AnnotationDbi 1.38.2
Bioconductor Package Maintainer
| Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/AnnotationDbi | | Last Changed Rev: 131573 / Revision: 131943 | | Last Changed Date: 2017-07-25 17:39:19 -0400 (Tue, 25 Jul 2017) |
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |
| veracruz2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### cd AnnotationDbi.buildbin-libdir/AnnotationDbi && zip -r ../../AnnotationDbi_1.38.2.zip . & cd ../..
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adding: DBschemas/ (304 bytes security) (stored 0%)
adding: DBschemas/SchemaGuidelines.txt (264 bytes security) (deflated 53%)
adding: DBschemas/schemas_0.9/ (304 bytes security) (stored 0%)
adding: DBschemas/schemas_0.9/00README.TXT (264 bytes security) (deflated 41%)
adding: DBschemas/schemas_0.9/ARABIDOPSISCHIP_DB.sql (264 bytes security) (deflated 80%)
adding: DBschemas/schemas_0.9/DataTypes.txt (264 bytes security) (deflated 71%)
adding: DBschemas/schemas_0.9/FLYCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_0.9/FLY_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_0.9/GO_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_0.9/HUMANCHIP_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_0.9/HUMAN_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_0.9/KEGG_DB.sql (264 bytes security) (deflated 63%)
adding: DBschemas/schemas_0.9/RODENTCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_0.9/RODENT_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_0.9/YEASTCHIP_DB.sql (264 bytes security) (deflated 80%)
adding: DBschemas/schemas_0.9/YEAST_DB.sql (264 bytes security) (deflated 81%)
adding: DBschemas/schemas_1.0/ (304 bytes security) (stored 0%)
adding: DBschemas/schemas_1.0/00README.TXT (264 bytes security) (deflated 56%)
adding: DBschemas/schemas_1.0/ARABIDOPSISCHIP_DB.sql (264 bytes security) (deflated 80%)
adding: DBschemas/schemas_1.0/BOVINECHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/BOVINE_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/CANINECHIP_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_1.0/CANINE_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_1.0/CHICKENCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/CHICKEN_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/DataTypes.txt (264 bytes security) (deflated 71%)
adding: DBschemas/schemas_1.0/ECOLICHIP_DB.sql (264 bytes security) (deflated 81%)
adding: DBschemas/schemas_1.0/ECOLI_DB.sql (264 bytes security) (deflated 81%)
adding: DBschemas/schemas_1.0/FLYCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/FLY_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/GO_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/HUMANCHIP_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/HUMANCROSSCHIP_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/HUMAN_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_1.0/INPARANOIDDROME_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_1.0/INPARANOIDHOMSA_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_1.0/INPARANOIDMUSMU_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_1.0/INPARANOIDRATNO_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_1.0/INPARANOIDSACCE_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_1.0/KEGG_DB.sql (264 bytes security) (deflated 63%)
adding: DBschemas/schemas_1.0/MALARIA_DB.sql (264 bytes security) (deflated 80%)
adding: DBschemas/schemas_1.0/MOUSECHIP_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/MOUSE_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/PFAM_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_1.0/PIGCHIP_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_1.0/PIG_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_1.0/RATCHIP_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/RAT_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_1.0/WORMCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/WORM_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/YEASTCHIP_DB.sql (264 bytes security) (deflated 80%)
adding: DBschemas/schemas_1.0/YEAST_DB.sql (264 bytes security) (deflated 81%)
adding: DBschemas/schemas_1.0/ZEBRAFISHCHIP_DB.sql (264 bytes security) (deflated 82%)
adding: DBschemas/schemas_1.0/ZEBRAFISH_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_2.0/ (304 bytes security) (stored 0%)
adding: DBschemas/schemas_2.0/00README.TXT (264 bytes security) (deflated 45%)
adding: DBschemas/schemas_2.0/ANOPHELES_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/ARABIDOPSISCHIP_DB.sql (264 bytes security) (deflated 55%)
