Britta Velten
| Snapshot Date: 2026-03-10 13:40 -0400 (Tue, 10 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-11 11:33 -0400 (Wed, 11 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4719 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 928/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-10 16:11:12 -0400 (Tue, 10 Mar 2026) |
| EndedAt: 2026-03-10 16:11:39 -0400 (Tue, 10 Mar 2026) |
| EllapsedTime: 27.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-03-01 r89506)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Sonoma 14.8.3
* using session charset: UTF-8
* current time: 2026-03-10 20:11:12 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’
* used SDK: ‘MacOSX14.4.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.3.9.4)’ using SDK: ‘MacOSX14.4.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-908.602
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-597.078
ELB improved by 311.524
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-538.973
ELB improved by 58.1047
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.772
ELB improved by 40.201
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.03
ELB improved by 19.7427
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.825
ELB improved by 9.20474
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.582
ELB improved by 5.24337
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.64
ELB improved by 3.94133
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.039
ELB improved by 3.60122
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.515
ELB improved by 3.52438
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.068
ELB improved by 3.44637
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.863
ELB improved by 3.20498
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.146
ELB improved by 2.71736
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.089
ELB improved by 2.05663
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.671
ELB improved by 1.41872
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.721
ELB improved by 0.949977
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.06
ELB improved by 0.66071
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.566
ELB improved by 0.493538
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.17
ELB improved by 0.39598
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.834
ELB improved by 0.336808
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.535
ELB improved by 0.298326
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.266
ELB improved by 0.268815
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.026
ELB improved by 0.240648
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.814
ELB improved by 0.211859
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.629
ELB improved by 0.185024
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.466
ELB improved by 0.162742
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.321
ELB improved by 0.145323
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.189
ELB improved by 0.131774
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.068
ELB improved by 0.121077
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.955
ELB improved by 0.112559
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.85
ELB improved by 0.105782
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.749
ELB improved by 0.100411
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.653
ELB improved by 0.0961631
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.56
ELB improved by 0.0928009
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.47
ELB improved by 0.0901342
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.382
ELB improved by 0.0880176
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.296
ELB improved by 0.0863419
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.211
ELB improved by 0.0850254
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.127
ELB improved by 0.0840066
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.043
ELB improved by 0.0832388
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.961
ELB improved by 0.0826868
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.878
ELB improved by 0.0823247
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.796
ELB improved by 0.0821346
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.714
ELB improved by 0.0821062
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.632
ELB improved by 0.0822362
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.549
ELB improved by 0.0825291
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.466
ELB improved by 0.082997
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.383
ELB improved by 0.0836613
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.298
ELB improved by 0.084553
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.213
ELB improved by 0.0857149
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.125
ELB improved by 0.087203
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.036
ELB improved by 0.089089
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.945
ELB improved by 0.0914633
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.85
ELB improved by 0.0944397
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.752
ELB improved by 0.0981609
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.649
ELB improved by 0.102808
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.541
ELB improved by 0.108614
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.425
ELB improved by 0.115886
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.3
ELB improved by 0.125046
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.163
ELB improved by 0.136697
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.011
ELB improved by 0.151767
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.84
ELB improved by 0.171804
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.64
ELB improved by 0.199635
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.399
ELB improved by 0.240866
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.092
ELB improved by 0.306879
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.675
ELB improved by 0.417117
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.093
ELB improved by 0.581965
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.339
ELB improved by 0.754007
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.462
ELB improved by 0.877375
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.484
ELB improved by 0.97781
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.4
ELB improved by 1.08376
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.211
ELB improved by 1.18933
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.968
ELB improved by 1.24302
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.78
ELB improved by 1.18796
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.794
ELB improved by 0.986015
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.098
ELB improved by 0.695496
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.634
ELB improved by 0.463996
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.302
ELB improved by 0.332495
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.023
ELB improved by 0.278748
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.731
ELB improved by 0.29179
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.364
ELB improved by 0.367538
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.921
ELB improved by 0.44325
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.522
ELB improved by 0.398073
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.264
ELB improved by 0.257953
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.122
ELB improved by 0.14255
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.043
ELB improved by 0.0785735
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.996
ELB improved by 0.0471404
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.965
ELB improved by 0.0315801
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.941
ELB improved by 0.0232413
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.923
ELB improved by 0.0183064
