Britta Velten
| Snapshot Date: 2026-05-22 13:45 -0400 (Fri, 22 May 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: ba611e2 |
| git_last_commit_date: 2026-04-28 08:49:19 -0400 (Tue, 28 Apr 2026) |
| Back to Multiple platform build/check report for BioC 3.24: simplified long |
|
This page was generated on 2026-05-23 11:35 -0400 (Sat, 23 May 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 RC (2026-04-17 r89917) -- "Because it was There" | 4937 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 Patched (2026-05-01 r89994) -- "Because it was There" | 4639 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 933/2379 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.29.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.29.0 |
| Command: /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz |
| StartedAt: 2026-05-23 00:31:15 -0400 (Sat, 23 May 2026) |
| EndedAt: 2026-05-23 00:32:47 -0400 (Sat, 23 May 2026) |
| EllapsedTime: 92.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.24-bioc/R/site-library --timings graper_1.29.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-05-23 04:31:15 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.29.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... INFO
installed size is 6.2Mb
sub-directories of 1Mb or more:
libs 6.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.24-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.24-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.24-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.29.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.24-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.24-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.24-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.24-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.24-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.24-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-892.682
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.919
ELB improved by 319.762
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.255
ELB improved by 58.664
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.278
ELB improved by 33.9773
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.717
ELB improved by 15.5612
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.418
ELB improved by 7.29854
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.473
ELB improved by 4.9455
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.974
ELB improved by 4.4992
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.369
ELB improved by 4.60428
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.573
ELB improved by 4.79611
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.834
ELB improved by 4.73886
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.581
ELB improved by 4.25304
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.124
ELB improved by 3.45738
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.583
ELB improved by 2.54059
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.956
ELB improved by 1.62696
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.958
ELB improved by 0.998248
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.277
ELB improved by 0.681403
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.77
ELB improved by 0.506555
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.406
ELB improved by 0.364001
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.151
ELB improved by 0.255296
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.964
ELB improved by 0.18735
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.821
ELB improved by 0.142632
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.71
ELB improved by 0.111231
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.62
ELB improved by 0.0895749
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.545
ELB improved by 0.0749191
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.48
ELB improved by 0.0648594
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.423
ELB improved by 0.0576934
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.37
ELB improved by 0.0523654
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.322
ELB improved by 0.0482481
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.277
ELB improved by 0.0449642
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.235
ELB improved by 0.0422792
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.195
ELB improved by 0.0400419
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.157
ELB improved by 0.0381516
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.12
ELB improved by 0.0365389
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.085
ELB improved by 0.0351552
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.051
ELB improved by 0.0339651
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.018
ELB improved by 0.0329426
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.986
ELB improved by 0.0320682
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.955
ELB improved by 0.0313267
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.924
ELB improved by 0.0307063
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.894
ELB improved by 0.0301978
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.864
ELB improved by 0.0297937
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.834
ELB improved by 0.029488
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.805
ELB improved by 0.0292758
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.776
ELB improved by 0.0291533
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.747
ELB improved by 0.0291173
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.718
ELB improved by 0.0291652
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.688
ELB improved by 0.029295
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.659
ELB improved by 0.0295048
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.629
ELB improved by 0.0297933
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.599
ELB improved by 0.0301589
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.568
ELB improved by 0.0306004
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.537
ELB improved by 0.0311163
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.506
ELB improved by 0.0317052
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.473
ELB improved by 0.0323651
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.44
ELB improved by 0.0330937
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.406
ELB improved by 0.0338885
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.371
ELB improved by 0.0347461
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.336
ELB improved by 0.0356627
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.299
ELB improved by 0.0366339
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.262
ELB improved by 0.0376546
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.223
ELB improved by 0.0387192
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.183
ELB improved by 0.0398213
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.142
ELB improved by 0.0409544
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.1
ELB improved by 0.0421112
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.057
ELB improved by 0.0432847
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.012
ELB improved by 0.0444672
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.967
ELB improved by 0.0456515
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.92
ELB improved by 0.0468303
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.872
ELB improved by 0.0479964
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.823
ELB improved by 0.0491431
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.772
ELB improved by 0.0502636
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.721
ELB improved by 0.0513515
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.669
ELB improved by 0.0524004
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.615
ELB improved by 0.0534041
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.561
ELB improved by 0.0543563
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.506
ELB improved by 0.0552505
