charmData 1.8.0
Martin Aryee
| Snapshot Date: 2016-10-08 07:15:25 -0700 (Sat, 08 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_3/experiment/pkgs/charmData | | Last Changed Rev: 3760 / Revision: 3935 | | Last Changed Date: 2016-05-03 14:35:06 -0700 (Tue, 03 May 2016) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK | |
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### Running command:
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### rm -rf charmData.buildbin-libdir charmData.Rcheck && mkdir charmData.buildbin-libdir charmData.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=charmData.buildbin-libdir charmData_1.8.0.tar.gz >charmData.Rcheck\00install.out 2>&1 && cp charmData.Rcheck\00install.out charmData-install.out && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=charmData.buildbin-libdir --install="check:charmData-install.out" --force-multiarch --no-vignettes --timings charmData_1.8.0.tar.gz
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* using log directory 'E:/biocbld/bbs-3.3-data-experiment/meat/charmData.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'charmData/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'charmData' version '1.8.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'charmData' can be installed ... OK
* checking installed package size ... NOTE
installed size is 48.6Mb
sub-directories of 1Mb or more:
data 48.6Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... WARNING
Subdirectory 'data' contains no data sets.
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... WARNING
Files not of a type allowed in a 'data' directory:
'136421_532.xys' '136421_635.xys' '136600_532.xys' '136600_635.xys'
'3788602_532.xys' '3788602_635.xys' '3822402_532.xys'
'3822402_635.xys' '5739902_532.xys' '5739902_635.xys'
'5875602_532.xys' '5875602_635.xys'
Please use e.g. 'inst/extdata' for non-R data files
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 WARNINGs, 2 NOTEs
See
'E:/biocbld/bbs-3.3-data-experiment/meat/charmData.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'charmData' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'charmData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'charmData' as charmData_1.8.0.zip
* DONE (charmData)