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.908
ELB improved by 0.0151189
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.895
ELB improved by 0.0129142
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.884
ELB improved by 0.0113063
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.874
ELB improved by 0.0100835
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.865
ELB improved by 0.00912133
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-896.092
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-588.753
ELB improved by 307.339
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.88
ELB improved by 61.8727
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.507
ELB improved by 42.3731
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.418
ELB improved by 20.0893
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.156
ELB improved by 8.26206
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.911
ELB improved by 4.24437
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.96
ELB improved by 2.9516
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.503
ELB improved by 2.45716
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.266
ELB improved by 2.23636
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.142
ELB improved by 2.12476
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.084
ELB improved by 2.05733
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.081
ELB improved by 2.00332
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.143
ELB improved by 1.93755
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.312
ELB improved by 1.831
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.655
ELB improved by 1.65739
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.238
ELB improved by 1.41692
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.087
ELB improved by 1.15073
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.176
ELB improved by 0.911128
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.457
ELB improved by 0.719495
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.889
ELB improved by 0.567543
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.443
ELB improved by 0.446159
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.089
ELB improved by 0.353708
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.802
ELB improved by 0.287518
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.56
ELB improved by 0.241635
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.35
ELB improved by 0.209729
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.163
ELB improved by 0.186895
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.994
ELB improved by 0.169806
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.837
ELB improved by 0.156321
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.692
ELB improved by 0.145086
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.557
ELB improved by 0.135262
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.431
ELB improved by 0.126341
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.313
ELB improved by 0.118035
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.202
ELB improved by 0.110192
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.1
ELB improved by 0.102748
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.004
ELB improved by 0.0956885
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.915
ELB improved by 0.0890219
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.832
ELB improved by 0.0827663
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.755
ELB improved by 0.0769376
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.684
ELB improved by 0.0715445
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.617
ELB improved by 0.0665869
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.555
ELB improved by 0.0620556
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.497
ELB improved by 0.0579342
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.443
ELB improved by 0.0542007
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.392
ELB improved by 0.0508299
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.344
ELB improved by 0.0477945
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.299
ELB improved by 0.0450676
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.257
ELB improved by 0.0426227
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.216
ELB improved by 0.0404354
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.178
ELB improved by 0.0384835
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.141
ELB improved by 0.0367471
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.106
ELB improved by 0.0352091
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.072
ELB improved by 0.0338551
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.039
ELB improved by 0.0326732
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.008
ELB improved by 0.0316541
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.977
ELB improved by 0.030791
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.947
ELB improved by 0.0300792
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.917
ELB improved by 0.0295167
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.888
ELB improved by 0.0291036
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.859
ELB improved by 0.0288425
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.831
ELB improved by 0.0287383
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.802
ELB improved by 0.0287986
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.773
ELB improved by 0.0290336
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.743
ELB improved by 0.0294568
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.713
ELB improved by 0.0300845
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.682
ELB improved by 0.0309372
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.65
ELB improved by 0.0320393
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.617
ELB improved by 0.03342
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.582
ELB improved by 0.0351137
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.544
ELB improved by 0.0371608
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.505
ELB improved by 0.0396084
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.462
ELB improved by 0.0425106
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.416
ELB improved by 0.0459288
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.367
ELB improved by 0.0499313
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.312
ELB improved by 0.0545922
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.252
ELB improved by 0.059989
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.186
ELB improved by 0.0661971
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.112
ELB improved by 0.0732829
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.031
ELB improved by 0.0812917
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.941
ELB improved by 0.0902313
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.841
ELB improved by 0.100051
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.73
ELB improved by 0.110614
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.609
ELB improved by 0.121672
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.476
ELB improved by 0.132841
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.332
ELB improved by 0.143591
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.179
ELB improved by 0.153259
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.018
ELB improved by 0.161102
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.851
ELB improved by 0.166383
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.683
ELB improved by 0.168488
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.516
ELB improved by 0.16705
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.354
ELB improved by 0.162031
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.2
ELB improved by 0.15375
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.057
ELB improved by 0.142826
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.927
ELB improved by 0.130067
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.811
