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###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Rigraphlib
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’
* installing *source* package ‘Rigraphlib’ ...
** this is package ‘Rigraphlib’ version ‘1.3.2’
** using staged installation
-- Version number: 1.0.0
-- The C compiler identification is AppleClang 17.0.0.17000604
-- The CXX compiler identification is AppleClang 17.0.0.17000604
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /Library/Developer/CommandLineTools/usr/bin/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /Library/Developer/CommandLineTools/usr/bin/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Performing Test COMPILER_SUPPORTS_UNKNOWN_WARNING_OPTION_FLAG
-- Performing Test COMPILER_SUPPORTS_UNKNOWN_WARNING_OPTION_FLAG - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ENUMVAL_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ENUMVAL_ATTR - Success
-- Thread-local storage: supported (__thread)
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Found BLAS: /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libRblas.0.dylib
-- Found LAPACK: /Library/Frameworks/R.framework/Versions/4.6/Resources/lib/libRlapack.dylib
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for _stricmp
-- Looking for _stricmp - not found
-- Looking for _strnicmp
-- Looking for _strnicmp - not found
-- Looking for strdup
-- Looking for strdup - found
-- Looking for strndup
-- Looking for strndup - found
-- Looking for include file xlocale.h
-- Looking for include file xlocale.h - found
-- Looking for uselocale
-- Looking for uselocale - found
-- Looking for _configthreadlocale
-- Looking for _configthreadlocale - not found
-- Performing Test HAVE__UMUL128
-- Performing Test HAVE__UMUL128 - Failed
-- Performing Test HAVE___UMULH
-- Performing Test HAVE___UMULH - Failed
-- Looking for C++ include sys/types.h
-- Looking for C++ include sys/types.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for C++ include stddef.h
-- Looking for C++ include stddef.h - found
-- Check size of __uint128_t
-- Check size of __uint128_t - done
-- Performing Test HAVE__POPCNT64
-- Performing Test HAVE__POPCNT64 - Failed
-- Performing Test HAVE__POPCNT
-- Performing Test HAVE__POPCNT - Failed
-- Performing Test HAVE__BITSCANFORWARD64
-- Performing Test HAVE__BITSCANFORWARD64 - Failed
-- Performing Test HAVE__BITSCANFORWARD
-- Performing Test HAVE__BITSCANFORWARD - Failed
-- Performing Test HAVE__BITSCANREVERSE64
-- Performing Test HAVE__BITSCANREVERSE64 - Failed
-- Performing Test HAVE__BITSCANREVERSE
-- Performing Test HAVE__BITSCANREVERSE - Failed
-- Performing Test HAVE_BUILTIN_OVERFLOW
-- Performing Test HAVE_BUILTIN_OVERFLOW - Success
-- Looking for _LIBCPP_VERSION
-- Looking for _LIBCPP_VERSION - found
-- Looking for __GLIBCXX__
-- Looking for __GLIBCXX__ - not found
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
--
-- -----[ Build configuration ]----
-- Version: 1.0.0
-- CMake build type: Release
-- Library type: static
-- igraph_int_t size: 64 bits
--
-- ----------[ Features ]----------
-- GLPK for optimization: yes
-- Reading GraphML files: yes
-- Thread-local storage: yes
-- Link-time optimization: no
--
-- --------[ Dependencies ]--------
-- ARPACK: vendored
-- BISON: no
-- BLAS: yes
-- FLEX: no
-- GLPK: vendored
-- GMP: vendored
-- INFOMAP: vendored
-- LAPACK: yes
-- LibXml2: yes
-- OpenMP: no
-- PLFIT: vendored
--
-- -----------[ Testing ]----------
-- Diff tool: not found
-- Sanitizers: none
-- Code coverage: no
-- Verify 'finally' stack: no
--
-- --------[ Documentation ]-------
-- HTML: no
-- PDF: no
-- INFO: no
--
-- igraph configured successfully.
--
-- Configuring done (6.0s)
-- Generating done (0.3s)
-- Build files have been written to: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/_build
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366 | f = f; /* banish non-use warning */
| ~ ^ ~
1 warning generated.
