| Back to Build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-02-13 11:32 -0500 (Fri, 13 Feb 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-01-15 r89304) -- "Unsuffered Consequences" | 4863 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2024/2352 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SingleCellSignalR 2.1.1 (landing page) Jean-Philippe Villemin
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| See other builds for SingleCellSignalR in R Universe. | ||||||||||||||
|
To the developers/maintainers of the SingleCellSignalR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleCellSignalR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: SingleCellSignalR |
| Version: 2.1.1 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:SingleCellSignalR.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings SingleCellSignalR_2.1.1.tar.gz |
| StartedAt: 2026-02-13 04:25:44 -0500 (Fri, 13 Feb 2026) |
| EndedAt: 2026-02-13 04:28:14 -0500 (Fri, 13 Feb 2026) |
| EllapsedTime: 150.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: SingleCellSignalR.Rcheck |
| Warnings: NA |
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### Running command:
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### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:SingleCellSignalR.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings SingleCellSignalR_2.1.1.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/SingleCellSignalR.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.3 LTS
* using session charset: UTF-8
* checking for file ‘SingleCellSignalR/DESCRIPTION’ ... OK
* this is package ‘SingleCellSignalR’ version ‘2.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SingleCellSignalR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... WARNING
Invalid license file pointers: LICENSE
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... ERROR
Loading this package had a fatal error status code 1
Loading log:
✖ Remote server is down.
"https://partage-dev.montp.inserm.fr:9192/CBSB/"
Error: package or namespace load failed for ‘SingleCellSignalR’:
.onLoad failed in loadNamespace() for 'BulkSignalR', details:
call: .testRemoteServer()
error:
Execution halted
* DONE
Status: 1 ERROR, 1 WARNING
See
‘/home/biocbuild/bbs-3.23-bioc/meat/SingleCellSignalR.Rcheck/00check.log’
for details.
SingleCellSignalR.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL SingleCellSignalR ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘SingleCellSignalR’ ... ** this is package ‘SingleCellSignalR’ version ‘2.1.1’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SingleCellSignalR)