Britta Velten
| Snapshot Date: 2026-03-31 13:40 -0400 (Tue, 31 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-01 13:06 -0400 (Wed, 01 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | 4.6.0 alpha (2026-03-30 r89742) | 4816 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-03-28 r89739) | 4539 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 933/2374 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-31 19:40:50 -0400 (Tue, 31 Mar 2026) |
| EndedAt: 2026-03-31 19:41:22 -0400 (Tue, 31 Mar 2026) |
| EllapsedTime: 31.3 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-03-28 r89739)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.3.1
* using session charset: UTF-8
* current time: 2026-03-31 23:40:50 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’
* used SDK: ‘MacOSX26.2.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’ using SDK: ‘MacOSX26.2.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-03-28 r89739)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-919.54
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.695
ELB improved by 341.845
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.482
ELB improved by 60.2125
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.567
ELB improved by 34.9147
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.476
ELB improved by 14.0914
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.269
ELB improved by 6.20742
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.002
ELB improved by 4.26684
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.179
ELB improved by 3.82313
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.307
ELB improved by 3.87206
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.131
ELB improved by 4.17574
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.519
ELB improved by 4.61187
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.543
ELB improved by 4.97552
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.61
ELB improved by 4.93363
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.313
ELB improved by 4.29714
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.016
ELB improved by 3.29666
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.684
ELB improved by 2.33193
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.054
ELB improved by 1.62973
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.913
ELB improved by 1.14156
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.111
ELB improved by 0.801544
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.504
ELB improved by 0.607001
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.992
ELB improved by 0.512129
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.522
ELB improved by 0.469914
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.065
ELB improved by 0.457678
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.598
ELB improved by 0.466737
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.103
ELB improved by 0.494967
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.558
ELB improved by 0.544717
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.934
ELB improved by 0.624053
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.181
ELB improved by 0.752746
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.202
ELB improved by 0.979379
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.788
ELB improved by 1.41419
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.609
ELB improved by 2.1787
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.613
ELB improved by 2.9956
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.289
ELB improved by 3.32396
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.954
ELB improved by 3.33583
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.845
ELB improved by 3.1091
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.259
ELB improved by 2.58562
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.371
ELB improved by 1.88815
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.127
ELB improved by 1.24406
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.341
ELB improved by 0.785377
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.838
ELB improved by 0.503176
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.501
ELB improved by 0.337435
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.263
ELB improved by 0.23819
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.087
ELB improved by 0.17578
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.952
ELB improved by 0.134381
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.847
ELB improved by 0.105605
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.762
ELB improved by 0.0848319
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.693
ELB improved by 0.0693712
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.635
ELB improved by 0.0575752
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.587
ELB improved by 0.0483882
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.545
ELB improved by 0.041109
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.51
ELB improved by 0.0352575
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.48
ELB improved by 0.030496
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.453
ELB improved by 0.0265814
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.43
ELB improved by 0.023335
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.409
ELB improved by 0.0206225
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.391
ELB improved by 0.0183418
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.374
ELB improved by 0.0164133
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.36
ELB improved by 0.0147747
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.346
ELB improved by 0.0133764
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.334
ELB improved by 0.0121782
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.323
ELB improved by 0.0111477
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.313
ELB improved by 0.0102583
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.303
ELB improved by 0.00948796
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-845.332
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-607.569
ELB improved by 237.762
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-550.657
ELB improved by 56.9119
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.806
ELB improved by 48.8518
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.541
ELB improved by 28.2641
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.916
ELB improved by 12.6249
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.031
ELB improved by 6.885
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.259
ELB improved by 5.77217
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.195
ELB improved by 6.06391
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.893
ELB improved by 6.30263
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.137
ELB improved by 5.7561
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.733
ELB improved by 4.40331
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.816
ELB improved by 2.91701
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.999
ELB improved by 1.81777
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.85
ELB improved by 1.14866
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.083
ELB improved by 0.766492
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.537
ELB improved by 0.545877
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.126
ELB improved by 0.41194
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.801
ELB improved by 0.325024
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.536