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58 | if (len != f__buflen || !(nbuf = (char*)malloc(len)))
| ^~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/f2c/open.c:60:6: note: uninitialized use occurs here
60 | s = nbuf;
| ^~~~
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58 | if (len != f__buflen || !(nbuf = (char*)malloc(len)))
| ^~~~~~~~~~~~~~~~~~~
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51 | char *nbuf, *s, *t, *te;
| ^
| = NULL
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30 | waitpause(Sigarg)
| ^~~~~~~~~
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40 | s_1paus(FILE *fin)
| ^~~~~~~
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[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_log.c.o
[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/derfc_.c.o
[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/i_nint.c.o
[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_nint.c.o
[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_sin.c.o
[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/dfe.c.o
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[ 28%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/r_sign.c.o
[ 29%] Building C object vendor/f2c/CMakeFiles/f2c_vendored.dir/z_sqrt.c.o
[ 29%] Built target f2c_vendored
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_1.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_2.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_aat.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_control.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_defaults.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_info.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_order.c.o
[ 29%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_post_tree.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_postorder.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_preprocess.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/amd/amd_valid.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/advbas.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnhall.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnlp.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/asnokalg.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/ckasn.c.o
[ 30%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/ckcnf.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cplex.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cpp.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/cpxbas.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/graph.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/gridgen.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/intfeas1.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/maxffalg.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/maxflp.c.o
[ 31%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcflp.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcfokalg.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mcfrelax.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/minisat1.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mpl.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/mps.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1297:19: warning: explicitly assigning value of variable of type 'GLPAIJ *' (aka 'struct GLPAIJ *') to itself [-Wself-assign]
1297 | for (aij = aij; aij != NULL; aij = aij->c_next)
| ~~~ ^ ~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1341:22: warning: variable 'rhs' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
1341 | else if (type == GLP_DB || type == GLP_FX)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1346:14: note: uninitialized use occurs here
1346 | if (rhs != 0.0)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1341:18: note: remove the 'if' if its condition is always true
1341 | else if (type == GLP_DB || type == GLP_FX)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1342 | rhs = P->row[i]->lb;
| ~
1343 | else
| ~~~~
1344 | xassert(type != type);
| ~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/mps.c:1330:20: note: initialize the variable 'rhs' to silence this warning
1330 | double rhs;
| ^
| = 0.0
2 warnings generated.
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/netgen.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/npp.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/pript.c.o
[ 32%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prmip.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob1.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob2.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:230:10: warning: variable 'lb' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
230 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:233:14: note: uninitialized use occurs here
233 | return lb;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:219:16: note: initialize the variable 'lb' to silence this warning
219 | { double lb;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:263:10: warning: variable 'ub' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
263 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:266:14: note: uninitialized use occurs here
266 | return ub;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:252:16: note: initialize the variable 'ub' to silence this warning
252 | { double ub;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:324:10: warning: variable 'lb' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
324 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:327:14: note: uninitialized use occurs here
327 | return lb;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:312:16: note: initialize the variable 'lb' to silence this warning
312 | { double lb;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:358:10: warning: variable 'ub' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
358 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:361:14: note: uninitialized use occurs here
361 | return ub;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/api/prob2.c:346:16: note: initialize the variable 'ub' to silence this warning
346 | { double ub;
| ^
| = 0.0
4 warnings generated.
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob3.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob4.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prob5.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prrngs.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/prsol.c.o
[ 34%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdasn.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdcc.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdcnf.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdipt.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmaxf.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmcf.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdmip.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdprob.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rdsol.c.o
[ 35%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/rmfgen.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/strong.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/topsort.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wcliqex.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/weak.c.o
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[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrcc.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrcnf.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wript.c.o
[ 36%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrmaxf.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrmcf.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrmip.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrprob.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/api/wrsol.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/btf.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/btfint.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/fhv.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/fhvint.c.o
[ 37%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/ifu.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/luf.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/lufint.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/scf.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scf.c:504:10: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
504 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scf.c:507:11: note: uninitialized use occurs here
507 | if (ret != 0)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scf.c:474:17: note: initialize the variable 'ret' to silence this warning
474 | int k, ret;
| ^
| = 0
1 warning generated.
