BioC experimental data: CHECK report for NGScopyData on linux2.bioconductor.org
This page was generated on 2015-10-24 19:25:37 -0400 (Sat, 24 Oct 2015).
NGScopyData 0.105.0 Xiaobei Zhao
Snapshot Date: 2015-10-24 10:15:05 -0400 (Sat, 24 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/NGScopyData | Last Changed Rev: 3462 / Revision: 3473 | Last Changed Date: 2015-10-13 16:20:35 -0400 (Tue, 13 Oct 2015) |
| linux2.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | [ OK ] | | |
windows2.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
Summary
Package: NGScopyData |
Version: 0.105.0 |
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings NGScopyData_0.105.0.tar.gz |
StartedAt: 2015-10-24 12:32:41 -0400 (Sat, 24 Oct 2015) |
EndedAt: 2015-10-24 12:32:51 -0400 (Sat, 24 Oct 2015) |
EllapsedTime: 10.2 seconds |
RetCode: 0 |
Status: OK |
CheckDir: NGScopyData.Rcheck |
Warnings: 0 |
Command output
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### Running command:
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### /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings NGScopyData_0.105.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.3-data-experiment/meat/NGScopyData.Rcheck’
* using R Under development (unstable) (2015-09-09 r69333)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘NGScopyData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘NGScopyData’ version ‘0.105.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘NGScopyData’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
installed size is 37.8Mb
sub-directories of 1Mb or more:
extdata 37.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [0s/0s] OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.3-data-experiment/meat/NGScopyData.Rcheck/00check.log’
for details.
NGScopyData.Rcheck/00install.out:
* installing *source* package ‘NGScopyData’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (NGScopyData)
NGScopyData.Rcheck/NGScopyData-Ex.timings:
name | user | system | elapsed
|
tps_27.chr6 | 0.001 | 0.000 | 0.001 |
|
tps_90.chr6 | 0.000 | 0.003 | 0.002 |
|
tps_N8.chr6 | 0.000 | 0.000 | 0.001 |
|