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.449
ELB improved by 0.0560805
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.393
ELB improved by 0.0568399
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.335
ELB improved by 0.0575226
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.277
ELB improved by 0.0581233
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.218
ELB improved by 0.0586373
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.159
ELB improved by 0.059062
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.1
ELB improved by 0.0593967
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.04
ELB improved by 0.0596444
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.98
ELB improved by 0.0598128
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.92
ELB improved by 0.0599161
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.861
ELB improved by 0.0599778
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.8
ELB improved by 0.0600347
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.74
ELB improved by 0.0601438
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.68
ELB improved by 0.0603925
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.619
ELB improved by 0.0609181
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.557
ELB improved by 0.0619406
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.493
ELB improved by 0.0638203
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.426
ELB improved by 0.0671577
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.353
ELB improved by 0.0729511
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.27
ELB improved by 0.0827906
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.171
ELB improved by 0.0988861
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.048
ELB improved by 0.123253
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.893
ELB improved by 0.155057
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.705
ELB improved by 0.18782
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.492
ELB improved by 0.213624
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.262
ELB improved by 0.229242
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.037
ELB improved by 0.225268
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.847
ELB improved by 0.19037
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.705
ELB improved by 0.142203
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.598
ELB improved by 0.106154
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.514
ELB improved by 0.0846263
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.444
ELB improved by 0.0695267
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.388
ELB improved by 0.0559352
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.345
ELB improved by 0.0434604
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.312
ELB improved by 0.03314
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.286
ELB improved by 0.0253368
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.267
ELB improved by 0.0196718
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.251
ELB improved by 0.0155774
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.239
ELB improved by 0.0125923
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.228
ELB improved by 0.0103988
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.219
ELB improved by 0.00877986
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.924
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-590.125
ELB improved by 274.799
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-530.84
ELB improved by 59.2844
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.973
ELB improved by 42.8669
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.773
ELB improved by 19.2004
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.825
ELB improved by 6.94824
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.106
ELB improved by 3.71889
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.071
ELB improved by 3.03515
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.085
ELB improved by 2.98611
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.953
ELB improved by 3.1311
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.693
ELB improved by 3.26056
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.488
ELB improved by 3.20531
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.622
ELB improved by 2.86524
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.339
ELB improved by 2.28329
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.705
ELB improved by 1.63407
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.609
ELB improved by 1.09627
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.873
ELB improved by 0.735432
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.354
ELB improved by 0.519591
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.96
ELB improved by 0.394055
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.641
ELB improved by 0.318905
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.369
ELB improved by 0.27147
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.129
ELB improved by 0.239886
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.911
ELB improved by 0.218005
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.709
ELB improved by 0.202616
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.517
ELB improved by 0.192095
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.331
ELB improved by 0.185779
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.147
ELB improved by 0.183721
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.961
ELB improved by 0.186617
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.765
ELB improved by 0.195785
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.552
ELB improved by 0.213053
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.311
ELB improved by 0.240446
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.032
ELB improved by 0.279488
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.704
ELB improved by 0.327828
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.335
ELB improved by 0.368909
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.962
ELB improved by 0.373298
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.621
ELB improved by 0.34071
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.319
ELB improved by 0.301627
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.05
ELB improved by 0.269042
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.809
ELB improved by 0.241125
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.593
ELB improved by 0.216093
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.4
ELB improved by 0.1936
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.226
ELB improved by 0.17362
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.07
ELB improved by 0.156053
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.929
ELB improved by 0.140692
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.802
ELB improved by 0.127275
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.686
ELB improved by 0.115536
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.581
ELB improved by 0.105225
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.485
ELB improved by 0.096124
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.397
ELB improved by 0.0880483
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.316
ELB improved by 0.0808438
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.242
ELB improved by 0.0743837
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.173
ELB improved by 0.0685639
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.11
ELB improved by 0.063299
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.051
ELB improved by 0.0585186
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.997
ELB improved by 0.0541641
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.947
ELB improved by 0.0501868
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.9
ELB improved by 0.0465452
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.857
ELB improved by 0.0432045
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.817
ELB improved by 0.0401347