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/scfint.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:72:10: warning: variable 'n0_max' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
72 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:76:24: note: uninitialized use occurs here
76 | if (old_n0_max < n0_max)
| ^~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:46:37: note: initialize the variable 'n0_max' to silence this warning
46 | int nn_max, old_n0_max, n0_max, k, ret;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:72:10: warning: variable 'old_n0_max' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
72 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:76:11: note: uninitialized use occurs here
76 | if (old_n0_max < n0_max)
| ^~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:46:29: note: initialize the variable 'old_n0_max' to silence this warning
46 | int nn_max, old_n0_max, n0_max, k, ret;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:209:10: warning: variable 'norm' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
209 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:212:14: note: uninitialized use occurs here
212 | return norm;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/bflib/scfint.c:198:18: note: initialize the variable 'norm' to silence this warning
198 | double norm;
| ^
| = 0.0
3 warnings generated.
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/sgf.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/bflib/sva.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/colamd/colamd.c.o
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/bfd.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:270:17: warning: unused variable 'cond' [-Wunused-variable]
270 | double cond;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:248:10: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
248 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:268:11: note: uninitialized use occurs here
268 | if (ret == 0)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:143:20: note: initialize the variable 'ret' to silence this warning
143 | int type, ret;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:474:16: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
474 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:478:21: note: uninitialized use occurs here
478 | switch (ret)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/bfd.c:439:14: note: initialize the variable 'ret' to silence this warning
439 | int ret;
| ^
| = 0
3 warnings generated.
[ 38%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/bfx.c.o
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi06.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi06.c:565:26: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
565 | status = status;
| ~~~~~~ ^ ~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi06.c:574:20: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
574 | status = status;
| ~~~~~~ ^ ~~~~~~
2 warnings generated.
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi07.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:433:10: warning: variable 'pst' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
433 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:437:22: note: uninitialized use occurs here
437 | lp->pbs_stat = pst;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:262:29: note: initialize the variable 'pst' to silence this warning
262 | int i, j, k, type, pst, dst, ret, stat;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:433:10: warning: variable 'dst' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
433 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:438:22: note: uninitialized use occurs here
438 | lp->dbs_stat = dst;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi07.c:262:34: note: initialize the variable 'dst' to silence this warning
262 | int i, j, k, type, pst, dst, ret, stat;
| ^
| = 0
2 warnings generated.
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi08.c.o
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi09.c.o
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi10.c.o
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi12.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi12.c:1632:16: warning: variable 'dir' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
1632 | else if (type == GLP_UP)
| ^~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi12.c:1648:46: note: uninitialized use occurs here
1648 | piv = glp_dual_rtest(P, len, ind, val, dir, eps);
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi12.c:1632:12: note: remove the 'if' if its condition is always true
1632 | else if (type == GLP_UP)
| ^~~~~~~~~~~~~~~~~~~
1633 | { if (y <= rhs)
1634 | { /* the constraint is not violated */
1635 | ret = 1;
1636 | goto done;
1637 | }
1638 | /* in the adjacent basis y goes to its upper bound */
1639 | dir = -1;
1640 | }
|
1641 | else
| ~~~~
1642 | xerror("glp_analyze_row: type = %d; invalid parameter\n",
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1643 | type);
| ~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpapi12.c:1586:20: note: initialize the variable 'dir' to silence this warning
1586 | { int t, k, dir, piv, ret = 0;
| ^
| = 0
1 warning generated.
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpapi13.c.o
[ 40%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios01.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios01.c:224:17: warning: explicitly assigning value of variable of type 'IOSNPD *' (aka 'struct IOSNPD *') to itself [-Wself-assign]
224 | for (node = node; node != NULL; node = node->up)
| ~~~~ ^ ~~~~
1 warning generated.