ELB improved by 0.264852
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.315
ELB improved by 0.220913
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.127
ELB improved by 0.187501
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.966
ELB improved by 0.161316
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.826
ELB improved by 0.140323
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.702
ELB improved by 0.123191
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.593
ELB improved by 0.10901
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.496
ELB improved by 0.097134
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.409
ELB improved by 0.0870878
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.331
ELB improved by 0.0785163
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.26
ELB improved by 0.0711477
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.195
ELB improved by 0.0647708
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.136
ELB improved by 0.0592192
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.081
ELB improved by 0.0543602
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.031
ELB improved by 0.0500866
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.985
ELB improved by 0.0463115
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.942
ELB improved by 0.0429632
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.902
ELB improved by 0.0399826
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.865
ELB improved by 0.0373202
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.83
ELB improved by 0.0349346
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.797
ELB improved by 0.0327908
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.766
ELB improved by 0.0308588
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.737
ELB improved by 0.0291131
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.709
ELB improved by 0.027532
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.683
ELB improved by 0.0260964
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.658
ELB improved by 0.0247899
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.635
ELB improved by 0.0235981
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.612
ELB improved by 0.0225086
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.591
ELB improved by 0.0215103
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.57
ELB improved by 0.0205936
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.55
ELB improved by 0.0197499
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.531
ELB improved by 0.0189717
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.513
ELB improved by 0.0182522
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.496
ELB improved by 0.0175854
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.479
ELB improved by 0.0169661
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.462
ELB improved by 0.0163894
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.446
ELB improved by 0.0158513
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.431
ELB improved by 0.015348
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.416
ELB improved by 0.0148761
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.402
ELB improved by 0.0144326
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.388
ELB improved by 0.0140149
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.374
ELB improved by 0.0136207
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.361
ELB improved by 0.0132479
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.348
ELB improved by 0.0128946
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.335
ELB improved by 0.0125593
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.323
ELB improved by 0.0122405
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.311
ELB improved by 0.0119369
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.3
ELB improved by 0.0116476
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.288
ELB improved by 0.0113715
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.277
ELB improved by 0.0111079
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.266
ELB improved by 0.010856
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.256
ELB improved by 0.0106152
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.245
ELB improved by 0.0103851
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.235
ELB improved by 0.0101652
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.225
ELB improved by 0.0099551
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-869.188
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-606.778
ELB improved by 262.41
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.998
ELB improved by 61.7798
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.607
ELB improved by 51.3915
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.968
ELB improved by 28.6387
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.069
ELB improved by 12.8993
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.867
ELB improved by 8.2016
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.467
ELB improved by 7.40006
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.367
ELB improved by 7.09998
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.146
ELB improved by 6.22175
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.398
ELB improved by 4.74798
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.183
ELB improved by 3.21429
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.135
ELB improved by 2.04789
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.791
ELB improved by 1.34418
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.844
ELB improved by 0.947152
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.144
ELB improved by 0.699733
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.619
ELB improved by 0.525495
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.22
ELB improved by 0.398982
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.91
ELB improved by 0.309967
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.661
ELB improved by 0.248736
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.455
ELB improved by 0.20595
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.28
ELB improved by 0.174806
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.129
ELB improved by 0.151142
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.997
ELB improved by 0.132551
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.879
ELB improved by 0.117603
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.774
ELB improved by 0.105397
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.678
ELB improved by 0.0953263
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.591
ELB improved by 0.0869639
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.511
ELB improved by 0.0799985
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.437
ELB improved by 0.0741986
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.368
ELB improved by 0.0693904
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.302
ELB improved by 0.0654439
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.24
ELB improved by 0.0622622
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.18
ELB improved by 0.0597749
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.122
ELB improved by 0.0579318
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.066
ELB improved by 0.0566972
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.01
ELB improved by 0.0560437
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.954
ELB improved by 0.0559446
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.897
