Back to Multiple platform build/check report for BioC 3.7 |
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This page was generated on 2018-10-17 08:35:41 -0400 (Wed, 17 Oct 2018).
Package 1052/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
PANR 1.26.0 Xin Wang
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | ![]() | ||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | ![]() |
Package: PANR |
Version: 1.26.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/PANR_1.26.0.tar.gz && rm -rf PANR.buildbin-libdir && mkdir PANR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PANR.buildbin-libdir PANR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL PANR_1.26.0.zip && rm PANR_1.26.0.tar.gz PANR_1.26.0.zip |
StartedAt: 2018-10-16 19:20:28 -0400 (Tue, 16 Oct 2018) |
EndedAt: 2018-10-16 19:21:29 -0400 (Tue, 16 Oct 2018) |
EllapsedTime: 61.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/PANR_1.26.0.tar.gz && rm -rf PANR.buildbin-libdir && mkdir PANR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PANR.buildbin-libdir PANR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL PANR_1.26.0.zip && rm PANR_1.26.0.tar.gz PANR_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 2027k 100 2027k 0 0 26.7M 0 --:--:-- --:--:-- --:--:-- 29.5M install for i386 * installing *source* package 'PANR' ... ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'PANR' finding HTML links ... done BetaMixture-class html PAN-class html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/PAN-class.Rd:21: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/PAN-class.Rd:85: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/PAN-class.Rd:85: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/PAN-class.Rd:89: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/PAN-class.Rd:89: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic SNR2p html assoScore html buildPAN html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/buildPAN.Rd:9: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/buildPAN.Rd:9: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/buildPAN.Rd:40: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/buildPAN.Rd:44: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic cosineSim html data-Bakal2007 html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/data-Bakal2007.Rd:29: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic edgeWeight html exportPAN html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/exportPAN.Rd:8: file link 'write.graph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/exportPAN.Rd:8: file link 'igraph' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/exportPAN.Rd:31: file link 'write.graph' in package 'igraph' does not exist and so has been treated as a topic fitBM html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/fitBM.Rd:40: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic fitNULL html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/fitNULL.Rd:25: file link 'dbeta' in package 'stats' does not exist and so has been treated as a topic infer html p2SNR html permNULL html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/permNULL.Rd:28: file link 'BetaMixture' in package 'PANR' does not exist and so has been treated as a topic pvclustModule html sigModules html summarize html view html viewLegend html viewNestedModules html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewNestedModules.Rd:9: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewNestedModules.Rd:38: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic viewPAN html Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewPAN.Rd:10: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewPAN.Rd:28: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewPAN.Rd:42: file link 'RedeR' in package 'RedeR' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp6D1iLI/R.INSTALL17a4401a2a6e/PANR/man/viewPAN.Rd:60: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic ** building package indices ** installing vignettes ** testing if installed package can be loaded In R CMD INSTALL install for x64 * installing *source* package 'PANR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'PANR' as PANR_1.26.0.zip * DONE (PANR) In R CMD INSTALL In R CMD INSTALL * installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library' package 'PANR' successfully unpacked and MD5 sums checked In R CMD INSTALL