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BioC 3.5: BUILD report for plateCore on oaxaca

This page was generated on 2017-03-04 16:38:16 -0500 (Sat, 04 Mar 2017).

Package 952/1339HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
plateCore 1.33.0
Errol Strain
Snapshot Date: 2017-03-03 17:15:47 -0500 (Fri, 03 Mar 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/plateCore
Last Changed Rev: 122712 / Revision: 127142
Last Changed Date: 2016-10-17 15:10:43 -0400 (Mon, 17 Oct 2016)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
toluca2 Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: plateCore
Version: 1.33.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data plateCore
StartedAt: 2017-03-03 16:23:55 -0800 (Fri, 03 Mar 2017)
EndedAt: 2017-03-03 16:24:38 -0800 (Fri, 03 Mar 2017)
EllapsedTime: 43.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data plateCore
###
##############################################################################
##############################################################################


* checking for file ‘plateCore/DESCRIPTION’ ... OK
* preparing ‘plateCore’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR

Attaching package: ‘gplots’

The following object is masked from ‘package:stats’:

    lowess

Loading required package: flowCore
Loading required package: flowViz
Loading required package: lattice
Loading required package: latticeExtra
Loading required package: RColorBrewer

Attaching package: ‘latticeExtra’

The following object is masked from ‘package:flowViz’:

    ecdfplot

Warning in rgl.init(initValue, onlyNULL) :
  RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
No methods found in "flowStats" for requests: %on%
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running 'texi2dvi' on 'plateCoreVig.tex' failed.
LaTeX errors:
! Package auto-pst-pdf Error: 
    "shell escape" (or "write18") is not enabled:
    auto-pst-pdf will not work!
.

! Emergency stop.
 ...                                              
                                                  
l.134         Or turn off auto-pst-pdf.}
                                        %
!  ==> Fatal error occurred, no output PDF file produced!
Calls: <Anonymous> -> texi2pdf -> texi2dvi
Execution halted