ELB improved by 0.0563656
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.84
ELB improved by 0.0572583
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.782
ELB improved by 0.0585575
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.721
ELB improved by 0.0601885
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.659
ELB improved by 0.0620831
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.595
ELB improved by 0.0641981
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.529
ELB improved by 0.0665262
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.459
ELB improved by 0.0690911
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.388
ELB improved by 0.0719318
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.312
ELB improved by 0.0750864
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.234
ELB improved by 0.0785843
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.151
ELB improved by 0.0824467
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.065
ELB improved by 0.08669
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.973
ELB improved by 0.091329
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.877
ELB improved by 0.0963774
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.775
ELB improved by 0.101845
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.667
ELB improved by 0.107731
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.553
ELB improved by 0.11402
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.433
ELB improved by 0.120669
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.305
ELB improved by 0.1276
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.17
ELB improved by 0.134691
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.029
ELB improved by 0.141764
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.88
ELB improved by 0.148586
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.725
ELB improved by 0.154874
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.565
ELB improved by 0.160304
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.4
ELB improved by 0.16454
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.233
ELB improved by 0.167264
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.065
ELB improved by 0.168213
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.898
ELB improved by 0.16722
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.733
ELB improved by 0.164236
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.574
ELB improved by 0.159342
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.421
ELB improved by 0.152746
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.277
ELB improved by 0.144752
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.141
ELB improved by 0.135726
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.015
ELB improved by 0.12606
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.899
ELB improved by 0.116127
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.792
ELB improved by 0.106256
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.696
ELB improved by 0.0967121
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.608
ELB improved by 0.0876865
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.529
ELB improved by 0.0793008
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.457
ELB improved by 0.0716133
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.393
ELB improved by 0.0646327
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.334
ELB improved by 0.0583323
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.282
ELB improved by 0.0526642
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.234
ELB improved by 0.0475704
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.191
ELB improved by 0.0429916
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.152
ELB improved by 0.0388718
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.117
ELB improved by 0.0351615
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.085
ELB improved by 0.0318179
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.056
ELB improved by 0.0288042
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.03
ELB improved by 0.0260884
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.007
ELB improved by 0.0236426
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.985
ELB improved by 0.0214415
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.966
ELB improved by 0.019462
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.948
ELB improved by 0.017683
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.932
ELB improved by 0.0160851
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.917
ELB improved by 0.0146501
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.904
ELB improved by 0.0133617
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.892
ELB improved by 0.0122047
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.881
ELB improved by 0.0111655
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.87
ELB improved by 0.0102317
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.861
ELB improved by 0.00939206
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-893.398
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-573.564
ELB improved by 319.834
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-515.921
ELB improved by 57.6426
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.259
ELB improved by 33.662
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.145
ELB improved by 14.1146
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.696
ELB improved by 6.44915
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.951
ELB improved by 4.74448
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.29
ELB improved by 4.66119
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.299
ELB improved by 4.9911
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.089
ELB improved by 5.20961
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.216
ELB improved by 4.87324
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.325
ELB improved by 3.89109
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.614
ELB improved by 2.71058
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.79
ELB improved by 1.82381
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.486
ELB improved by 1.30493
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.508
ELB improved by 0.977893
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.786
ELB improved by 0.721479
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.248
ELB improved by 0.538082
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.831
ELB improved by 0.41698
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.501
ELB improved by 0.329858
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.236
ELB improved by 0.265321
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.017
ELB improved by 0.218582
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.833
ELB improved by 0.184682
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.673
ELB improved by 0.159349
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.534
ELB improved by 0.139688
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.41
ELB improved by 0.123922
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.299
ELB improved by 0.110969
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.199
ELB improved by 0.100144
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.108
ELB improved by 0.0909871
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.024
ELB improved by 0.0831748
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.948
ELB improved by 0.0764669
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.877
ELB improved by 0.0706799
