BioC 3.5: BUILD BIN report for AnnotationForge on tokay2

Package: AnnotationForge

Version: 1.18.1

Command: cd AnnotationForge.buildbin-libdir/AnnotationForge && zip -r ../../AnnotationForge_1.18.1.zip . & cd ../..

StartedAt: 2017-08-16 04:12:28 -0400 (Wed, 16 Aug 2017)

EndedAt: 2017-08-16 04:13:18 -0400 (Wed, 16 Aug 2017)

EllapsedTime: 49.8 seconds

RetCode: 0

Status:  OK

PackageFile: AnnotationForge_1.18.1.zip

PackageFileSize: 7.953 MiB

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###
### Running command:
###
###   cd AnnotationForge.buildbin-libdir/AnnotationForge && zip -r ../../AnnotationForge_1.18.1.zip . & cd ../..
###
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  adding: AnnDbPkg-templates/INPARANOID.DB/NAMESPACE (264 bytes security) (deflated 44%)
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  adding: AnnDbPkg-templates/MALARIA.DB/NAMESPACE (264 bytes security) (deflated 44%)
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  adding: AnnDbPkg-templates/NCBICHIP.DB/man/GO.Rd (264 bytes security) (deflated 63%)
  adding: AnnDbPkg-templates/NCBICHIP.DB/man/MAP.Rd (264 bytes security) (deflated 51%)
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  adding: doc/SQLForge.Rnw (264 bytes security) (deflated 61%)
  adding: extdata/ (304 bytes security) (stored 0%)
  adding: extdata/finch_info.txt (264 bytes security) (deflated 80%)
  adding: extdata/GentlemanLab/ (304 bytes security) (stored 0%)
  adding: extdata/GentlemanLab/ANNDBPKG-INDEX.TXT (264 bytes security) (deflated 90%)
  adding: extdata/GentlemanLab/chip-batch-script.R (264 bytes security) (deflated 60%)
  adding: extdata/GentlemanLab/generateSchemas.R (264 bytes security) (deflated 57%)
  adding: extdata/GentlemanLab/org-batch-script.R (264 bytes security) (deflated 61%)
  adding: extdata/GO_finch.txt (264 bytes security) (deflated 83%)
  adding: extdata/hcg110_ID (264 bytes security) (deflated 62%)
  adding: extdata/HG-U95Av2_probe_tab.gz (264 bytes security) (deflated 0%)
  adding: extdata/hgu95av2_ID (264 bytes security) (deflated 65%)
  adding: extdata/inp8_Full_species_mapping (264 bytes security) (deflated 64%)
  adding: extdata/inp8_metadata (264 bytes security) (deflated 27%)
  adding: extdata/unigene.txt (264 bytes security) (deflated 37%)
  adding: extdata/viableIDs.rda (264 bytes security) (stored 0%)
  adding: help/ (304 bytes security) (stored 0%)
  adding: help/aliases.rds (264 bytes security) (stored 0%)
  adding: help/AnIndex (264 bytes security) (deflated 74%)
  adding: help/AnnotationForge.rdb (264 bytes security) (deflated 0%)
  adding: help/AnnotationForge.rdx (264 bytes security) (stored 0%)
  adding: help/paths.rds (264 bytes security) (stored 0%)
  adding: html/ (304 bytes security) (stored 0%)
  adding: html/00Index.html (264 bytes security) (deflated 83%)
  adding: html/R.css (264 bytes security) (deflated 75%)
  adding: INDEX (264 bytes security) (deflated 64%)
  adding: MD5 (264 bytes security) (deflated 69%)
  adding: Meta/ (304 bytes security) (stored 0%)
  adding: Meta/features.rds (264 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
  adding: Meta/links.rds (264 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
  adding: Meta/package.rds (264 bytes security) (stored 0%)
  adding: Meta/Rd.rds (264 bytes security) (stored 0%)
  adding: Meta/vignette.rds (264 bytes security) (stored 0%)
  adding: NAMESPACE (264 bytes security) (deflated 56%)
  adding: NEWS (264 bytes security) (deflated 57%)
  adding: NOTES-Herve (264 bytes security) (deflated 50%)
  adding: ProbePkg-template/ (304 bytes security) (stored 0%)
  adding: ProbePkg-template/data/ (304 bytes security) (stored 0%)
  adding: ProbePkg-template/DESCRIPTION (264 bytes security) (deflated 29%)
  adding: ProbePkg-template/man/ (304 bytes security) (stored 0%)
  adding: ProbePkg-template/man/@PKGNAME@.Rd (264 bytes security) (deflated 47%)
  adding: ProbePkg-template/NAMESPACE (264 bytes security) (deflated 8%)
  adding: ProbePkg-template/R/ (304 bytes security) (stored 0%)
  adding: ProbePkg-template/R/zzz.R (264 bytes security) (deflated 26%)
  adding: R/ (304 bytes security) (stored 0%)
  adding: R/AnnotationForge (264 bytes security) (deflated 41%)
  adding: R/AnnotationForge.rdb (264 bytes security) (deflated 3%)
  adding: R/AnnotationForge.rdx (264 bytes security) (stored 0%)
  adding: script/ (304 bytes security) (stored 0%)
  adding: script/fasterOrgRecipe.R (264 bytes security) (deflated 68%)
  adding: script/makeNoSchemaChipDb.R (264 bytes security) (deflated 67%)
  adding: script/makeNoSchemaDb.R (264 bytes security) (deflated 64%)
  adding: script/viableIDs.R (264 bytes security) (deflated 62%)
  adding: seqnames-template/ (304 bytes security) (stored 0%)
  adding: seqnames-template/DESCRIPTION (264 bytes security) (deflated 37%)
  adding: seqnames-template/inst/ (304 bytes security) (stored 0%)
  adding: seqnames-template/inst/extdata/ (304 bytes security) (stored 0%)
  adding: seqnames-template/inst/extdata/dataFiles/ (304 bytes security) (stored 0%)
  adding: seqnames-template/inst/extdata/dataFiles/Arabidopsis_thaliana.csv (264 bytes security) (stored 0%)
  adding: seqnames-template/inst/extdata/dataFiles/Caenorhabditis_elegans.csv (264 bytes security) (deflated 29%)
  adding: seqnames-template/inst/extdata/dataFiles/Cyanidioschyzon_merolae.csv (264 bytes security) (deflated 41%)
  adding: seqnames-template/inst/extdata/dataFiles/Drosophila_melanogaster.csv (264 bytes security) (deflated 43%)
  adding: seqnames-template/inst/extdata/dataFiles/Homo_sapiens.csv (264 bytes security) (deflated 48%)
  adding: seqnames-template/inst/extdata/dataFiles/Oryza_sativa.csv (264 bytes security) (deflated 13%)
  adding: seqnames-template/inst/extdata/dataFiles/Populus_trichocarpa.csv (264 bytes security) (deflated 42%)
  adding: seqnames-template/inst/extdata/dataFiles/Saccharomyces_cerevisiae.csv (264 bytes security) (deflated 50%)
  adding: seqnames-template/inst/extdata/dataFiles/Zea_mays.csv (264 bytes security) (deflated 6%)
  adding: seqnames-template/NAMESPACE (264 bytes security) (deflated 1%)
  adding: TODO (264 bytes security) (deflated 41%)
  adding: unitTests/ (304 bytes security) (stored 0%)
  adding: unitTests/test_makeOrgPackage.R (264 bytes security) (deflated 64%)