BioC experimental data: CHECK report for RNAseqData.HNRNPC.bam.chr14 on zin2

Package: RNAseqData.HNRNPC.bam.chr14

Version: 0.10.0

Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings RNAseqData.HNRNPC.bam.chr14_0.10.0.tar.gz

StartedAt: 2016-10-08 10:04:40 -0700 (Sat, 08 Oct 2016)

EndedAt: 2016-10-08 10:05:29 -0700 (Sat, 08 Oct 2016)

EllapsedTime: 49.6 seconds

RetCode: 0

Status:  OK

CheckDir: RNAseqData.HNRNPC.bam.chr14.Rcheck

Warnings: 0

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### Running command:
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###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings RNAseqData.HNRNPC.bam.chr14_0.10.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.3-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck’
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘RNAseqData.HNRNPC.bam.chr14/DESCRIPTION’ ... OK
* this is package ‘RNAseqData.HNRNPC.bam.chr14’ version ‘0.10.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RNAseqData.HNRNPC.bam.chr14’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 420.3Mb
  sub-directories of 1Mb or more:
    extdata  420.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
                                      user system elapsed
RNAseqData.HNRNPC.bam.chr14-package 13.824  0.201  14.038
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.3-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck/00check.log’
for details.

* installing *source* package ‘RNAseqData.HNRNPC.bam.chr14’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (RNAseqData.HNRNPC.bam.chr14)

name	user	system	elapsed
RNAseqData.HNRNPC.bam.chr14-package	13.824	0.201	14.038