iClusterPlus 1.12.1
Qianxing Mo , Ronglai Shen
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/iClusterPlus | | Last Changed Rev: 129423 / Revision: 131943 | | Last Changed Date: 2017-05-05 15:32:27 -0400 (Fri, 05 May 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | OK | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD INSTALL iClusterPlus
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.5-bioc/R/library’
* installing *source* package ‘iClusterPlus’ ...
This package has only been tested with gfortran.
So some checks are needed.
R_HOME is /home/biocbuild/bbs-3.5-bioc/R
Attempting to determine R_ARCH...
R_ARCH is
Attempting to detect how R was configured for Fortran 90....
R configured for gfortran; Good!
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -I/home/biocbuild/bbs-3.5-bioc/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c iClusterPlus.c -o iClusterPlus.o
iClusterPlus.c: In function ‘iClusterCore’:
iClusterPlus.c:1098:60: warning: unused variable ‘tempm3’ [-Wunused-variable]
double *btp,*btpb, *EXZt,*tempX,*tempm0,*tempm1,*tempm2,*tempm3,*BOld,*PhivecOld, *XtXdiag;
^
iClusterPlus.c:1096:18: warning: variable ‘pp’ set but not used [-Wunused-but-set-variable]
int i, j,kk,pk,pp,s,t;
^
gfortran -fdefault-real-8 -ffixed-form -fpic -g -O2 -c newGLMnet.f90 -o newGLMnet.o
gfortran -shared -L/home/biocbuild/bbs-3.5-bioc/R/lib -L/usr/local/lib -o iClusterPlus.so iClusterPlus.o newGLMnet.o -L/home/biocbuild/bbs-3.5-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.5-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.5-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.5-bioc/R/library/iClusterPlus/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
‘iClusterPlus.Rnw’ using ‘UTF-8’
** testing if installed package can be loaded
* DONE (iClusterPlus)