adding: DBschemas/schemas_2.0/ARABIDOPSIS_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.0/BOVINECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/BOVINE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/CANINECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/CANINE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/CHICKENCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/CHICKEN_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/CHIMP_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/DataTypes.txt (264 bytes security) (deflated 71%)
adding: DBschemas/schemas_2.0/ECOLI_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.0/FLYCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/FLY_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.0/GO_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_2.0/HUMANCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/HUMAN_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/INPARANOID_DB.sql (264 bytes security) (deflated 88%)
adding: DBschemas/schemas_2.0/KEGG_DB.sql (264 bytes security) (deflated 65%)
adding: DBschemas/schemas_2.0/MALARIA_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_2.0/MOUSECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/MOUSE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/PFAM_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_2.0/PIG_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.0/RATCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/RAT_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/RHESUS_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.0/WORMCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/WORM_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.0/XENOPUSCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/XENOPUS_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.0/YEASTCHIP_DB.sql (264 bytes security) (deflated 55%)
adding: DBschemas/schemas_2.0/YEAST_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.0/ZEBRAFISHCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.0/ZEBRAFISH_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/ (304 bytes security) (stored 0%)
adding: DBschemas/schemas_2.1/00README.TXT (264 bytes security) (deflated 45%)
adding: DBschemas/schemas_2.1/ANOPHELES_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/ARABIDOPSISCHIP_DB.sql (264 bytes security) (deflated 55%)
adding: DBschemas/schemas_2.1/ARABIDOPSIS_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.1/BOVINECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/BOVINE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/CANINECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/CANINE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/CHICKENCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/CHICKEN_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/CHIMP_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/COELICOLOR_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_2.1/DataTypes.txt (264 bytes security) (deflated 71%)
adding: DBschemas/schemas_2.1/ECOLI_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.1/FLYCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/FLY_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/GO_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_2.1/HUMANCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/HUMAN_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/INPARANOID_DB.sql (264 bytes security) (deflated 90%)
adding: DBschemas/schemas_2.1/KEGG_DB.sql (264 bytes security) (deflated 65%)
adding: DBschemas/schemas_2.1/MALARIA_DB.sql (264 bytes security) (deflated 83%)
adding: DBschemas/schemas_2.1/MOUSECHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/MOUSE_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/PFAM_DB.sql (264 bytes security) (deflated 76%)
adding: DBschemas/schemas_2.1/PIG_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.1/RATCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/RAT_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/RHESUS_DB.sql (264 bytes security) (deflated 86%)
adding: DBschemas/schemas_2.1/WORMCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/WORM_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.1/XENOPUSCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/XENOPUS_DB.sql (264 bytes security) (deflated 84%)
adding: DBschemas/schemas_2.1/YEASTCHIP_DB.sql (264 bytes security) (deflated 55%)