ELB improved by 0.116333
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.708
ELB improved by 0.102409
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.62
ELB improved by 0.088933
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.543
ELB improved by 0.0763562
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.478
ELB improved by 0.0649521
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.423
ELB improved by 0.0548447
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.377
ELB improved by 0.0460467
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.339
ELB improved by 0.0384963
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.307
ELB improved by 0.0320882
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.28
ELB improved by 0.0266964
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.258
ELB improved by 0.0221899
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.239
ELB improved by 0.0184426
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.224
ELB improved by 0.0153385
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.211
ELB improved by 0.0127746
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.201
ELB improved by 0.0106614
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.192
ELB improved by 0.00892225
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.21
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.012
ELB improved by 303.198
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.056
ELB improved by 57.9565
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.881
ELB improved by 39.1749
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.854
ELB improved by 20.0266
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.99
ELB improved by 9.86387
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.288
ELB improved by 6.70211
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.191
ELB improved by 6.09677
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.925
ELB improved by 6.26645
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.408
ELB improved by 6.51713
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.224
ELB improved by 6.18412
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.217
ELB improved by 5.00627
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.671
ELB improved by 3.54622
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.27
ELB improved by 2.40093
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.632
ELB improved by 1.63807
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.491
ELB improved by 1.14117
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.67
ELB improved by 0.821032
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.056
ELB improved by 0.614001
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.58
ELB improved by 0.476307
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.199
ELB improved by 0.380978
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.886
ELB improved by 0.312273
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.625
ELB improved by 0.261018
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.404
ELB improved by 0.221703
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.213
ELB improved by 0.190867
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.047
ELB improved by 0.166235
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.9
ELB improved by 0.146249
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.77
ELB improved by 0.12981
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.654
ELB improved by 0.116121
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.55
ELB improved by 0.104594
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.455
ELB improved by 0.0947837
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.369
ELB improved by 0.0863547
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.29
ELB improved by 0.0790467
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.217
ELB improved by 0.0726573
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.15
ELB improved by 0.0670274
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.088
ELB improved by 0.0620313
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.03
ELB improved by 0.0575685
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.977
ELB improved by 0.0535585
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.927
ELB improved by 0.0499362
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.88
ELB improved by 0.0466486
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.836
ELB improved by 0.0436525
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.796
ELB improved by 0.0409123
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.757
ELB improved by 0.0383985
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.721
ELB improved by 0.0360864
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.687
ELB improved by 0.0339553
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.655
ELB improved by 0.0319876
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.625
ELB improved by 0.0301681
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.596
ELB improved by 0.0284839
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.57
ELB improved by 0.0269234
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.544
ELB improved by 0.0254765
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.52
ELB improved by 0.0241342
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.497
ELB improved by 0.0228884
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.475
ELB improved by 0.0217319
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.455
ELB improved by 0.0206577
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.435
ELB improved by 0.01966
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.416
ELB improved by 0.0187329
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.398
ELB improved by 0.0178714
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.381
ELB improved by 0.0170705
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.365
ELB improved by 0.0163258
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.349
ELB improved by 0.0156331
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.334
ELB improved by 0.0149887
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.32
ELB improved by 0.0143889
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.306
ELB improved by 0.0138305
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.293
ELB improved by 0.0133104
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.28
ELB improved by 0.0128258
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.268
ELB improved by 0.0123739
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.256
ELB improved by 0.0119525
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.244
ELB improved by 0.0115592
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.233
ELB improved by 0.0111921
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.222
ELB improved by 0.0108491
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.212
ELB improved by 0.0105285
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.201
ELB improved by 0.0102287
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.191
ELB improved by 0.00994818
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-899.941
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-559.165
ELB improved by 340.776
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.529
ELB improved by 62.6363
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.037
ELB improved by 33.492
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.853
ELB improved by 13.1845
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.879
ELB improved by 5.97356
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.057
ELB improved by 3.8219
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.996
ELB improved by 3.06092
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.264
ELB improved by 2.73227
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.702
ELB improved by 2.56194
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.248
ELB improved by 2.45396
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.866
ELB improved by 2.3815
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.527