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios02.c.o
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios03.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios03.c:80:16: warning: variable 'rho' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
80 | else if (T->mip->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios03.c:96:63: note: uninitialized use occurs here
96 | T->mip->it_cnt, bingo ? ">>>>>" : "mip =", best_mip, rho,
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios03.c:80:12: note: remove the 'if' if its condition is always true
80 | else if (T->mip->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
81 | rho = "<=";
| ~
82 | else
| ~~~~
83 | xassert(T != T);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios03.c:53:46: note: initialize the variable 'rho' to silence this warning
53 | char best_mip[50], best_bound[50], *rho, rel_gap[50];
| ^
| = NULL
1 warning generated.
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios07.c.o
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios09.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:68:16: warning: variable 'j' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
68 | else if (T->parm->br_tech == GLP_BR_PCH)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:74:14: note: uninitialized use occurs here
74 | return j;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:68:12: note: remove the 'if' if its condition is always true
68 | else if (T->parm->br_tech == GLP_BR_PCH)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
69 | { /* hybrid pseudocost heuristic */
70 | j = ios_pcost_branch(T, next);
71 | }
|
72 | else
| ~~~~
73 | xassert(T != T);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:51:12: note: initialize the variable 'j' to silence this warning
51 | { int j;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:456:22: warning: variable 'degrad' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
456 | else if (P->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:464:17: note: uninitialized use occurs here
464 | if (degrad < 1e-6 * (1.0 + 0.001 * fabs(P->obj_val)))
| ^~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:456:18: note: remove the 'if' if its condition is always true
456 | else if (P->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~
457 | degrad = P->obj_val - lp->obj_val;
| ~
458 | else
| ~~~~
459 | xassert(P != P);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:430:20: note: initialize the variable 'degrad' to silence this warning
430 | double degrad;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:560:16: warning: variable 'psi' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
560 | else if (brnch == GLP_UP_BRNCH)
| ^~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:577:14: note: uninitialized use occurs here
577 | done: return psi;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:560:12: note: remove the 'if' if its condition is always true
560 | else if (brnch == GLP_UP_BRNCH)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
561 | { /* up-branch */
562 | if (csa->up_cnt[j] == 0)
563 | { /* initialize up pseudocost */
564 | beta = T->mip->col[j]->prim;
565 | degrad = eval_degrad(T->mip, j, ceil(beta));
566 | if (degrad == DBL_MAX)
567 | { psi = DBL_MAX;
568 | goto done;
569 | }
570 | csa->up_cnt[j] = 1;
571 | csa->up_sum[j] = degrad / (ceil(beta) - beta);
572 | }
573 | psi = csa->up_sum[j] / (double)csa->up_cnt[j];
574 | }
|
575 | else
| ~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios09.c:542:31: note: initialize the variable 'psi' to silence this warning
542 | double beta, degrad, psi;
| ^
| = 0.0
3 warnings generated.
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios11.c.o
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpios12.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios12.c:66:16: warning: variable 'p' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
66 | else if (T->parm->bt_tech == GLP_BT_BPH)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios12.c:78:14: note: uninitialized use occurs here
78 | return p;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios12.c:66:12: note: remove the 'if' if its condition is always true
66 | else if (T->parm->bt_tech == GLP_BT_BPH)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
67 | { if (T->mip->mip_stat == GLP_UNDEF)
68 | { /* "most integer feasible" subproblem */
69 | p = most_feas(T);
70 | }
71 | else
72 | { /* best projection heuristic */
73 | p = best_proj(T);
74 | }
75 | }
|
76 | else
| ~~~~
77 | xassert(T != T);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpios12.c:51:12: note: initialize the variable 'p' to silence this warning
51 | { int p;
| ^
| = 0
1 warning generated.
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpipm.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpipm.c:1060:16: warning: variable 'dir' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
1060 | else if (P->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpipm.c:1064:14: note: uninitialized use occurs here
1064 | c[0] = dir * P->c0;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpipm.c:1060:12: note: remove the 'if' if its condition is always true
1060 | else if (P->dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~
1061 | dir = -1.0;
| ~
1062 | else
| ~~~~
1063 | xassert(P != P);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/draft/glpipm.c:1030:17: note: initialize the variable 'dir' to silence this warning
1030 | double dir, *A_val, *b, *c, *x, *y, *z;
| ^
| = 0.0
1 warning generated.