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.812
ELB improved by 0.0656703
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.75
ELB improved by 0.0613235
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.693
ELB improved by 0.0575471
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.638
ELB improved by 0.0542658
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.587
ELB improved by 0.0514175
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.538
ELB improved by 0.0489511
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.491
ELB improved by 0.0468241
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.446
ELB improved by 0.045001
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.403
ELB improved by 0.0434523
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.361
ELB improved by 0.0421534
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.32
ELB improved by 0.0410839
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.279
ELB improved by 0.0402267
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.24
ELB improved by 0.0395681
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.201
ELB improved by 0.0390968
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.162
ELB improved by 0.0388039
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.123
ELB improved by 0.0386827
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.084
ELB improved by 0.0387284
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.046
ELB improved by 0.0389379
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.006
ELB improved by 0.0393101
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.966
ELB improved by 0.0398452
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.926
ELB improved by 0.0405453
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.884
ELB improved by 0.041414
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.842
ELB improved by 0.0424569
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.798
ELB improved by 0.0436812
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.753
ELB improved by 0.0450963
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.706
ELB improved by 0.0467139
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.658
ELB improved by 0.0485484
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.607
ELB improved by 0.0506174
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.554
ELB improved by 0.0529423
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.499
ELB improved by 0.0555496
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.44
ELB improved by 0.0584717
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.379
ELB improved by 0.0617492
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.313
ELB improved by 0.0654331
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.244
ELB improved by 0.0695887
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.169
ELB improved by 0.0743005
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.09
ELB improved by 0.0796794
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.004
ELB improved by 0.085873
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.911
ELB improved by 0.0930813
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.809
ELB improved by 0.10158
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.697
ELB improved by 0.111754
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.573
ELB improved by 0.124152
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.434
ELB improved by 0.139563
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.274
ELB improved by 0.159123
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.09
ELB improved by 0.184428
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.872
ELB improved by 0.217604
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.611
ELB improved by 0.26124
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.293
ELB improved by 0.318222
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.901
ELB improved by 0.391476
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.421
ELB improved by 0.480626
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.852
ELB improved by 0.568685
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.232
ELB improved by 0.619751
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.606
ELB improved by 0.626143
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.984
ELB improved by 0.621893
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.336
ELB improved by 0.648828
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.552
ELB improved by 0.783078
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.385
ELB improved by 1.1676
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.787
ELB improved by 1.59749
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.211
ELB improved by 1.57605
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.934
ELB improved by 1.2769
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.955
ELB improved by 0.979335
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.261
ELB improved by 0.694117
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.825
ELB improved by 0.435509
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.526
ELB improved by 0.29927
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.275
ELB improved by 0.251187
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.046
ELB improved by 0.228749
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.855
ELB improved by 0.191292
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.716
ELB improved by 0.139058
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.62
ELB improved by 0.0962596
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.548
ELB improved by 0.0715914
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.489
ELB improved by 0.0591872
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.436
ELB improved by 0.052611
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.388
ELB improved by 0.0482422
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.343
ELB improved by 0.0446423
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.302
ELB improved by 0.0417182
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.262
ELB improved by 0.039867
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.223
ELB improved by 0.0392759
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.183
ELB improved by 0.0396575
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.143
ELB improved by 0.0402956
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.102
ELB improved by 0.040188
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.064
ELB improved by 0.0383215
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.03
ELB improved by 0.0341739
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.002
ELB improved by 0.0281833
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.98
ELB improved by 0.0216222
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.964
ELB improved by 0.0158224
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.953
ELB improved by 0.0114842
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.944
ELB improved by 0.00861075
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.135 0.103 1.251
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.029 | 0.010 | 0.038 | |
| getPIPs | 0.027 | 0.008 | 0.034 | |
| graper | 0.044 | 0.010 | 0.055 | |
| makeExampleData | 0.004 | 0.000 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.004 | 0.000 | 0.004 | |
| plotELBO | 0.120 | 0.009 | 0.129 | |
| plotGroupPenalties | 0.358 | 0.007 | 0.368 | |
| plotPosterior | 0.328 | 0.015 | 0.343 | |
| predict.graper | 1.017 | 0.030 | 1.054 | |
| print.graper | 0.026 | 0.004 | 0.030 | |