ELB improved by 2.33961
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.209
ELB improved by 2.31795
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.926
ELB improved by 2.28299
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.747
ELB improved by 2.17867
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.79
ELB improved by 1.95677
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.172
ELB improved by 1.61876
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.941
ELB improved by 1.2312
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.059
ELB improved by 0.881068
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.447
ELB improved by 0.612604
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.021
ELB improved by 0.425557
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.718
ELB improved by 0.303031
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.492
ELB improved by 0.225795
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.315
ELB improved by 0.177491
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.168
ELB improved by 0.146608
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.042
ELB improved by 0.126008
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.931
ELB improved by 0.111536
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.83
ELB improved by 0.100827
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.737
ELB improved by 0.0925381
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.652
ELB improved by 0.0858883
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.571
ELB improved by 0.0804134
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.495
ELB improved by 0.0758283
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.423
ELB improved by 0.0719523
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.355
ELB improved by 0.0686692
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.289
ELB improved by 0.0659042
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.225
ELB improved by 0.0636103
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.163
ELB improved by 0.0617592
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.103
ELB improved by 0.060335
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.044
ELB improved by 0.0593256
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.985
ELB improved by 0.0587148
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.927
ELB improved by 0.0584698
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.868
ELB improved by 0.0585288
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.809
ELB improved by 0.0587897
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.75
ELB improved by 0.0591095
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.691
ELB improved by 0.0593201
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.632
ELB improved by 0.0592633
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.573
ELB improved by 0.0588334
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.515
ELB improved by 0.0580049
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.458
ELB improved by 0.0568314
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.402
ELB improved by 0.0554182
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.349
ELB improved by 0.0538885
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.296
ELB improved by 0.0523597
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.245
ELB improved by 0.0509331
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.196
ELB improved by 0.0496941
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.147
ELB improved by 0.0487161
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.099
ELB improved by 0.0480646
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.051
ELB improved by 0.0477991
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.003
ELB improved by 0.0479723
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.954
ELB improved by 0.048625
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.905
ELB improved by 0.0497748
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.853
ELB improved by 0.0514006
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.8
ELB improved by 0.0534289
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.744
ELB improved by 0.0557379
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.686
ELB improved by 0.0581966
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.625
ELB improved by 0.0607444
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.562
ELB improved by 0.0634835
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.495
ELB improved by 0.0667408
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.424
ELB improved by 0.0710885
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.346
ELB improved by 0.077372
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.26
ELB improved by 0.0868363
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.158
ELB improved by 0.101479
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.033
ELB improved by 0.124848
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.87
ELB improved by 0.163628
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.64
ELB improved by 0.229522
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.304
ELB improved by 0.335877
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.826
ELB improved by 0.477851
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.208
ELB improved by 0.618335
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.489
ELB improved by 0.719498
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.738
ELB improved by 0.750942
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.038
ELB improved by 0.699288
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.436
ELB improved by 0.602634
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.935
ELB improved by 0.501186
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.526
ELB improved by 0.408343
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.199
ELB improved by 0.327415
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.939
ELB improved by 0.259318
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.736
ELB improved by 0.203487
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.577
ELB improved by 0.15861
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.454
ELB improved by 0.123318
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.358
ELB improved by 0.0964173
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.281
ELB improved by 0.0767782
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.218
ELB improved by 0.0631857
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.163
ELB improved by 0.0542797
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.115
ELB improved by 0.048593
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.07
ELB improved by 0.0446532
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.029
ELB improved by 0.0411662
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.992
ELB improved by 0.0372663
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.959
ELB improved by 0.0327004
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.931
ELB improved by 0.0277659
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.908
ELB improved by 0.0229981
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.889
ELB improved by 0.0188342
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.874
ELB improved by 0.0154616
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.861
ELB improved by 0.0128553
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.85
ELB improved by 0.0108839
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.841
ELB improved by 0.0093955
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
0.972 0.082 1.060
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.011 | 0.006 | 0.024 | |
| getPIPs | 0.010 | 0.004 | 0.014 | |
| graper | 0.017 | 0.006 | 0.023 | |
| makeExampleData | 0.002 | 0.001 | 0.002 | |
| makeExampleDataWithUnequalGroups | 0.002 | 0.000 | 0.002 | |
| plotELBO | 0.103 | 0.011 | 0.115 | |
| plotGroupPenalties | 0.318 | 0.006 | 0.335 | |
| plotPosterior | 0.288 | 0.012 | 0.300 | |
| predict.graper | 0.213 | 0.035 | 0.258 | |
| print.graper | 0.010 | 0.004 | 0.014 | |