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpmat.c.o
[ 41%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpscl.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpssx01.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/glpssx02.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/draft/lux.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/alloc.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/dlsup.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/env.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/error.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/stdc.c.o
[ 42%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/stdout.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/stream.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/time.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/env/tls.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/cfg.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/cfg1.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/cfg2.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/clqcut.c.o
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/covgen.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/covgen.c:154:10: warning: variable 'rhs' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
154 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/covgen.c:160:12: note: uninitialized use occurs here
160 | *b = rhs / a1->val;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/covgen.c:108:17: note: initialize the variable 'rhs' to silence this warning
108 | double rhs;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/covgen.c:155:21: warning: variable 'type' is uninitialized when used here [-Wuninitialized]
155 | xassert(type != type);
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/env/env.h:175:16: note: expanded from macro 'xassert'
175 | ((void)((expr) || (glp_assert_(#expr, IGRAPH_FILE_BASENAME, __LINE__), 1)))
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/covgen.c:107:15: note: initialize the variable 'type' to silence this warning
107 | int type;
| ^
| = 0
2 warnings generated.
[ 43%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/fpump.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/gmicut.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/gmigen.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/mirgen.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/mirgen.c:987:19: warning: variable 'x' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
987 | else if (mir->subst[k] == 'U')
| ^~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/mirgen.c:1000:14: note: uninitialized use occurs here
1000 | if (x < -0.001)
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/mirgen.c:987:15: note: remove the 'if' if its condition is always true
987 | else if (mir->subst[k] == 'U')
| ^~~~~~~~~~~~~~~~~~~~~~~~~
988 | { xassert(mir->ub[k] != +DBL_MAX);
989 | kk = mir->vub[k];
990 | if (kk == 0)
991 | x = mir->ub[k] - mir->x[k];
992 | else
993 | x = mir->ub[k] * mir->x[kk] - mir->x[k];
994 | }
|
995 | else
| ~~~~
996 | xassert(k != k);
| ~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/intopt/mirgen.c:974:18: note: initialize the variable 'x' to silence this warning
974 | { double x;
| ^
| = 0.0
1 warning generated.
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/intopt/spv.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/minisat/minisat.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/avl.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/bignum.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/dimacs.c.o
[ 44%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/dmp.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/ffalg.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/fp2rat.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/fvs.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/gcd.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/hbm.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/jd.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/keller.c.o
[ 45%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/ks.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/misc/ks.c:428:14: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
428 | for (j = j; j <= n; j++)
| ~ ^ ~
1 warning generated.
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/mc13d.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/mc21a.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/mt1.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/mygmp.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/okalg.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/qmd.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/relax4.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/rgr.c.o
[ 47%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/rng.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/rng1.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/round2n.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/spm.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/str2int.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/str2num.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/strspx.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/strtrim.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/triang.c.o
[ 48%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/wclique.c.o
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/misc/wclique1.c.o
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl1.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1079:10: warning: variable 'code' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
1079 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1082:14: note: uninitialized use occurs here
1082 | return code;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:940:17: note: initialize the variable 'code' to silence this warning
940 | CODE *code;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1228:16: warning: variable 'op' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
1228 | else if (strcmp(mpl->image, "gmtime") == 0)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1240:11: note: uninitialized use occurs here
1240 | if (op == O_MIN || op == O_MAX)
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1228:12: note: remove the 'if' if its condition is always true
1228 | else if (strcmp(mpl->image, "gmtime") == 0)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1229 | op = O_GMTIME;
| ~
1230 | else
| ~~~~