adding: DBschemas/schemas_2.1/YEAST_DB.sql (264 bytes security) (deflated 85%)
adding: DBschemas/schemas_2.1/ZEBRAFISHCHIP_DB.sql (264 bytes security) (deflated 58%)
adding: DBschemas/schemas_2.1/ZEBRAFISH_DB.sql (264 bytes security) (deflated 86%)
adding: DESCRIPTION (264 bytes security) (deflated 53%)
adding: doc/ (304 bytes security) (stored 0%)
adding: doc/AnnotationDbi.pdf (264 bytes security) (deflated 13%)
adding: doc/AnnotationDbi.R (264 bytes security) (deflated 74%)
adding: doc/AnnotationDbi.Rnw (264 bytes security) (deflated 65%)
adding: doc/index.html (264 bytes security) (deflated 68%)
adding: doc/IntroToAnnotationPackages.pdf (264 bytes security) (deflated 10%)
adding: doc/IntroToAnnotationPackages.R (264 bytes security) (deflated 75%)
adding: doc/IntroToAnnotationPackages.Rnw (264 bytes security) (deflated 64%)
adding: extdata/ (304 bytes security) (stored 0%)
adding: extdata/hcg110_ID (264 bytes security) (deflated 62%)
adding: extdata/HG-U95Av2_probe_tab.gz (264 bytes security) (deflated 0%)
adding: extdata/hgu95av2_ID (264 bytes security) (deflated 65%)
adding: extdata/Inp_species_mapping (264 bytes security) (deflated 64%)
adding: extdata/manyToOneBlackList.Rda (264 bytes security) (stored 0%)
adding: extdata/org.testing.db/ (304 bytes security) (stored 0%)
adding: extdata/org.testing.db/DESCRIPTION (264 bytes security) (deflated 49%)
adding: extdata/org.testing.db/inst/ (304 bytes security) (stored 0%)
adding: extdata/org.testing.db/inst/extdata/ (304 bytes security) (stored 0%)
adding: extdata/org.testing.db/inst/extdata/org.testing.sqlite (264 bytes security) (deflated 78%)
adding: extdata/org.testing.db/man/ (304 bytes security) (stored 0%)
adding: extdata/org.testing.db/man/org.TguttataTestingSubset.egBASE.Rd (264 bytes security) (deflated 54%)
adding: extdata/org.testing.db/man/org.TguttataTestingSubset.egORGANISM.Rd (264 bytes security) (deflated 57%)
adding: extdata/org.testing.db/man/org.TguttataTestingSubset.eg_dbconn.Rd (264 bytes security) (deflated 69%)
adding: extdata/org.testing.db/NAMESPACE (264 bytes security) (deflated 44%)
adding: extdata/org.testing.db/R/ (304 bytes security) (stored 0%)
adding: extdata/org.testing.db/R/zzz.R (264 bytes security) (deflated 58%)
adding: extdata/resultTable.Rda (264 bytes security) (stored 0%)
adding: help/ (304 bytes security) (stored 0%)
adding: help/aliases.rds (264 bytes security) (stored 0%)
adding: help/AnIndex (264 bytes security) (deflated 82%)
adding: help/AnnotationDbi.rdb (264 bytes security) (deflated 0%)
adding: help/AnnotationDbi.rdx (264 bytes security) (stored 0%)
adding: help/paths.rds (264 bytes security) (stored 0%)
adding: html/ (304 bytes security) (stored 0%)
adding: html/00Index.html (264 bytes security) (deflated 92%)
adding: html/R.css (264 bytes security) (deflated 75%)
adding: INDEX (264 bytes security) (deflated 66%)
adding: MD5 (264 bytes security) (deflated 67%)
adding: Meta/ (304 bytes security) (stored 0%)
adding: Meta/features.rds (264 bytes security) (stored 0%)
adding: Meta/hsearch.rds (264 bytes security) (deflated 0%)
adding: Meta/links.rds (264 bytes security) (deflated 1%)
adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
adding: Meta/package.rds (264 bytes security) (stored 0%)
adding: Meta/Rd.rds (264 bytes security) (stored 0%)
adding: Meta/vignette.rds (264 bytes security) (stored 0%)
adding: NAMESPACE (264 bytes security) (deflated 63%)
adding: NEWS (264 bytes security) (deflated 65%)
adding: NOTES-Herve (264 bytes security) (deflated 50%)
adding: R/ (304 bytes security) (stored 0%)
adding: R/AnnotationDbi (264 bytes security) (deflated 41%)
adding: R/AnnotationDbi.rdb (264 bytes security) (deflated 29%)
adding: R/AnnotationDbi.rdx (264 bytes security) (deflated 3%)
adding: script/ (304 bytes security) (stored 0%)
adding: script/generateMultiCols.R (264 bytes security) (deflated 60%)
adding: TODO (264 bytes security) (deflated 29%)
adding: unitTests/ (304 bytes security) (stored 0%)
adding: unitTests/test_bimap.R (264 bytes security) (deflated 75%)
adding: unitTests/test_geneCentricDbs.R (264 bytes security) (deflated 41%)
adding: unitTests/test_mapIds.R (264 bytes security) (deflated 74%)
adding: unitTests/test_select.R (264 bytes security) (deflated 74%)
adding: unitTests/test_select_inparanoid.R (264 bytes security) (deflated 79%)
adding: unitTests/test_select_NOSCHEMA.R (264 bytes security) (deflated 72%)
adding: unitTests/test_select_reactome.R (264 bytes security) (deflated 75%)