Yongchao Ge
| Snapshot Date: 2026-03-08 13:40 -0400 (Sun, 08 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/flowPeaks |
| git_branch: devel |
| git_last_commit: 7ccd7be |
| git_last_commit_date: 2025-10-29 10:11:17 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-09 11:33 -0400 (Mon, 09 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4508 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-02-28 r89501) -- "Unsuffered Consequences" | 3381 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 767/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| flowPeaks 1.57.0 (landing page) Yongchao Ge
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for flowPeaks in R Universe. | ||||||||||||||
|
To the developers/maintainers of the flowPeaks package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/flowPeaks.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: flowPeaks |
| Version: 1.57.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data flowPeaks |
| StartedAt: 2026-03-08 17:42:26 -0400 (Sun, 08 Mar 2026) |
| EndedAt: 2026-03-08 17:42:47 -0400 (Sun, 08 Mar 2026) |
| EllapsedTime: 21.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data flowPeaks
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* checking for file ‘flowPeaks/DESCRIPTION’ ... OK
* preparing ‘flowPeaks’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘flowPeaks-guide.Rnw’ using Sweave
Starting the flow Peaks analysis...
Task A: compute kmeans...
...finished summarization at 0.604 sec
Task B: find peaks...
finished at 0.668 sec
Starting the flow Peaks analysis...
Task A: compute kmeans...
...finished summarization at 0.369 sec
Task B: find peaks...
finished at 0.425 sec
Loading required package: flowCore
Warning in library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘flowCore’
Error: processing vignette 'flowPeaks-guide.Rnw' failed with diagnostics:
chunk 17 (label = stage7)
Error in read.FCS(system.file("extdata", "0877408774.B08", package = "flowCore")) :
could not find function "read.FCS"
--- failed re-building ‘flowPeaks-guide.Rnw’
SUMMARY: processing the following file failed:
‘flowPeaks-guide.Rnw’
Error: Vignette re-building failed.
Execution halted