1231 | error(mpl, "function %s unknown", mpl->image);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1174:13: note: initialize the variable 'op' to silence this warning
1174 | int op;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2022:10: warning: variable 'code' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
2022 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2028:15: note: uninitialized use occurs here
2028 | link_up(code);
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1941:17: note: initialize the variable 'code' to silence this warning
1941 | { CODE *code;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1959:16: warning: variable 'op' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
1959 | else if (strcmp(mpl->image, "setof") == 0)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1971:15: note: uninitialized use occurs here
1971 | switch (op)
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1959:12: note: remove the 'if' if its condition is always true
1959 | else if (strcmp(mpl->image, "setof") == 0)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1960 | op = O_SETOF;
| ~
1961 | else
| ~~~~
1962 | error(mpl, "operator %s unknown", mpl->image);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:1943:13: note: initialize the variable 'op' to silence this warning
1943 | int op;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2247:16: warning: variable 'code' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
2247 | else if (mpl->token == T_IF)
| ^~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2257:14: note: uninitialized use occurs here
2257 | return code;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2247:12: note: remove the 'if' if its condition is always true
2247 | else if (mpl->token == T_IF)
| ^~~~~~~~~~~~~~~~~~~~~~~
2248 | { /* parse conditional expression */
2249 | code = branched_expression(mpl);
2250 | }
|
2251 | else if (is_reserved(mpl))
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
2252 | { /* other reserved keywords cannot be used here */
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2253 | error(mpl, "invalid use of reserved keyword %s", mpl->image);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2254 | }
| ~
2255 | else
| ~~~~
2256 | error(mpl, "syntax error in expression");
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:2196:17: note: initialize the variable 'code' to silence this warning
2196 | { CODE *code;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:3849:16: warning: variable 'type' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
3849 | else if (is_keyword(mpl, "maximize"))
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl.h:365:20: note: expanded from macro 'is_keyword'
365 | #define is_keyword _glp_mpl_is_keyword
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:3873:19: note: uninitialized use occurs here
3873 | obj->type = type;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:3849:12: note: remove the 'if' if its condition is always true
3849 | else if (is_keyword(mpl, "maximize"))
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3850 | type = A_MAXIMIZE;
| ~
3851 | else
| ~~~~
3852 | xassert(mpl != mpl);
| ~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl1.c:3846:15: note: initialize the variable 'type' to silence this warning
3846 | int type;
| ^
| = 0
6 warnings generated.
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl2.c.o
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl3.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2383:16: warning: variable 'refer' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
2383 | else if (set->option != NULL)
| ^~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2393:14: note: uninitialized use occurs here
2393 | return refer;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2383:12: note: remove the 'if' if its condition is always true
2383 | else if (set->option != NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~
2384 | { /* compute default elemental set */
2385 | refer = eval_elemset(mpl, set->option);
2386 | goto add;
2387 | }
|
2388 | else
| ~~~~
2389 | { /* no value (elemental set) is provided */
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2390 | error(mpl, "no value for %s%s", set->name, format_tuple(mpl,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2391 | '[', tuple));
| ~~~~~~~~~~~~~
2392 | }
| ~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2367:21: note: initialize the variable 'refer' to silence this warning
2367 | ELEMSET *refer;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2714:16: warning: variable 'value' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
2714 | else if (par->defval != NULL)
| ^~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2727:14: note: uninitialized use occurs here
2727 | return value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2714:12: note: remove the 'if' if its condition is always true
2714 | else if (par->defval != NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~
2715 | { /* take default value provided in the data section */
2716 | if (par->defval->str != NULL)
2717 | error(mpl, "cannot convert %s to floating-point number",
2718 | format_symbol(mpl, par->defval));
2719 | value = par->defval->num;
2720 | goto add;
2721 | }
|
2722 | else
| ~~~~
2723 | { /* no value is provided */
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2724 | error(mpl, "no value for %s%s", par->name, format_tuple(mpl,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2725 | '[', tuple));
| ~~~~~~~~~~~~~
2726 | }
| ~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2693:19: note: initialize the variable 'value' to silence this warning
2693 | double value;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2952:16: warning: variable 'value' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
2952 | else if (par->defval != NULL)
| ^~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2962:14: note: uninitialized use occurs here
2962 | return value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2952:12: note: remove the 'if' if its condition is always true
2952 | else if (par->defval != NULL)
| ^~~~~~~~~~~~~~~~~~~~~~~~
2953 | { /* take default value provided in the data section */
2954 | value = copy_symbol(mpl, par->defval);
2955 | goto add;
2956 | }
|
2957 | else
| ~~~~
2958 | { /* no value is provided */
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2959 | error(mpl, "no value for %s%s", par->name, format_tuple(mpl,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2960 | '[', tuple));
