BioC experimental data: CHECK report for BeadArrayUseCases on zin2

Package: BeadArrayUseCases

Version: 1.10.0

Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings BeadArrayUseCases_1.10.0.tar.gz

StartedAt: 2016-10-08 09:08:01 -0700 (Sat, 08 Oct 2016)

EndedAt: 2016-10-08 09:08:53 -0700 (Sat, 08 Oct 2016)

EllapsedTime: 51.6 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: BeadArrayUseCases.Rcheck

Warnings: 1

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### Running command:
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###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings BeadArrayUseCases_1.10.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.3-data-experiment/meat/BeadArrayUseCases.Rcheck’
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘BeadArrayUseCases/DESCRIPTION’ ... OK
* this is package ‘BeadArrayUseCases’ version ‘1.10.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BeadArrayUseCases’ can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import ‘beadarray::imageplot’ by ‘limma::imageplot’ when loading ‘BeadArrayUseCases’
See ‘/home/biocbuild/bbs-3.3-data-experiment/meat/BeadArrayUseCases.Rcheck/00install.out’ for details.
* checking installed package size ... NOTE
  installed size is 277.4Mb
  sub-directories of 1Mb or more:
    extdata  276.7Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.3-data-experiment/meat/BeadArrayUseCases.Rcheck/00check.log’
for details.

* installing *source* package ‘BeadArrayUseCases’ ...
** inst
** help
No man pages found in package  ‘BeadArrayUseCases’ 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import ‘beadarray::imageplot’ by ‘limma::imageplot’ when loading ‘BeadArrayUseCases’
* DONE (BeadArrayUseCases)