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.78
ELB improved by 0.0373097
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.745
ELB improved by 0.0347069
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.713
ELB improved by 0.0323066
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.683
ELB improved by 0.030091
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.655
ELB improved by 0.0280447
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.629
ELB improved by 0.0261537
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.604
ELB improved by 0.0244053
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.581
ELB improved by 0.0227883
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.56
ELB improved by 0.0212923
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.54
ELB improved by 0.019908
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.522
ELB improved by 0.0186268
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.504
ELB improved by 0.0174407
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.488
ELB improved by 0.0163426
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.472
ELB improved by 0.0153258
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.458
ELB improved by 0.0143842
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.445
ELB improved by 0.0135122
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.432
ELB improved by 0.0127044
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.42
ELB improved by 0.011956
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.409
ELB improved by 0.0112626
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.398
ELB improved by 0.01062
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.388
ELB improved by 0.0100243
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.378
ELB improved by 0.00947202
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-812.625
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.054
ELB improved by 245.571
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-507.881
ELB improved by 59.1732
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.632
ELB improved by 41.2488
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.017
ELB improved by 21.6147
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.231
ELB improved by 8.78679
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.652
ELB improved by 4.57859
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.121
ELB improved by 3.53062
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.882
ELB improved by 3.2396
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.778
ELB improved by 3.10421
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.822
ELB improved by 2.95579
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.115
ELB improved by 2.70696
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.799
ELB improved by 2.31613
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.974
ELB improved by 1.82505
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.63
ELB improved by 1.34336
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.667
ELB improved by 0.963505
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.959
ELB improved by 0.707935
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.408
ELB improved by 0.551196
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.949
ELB improved by 0.459
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.544
ELB improved by 0.405002
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.172
ELB improved by 0.371365
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.826
ELB improved by 0.346739
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.5
ELB improved by 0.325891
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.191
ELB improved by 0.308374
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.896
ELB improved by 0.295336
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.609
ELB improved by 0.28737
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.324
ELB improved by 0.284406
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.038
ELB improved by 0.286274
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.745
ELB improved by 0.293103
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.439
ELB improved by 0.30552
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.115
ELB improved by 0.324816
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.761
ELB improved by 0.35319
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.367
ELB improved by 0.394083
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.915
ELB improved by 0.452475
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.38
ELB improved by 0.534557
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.735
ELB improved by 0.645017
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.956
ELB improved by 0.778832
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.048
ELB improved by 0.908542
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.061
ELB improved by 0.987072
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.076
ELB improved by 0.984375
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.167
ELB improved by 0.909788
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.376
ELB improved by 0.791059
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.718
ELB improved by 0.657576
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.184
ELB improved by 0.534461
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.747
ELB improved by 0.436864
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.377
ELB improved by 0.369212
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.048
ELB improved by 0.329773
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.731
ELB improved by 0.316562
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.4
ELB improved by 0.330775
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.028
ELB improved by 0.371875
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.604
ELB improved by 0.424627
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.142
ELB improved by 0.462253
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.673
ELB improved by 0.468172
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.236
ELB improved by 0.437548
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.853
ELB improved by 0.383085
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.529
ELB improved by 0.324139
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.265
ELB improved by 0.263476
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.062
ELB improved by 0.203401
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.91
ELB improved by 0.152105
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.796
ELB improved by 0.114017
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.708
ELB improved by 0.0880554
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.637
ELB improved by 0.0710074
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.577
ELB improved by 0.0597892
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.525
ELB improved by 0.0520917
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.478
ELB improved by 0.0463287
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.437
ELB improved by 0.0414593
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.4
ELB improved by 0.0368789
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.368
ELB improved by 0.0323632
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.34
ELB improved by 0.0279792
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.316
ELB improved by 0.0239298
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.295
ELB improved by 0.0203956
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.278
ELB improved by 0.0174518
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.263
ELB improved by 0.0150718
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.25
ELB improved by 0.0131713
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.238
ELB improved by 0.0116514
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.228
ELB improved by 0.0104228
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.218
ELB improved by 0.00941376
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.184
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-602.424