| ~~~~~~~~~~~~~
2961 | }
| ~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:2931:20: note: initialize the variable 'value' to silence this warning
2931 | SYMBOL *value;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3898:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
3898 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3904:25: note: uninitialized use occurs here
3904 | code->value.num = value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3602:19: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
3602 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3904:25: note: uninitialized use occurs here
3904 | code->value.num = value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3562:19: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
3562 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3904:25: note: uninitialized use occurs here
3904 | code->value.num = value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3491:19: note: initialize the variable 'value' to silence this warning
3491 | { double value;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4024:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4024 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4030:42: note: uninitialized use occurs here
4030 | code->value.sym = copy_symbol(mpl, value);
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:3915:20: note: initialize the variable 'value' to silence this warning
3915 | { SYMBOL *value;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4275:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4275 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4281:25: note: uninitialized use occurs here
4281 | code->value.bit = value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4071:16: note: initialize the variable 'value' to silence this warning
4071 | { int value;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4323:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4323 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4329:43: note: uninitialized use occurs here
4329 | code->value.tuple = copy_tuple(mpl, value);
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4292:19: note: initialize the variable 'value' to silence this warning
4292 | { TUPLE *value;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4479:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4479 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4485:43: note: uninitialized use occurs here
4485 | code->value.set = copy_elemset(mpl, value);
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4376:21: note: initialize the variable 'value' to silence this warning
4376 | { ELEMSET *value;
| ^
| = NULL
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4619:15: warning: variable 'value' is used uninitialized whenever switch case is taken [-Wsometimes-uninitialized]
4619 | case O_SETOF:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl.h:2176:25: note: expanded from macro 'O_SETOF'
2176 | #define O_SETOF 384 /* compute elemental set */
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4640:14: note: uninitialized use occurs here
4640 | return value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4637:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4637 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4640:14: note: uninitialized use occurs here
4640 | return value;
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4506:16: note: initialize the variable 'value' to silence this warning
4506 | { int value;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4810:10: warning: variable 'value' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
4810 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4816:44: note: uninitialized use occurs here
4816 | code->value.form = copy_formula(mpl, value);
| ^~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl3.c:4701:21: note: initialize the variable 'value' to silence this warning
4701 | { FORMULA *value;
| ^
| = NULL
13 warnings generated.
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl4.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:919:10: warning: variable 'kind' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
919 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:922:14: note: uninitialized use occurs here
922 | return kind;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:906:15: note: initialize the variable 'kind' to silence this warning
906 | { int kind;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:1155:10: warning: variable 'kind' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
1155 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:1158:14: note: uninitialized use occurs here
1158 | return kind;
| ^~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl4.c:1142:15: note: initialize the variable 'kind' to silence this warning
1142 | { int kind;
| ^
| = 0
2 warnings generated.
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl5.c.o
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mpl6.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:687:17: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
687 | for (j = j; j < 11; j++)
| ~ ^ ~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:854:20: warning: explicitly assigning value of variable of type 'int' to itself [-Wself-assign]
854 | for (j = j; j < dbf->len[k]; j++)
| ~ ^ ~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:976:10: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
976 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:979:11: note: uninitialized use occurs here
979 | if (ret > 0)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:962:14: note: initialize the variable 'ret' to silence this warning
962 | int ret;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:1001:10: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
1001 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:1004:11: note: uninitialized use occurs here
1004 | if (ret)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:987:14: note: initialize the variable 'ret' to silence this warning
987 | int ret;
| ^
| = 0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:1026:10: warning: variable 'ret' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
1026 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:1031:11: note: uninitialized use occurs here
1031 | if (ret)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mpl6.c:1012:14: note: initialize the variable 'ret' to silence this warning
1012 | int ret;
| ^
| = 0
5 warnings generated.
