betr 1.30.0
Martin Aryee
| Snapshot Date: 2016-10-15 17:10:04 -0400 (Sat, 15 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/betr | | Last Changed Rev: 121371 / Revision: 122465 | | Last Changed Date: 2016-09-26 08:08:03 -0400 (Mon, 26 Sep 2016) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | [ ERROR ] | skipped | | |
| tokay2 | Windows Server 2012 R2 Standard / x64 | NotNeeded | ERROR | skipped | skipped | |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data betr
###
##############################################################################
##############################################################################
* checking for file ‘betr/DESCRIPTION’ ... OK
* preparing ‘betr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall,
clusterEvalQ, clusterExport, clusterMap,
parApply, parCapply, parLapply, parLapplyLB,
parRapply, parSapply, parSapplyLB
The following objects are masked from ‘package:stats’:
IQR, mad, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce,
anyDuplicated, append, as.data.frame, cbind,
colnames, do.call, duplicated, eval, evalq, get,
grep, grepl, intersect, is.unsorted, lapply,
lengths, mapply, match, mget, order, paste, pmax,
pmax.int, pmin, pmin.int, rank, rbind, rownames,
sapply, setdiff, sort, table, tapply, union,
unique, unsplit, which, which.max, which.min
Welcome to Bioconductor
Vignettes contain introductory material; view
with 'browseVignettes()'. To cite Bioconductor,
see 'citation("Biobase")', and for packages
'citation("pkgname")'.
Error: processing vignette 'betr.Rnw' failed with diagnostics:
chunk 3 (label = runBETR)
Error in if (evar > 0) { : missing value where TRUE/FALSE needed
Execution halted