ELB improved by 242.76
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-542.843
ELB improved by 59.581
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.956
ELB improved by 51.8872
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.559
ELB improved by 28.3972
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.599
ELB improved by 10.96
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.201
ELB improved by 5.39806
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.983
ELB improved by 4.21776
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.121
ELB improved by 3.86203
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.455
ELB improved by 3.66591
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.983
ELB improved by 3.47243
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.767
ELB improved by 3.21508
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.903
ELB improved by 2.86432
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.471
ELB improved by 2.43202
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.504
ELB improved by 1.96708
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.978
ELB improved by 1.52589
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.832
ELB improved by 1.1461
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.989
ELB improved by 0.843183
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.371
ELB improved by 0.617763
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.911
ELB improved by 0.459674
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.559
ELB improved by 0.352545
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.279
ELB improved by 0.28013
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.049
ELB improved by 0.229998
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.855
ELB improved by 0.193944
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.688
ELB improved by 0.166952
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.542
ELB improved by 0.146031
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.412
ELB improved by 0.129385
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.297
ELB improved by 0.115894
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.192
ELB improved by 0.104825
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.096
ELB improved by 0.0956768
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.008
ELB improved by 0.0880932
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.926
ELB improved by 0.0818104
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.85
ELB improved by 0.0766313
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.777
ELB improved by 0.072406
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.708
ELB improved by 0.0690213
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.642
ELB improved by 0.0663927
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.577
ELB improved by 0.0644595
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.514
ELB improved by 0.0631815
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.452
ELB improved by 0.0625371
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.389
ELB improved by 0.0625223
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.326
ELB improved by 0.0631517
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.261
ELB improved by 0.0644589
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.195
ELB improved by 0.0665002
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.126
ELB improved by 0.0693581
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.052
ELB improved by 0.0731482
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.974
ELB improved by 0.0780277
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.89
ELB improved by 0.0842087
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.798
ELB improved by 0.0919757
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.696
ELB improved by 0.10171
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.583
ELB improved by 0.11392
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.453
ELB improved by 0.129279
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.305
ELB improved by 0.148652
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.132
ELB improved by 0.17309
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.928
ELB improved by 0.203705
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.686
ELB improved by 0.241337
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.401
ELB improved by 0.285939
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.065
ELB improved by 0.336012
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.676
ELB improved by 0.388837
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.234
ELB improved by 0.441873
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.74
ELB improved by 0.494152
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.193
ELB improved by 0.546414
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.593
ELB improved by 0.600498
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.934
ELB improved by 0.658819
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.211
ELB improved by 0.72271
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.424
ELB improved by 0.786876
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.830695
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.774
ELB improved by 0.819876
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.037
ELB improved by 0.7371
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.427
ELB improved by 0.609885
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.946
ELB improved by 0.480351
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.576
ELB improved by 0.370354
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.292
ELB improved by 0.284118
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.073
ELB improved by 0.219
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.902
ELB improved by 0.170644
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.768
ELB improved by 0.134815
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.659
ELB improved by 0.108037
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.572
ELB improved by 0.0877223
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.5
ELB improved by 0.0720485
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.44
ELB improved by 0.0597696
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.39
ELB improved by 0.050032
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.348
ELB improved by 0.0422391
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.312
ELB improved by 0.0359604
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.281
ELB improved by 0.0308752
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.254
ELB improved by 0.0267387
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.231
ELB improved by 0.0233616
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.21
ELB improved by 0.0205953
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.192
ELB improved by 0.018323
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.175
ELB improved by 0.0164521
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.16
ELB improved by 0.0149087
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.147
ELB improved by 0.0136331
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.134
ELB improved by 0.0125768
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.123
ELB improved by 0.0116999
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.112
ELB improved by 0.0109688
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.101
ELB improved by 0.0103545
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.091
ELB improved by 0.00983201
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.337 0.203 2.529
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.049 | 0.008 | 0.058 | |
| getPIPs | 0.068 | 0.015 | 0.083 | |
| graper | 0.080 | 0.003 | 0.083 | |
| makeExampleData | 0.01 | 0.00 | 0.01 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.000 | 0.012 | |
| plotELBO | 0.308 | 0.011 | 0.319 | |
| plotGroupPenalties | 0.976 | 0.004 | 0.980 | |
| plotPosterior | 0.658 | 0.003 | 0.661 | |
| predict.graper | 2.061 | 0.016 | 2.078 | |
| print.graper | 0.048 | 0.004 | 0.052 | |