case that is:
‘Annotation for Microarrays’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘humanCHRLOC’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR, 1 NOTE
See
‘/media/volume/teran2_disk/rapidbuild/bbs-3.23-bioc-rapid/meat/annotate.Rcheck/00check.log’
for details.