Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L [M] N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.5: BUILD report for MeSHSim on toluca2

This page was generated on 2017-04-23 14:39:32 -0400 (Sun, 23 Apr 2017).

Package 781/1377HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MeSHSim 1.7.1
Jing ZHou
Snapshot Date: 2017-04-22 17:18:01 -0400 (Sat, 22 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MeSHSim
Last Changed Rev: 125072 / Revision: 129046
Last Changed Date: 2016-12-13 09:45:00 -0500 (Tue, 13 Dec 2016)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
toluca2 Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: MeSHSim
Version: 1.7.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MeSHSim
StartedAt: 2017-04-22 21:42:46 -0400 (Sat, 22 Apr 2017)
EndedAt: 2017-04-22 21:42:54 -0400 (Sat, 22 Apr 2017)
EllapsedTime: 8.6 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MeSHSim
###
##############################################################################
##############################################################################


* checking for file ‘MeSHSim/DESCRIPTION’ ... OK
* preparing ‘MeSHSim’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: bitops
Warning: Package 'MeSHSim' is deprecated and will be removed from
  Bioconductor version 3.6

Error: processing vignette 'MeSHSim.Rnw' failed with diagnostics:
 chunk 15 (label = main14) 
Error : 1: Space required after the Public Identifier
2: SystemLiteral " or ' expected
3: SYSTEM or PUBLIC, the URI is missing

Execution halted