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/mpl/mplsql.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mplsql.c:41:14: warning: unused function 'db_iodbc_open_int' [-Wunused-function]
41 | static void *db_iodbc_open_int(TABDCA *dca, int mode, const char
| ^~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/mpl/mplsql.c:43:14: warning: unused function 'db_mysql_open_int' [-Wunused-function]
43 | static void *db_mysql_open_int(TABDCA *dca, int mode, const char
| ^~~~~~~~~~~~~~~~~
2 warnings generated.
[ 49%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp1.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:367:16: warning: variable 'dir' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
367 | else if (npp->orig_dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:382:17: note: uninitialized use occurs here
382 | npp->c0 = dir * orig->c0;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:367:12: note: remove the 'if' if its condition is always true
367 | else if (npp->orig_dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
368 | dir = -1.0;
| ~
369 | else
| ~~~~
370 | xassert(npp != npp);
| ~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:359:17: note: initialize the variable 'dir' to silence this warning
359 | double dir;
| ^
| = 0.0
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:498:16: warning: variable 'dir' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
498 | else if (npp->orig_dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:502:33: note: uninitialized use occurs here
502 | glp_set_obj_coef(prob, 0, dir * npp->c0);
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:498:12: note: remove the 'if' if its condition is always true
498 | else if (npp->orig_dir == GLP_MAX)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
499 | dir = -1.0;
| ~
500 | else
| ~~~~
501 | xassert(npp != npp);
| ~~~~~~~~~~~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp1.c:491:17: note: initialize the variable 'dir' to silence this warning
491 | double dir, *val;
| ^
| = 0.0
2 warnings generated.
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp2.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp3.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp4.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp4.c:724:16: warning: variable 'ptr' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
724 | else if (which == 1)
| ^~~~~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp4.c:731:16: note: uninitialized use occurs here
731 | for (e = ptr; e != NULL; e = e->next)
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp4.c:724:12: note: remove the 'if' if its condition is always true
724 | else if (which == 1)
| ^~~~~~~~~~~~~~~
725 | { ptr = copy_form(npp, row, +1.0);
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/npp/npp4.c:715:23: note: initialize the variable 'ptr' to silence this warning
715 | { struct elem *ptr, *e, *i, *k;
| ^
| = NULL
1 warning generated.
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp5.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/npp/npp6.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/proxy/proxy.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/proxy/proxy.c:952:17: warning: variable 'tela' set but not used [-Wunused-but-set-variable]
952 | double val, tela, tlimit;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/proxy/proxy.c:952:23: warning: unused variable 'tlimit' [-Wunused-variable]
952 | double val, tela, tlimit;
| ^~~~~~
2 warnings generated.
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/proxy/proxy1.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxat.c.o
[ 50%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxchuzc.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxchuzr.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxlp.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxnt.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxprim.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprim.c:1078:10: warning: variable 'nnn' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
1078 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprim.c:1083:62: note: uninitialized use occurs here
1083 | csa->phase == 2 ? '*' : ' ', csa->it_cnt, obj, sum, nnn);
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprim.c:1021:14: note: initialize the variable 'nnn' to silence this warning
1021 | { int nnn, k;
| ^
| = 0
1 warning generated.
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spxprob.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprob.c:163:10: warning: variable 'dir' is used uninitialized whenever switch default is taken [-Wsometimes-uninitialized]
163 | default:
| ^~~~~~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprob.c:167:14: note: uninitialized use occurs here
167 | c[0] = dir * P->c0;
| ^~~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/glpk/simplex/spxprob.c:154:17: note: initialize the variable 'dir' to silence this warning
154 | double dir, delta;
| ^
| = 0.0
1 warning generated.
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spychuzc.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spychuzr.c.o
[ 51%] Building C object vendor/glpk/CMakeFiles/glpk_vendored.dir/simplex/spydual.c.o
[ 51%] Built target glpk_vendored
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/MetaMapEquation.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/MemMapEquation.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/InfoEdge.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/BiasedMapEquation.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/StateNetwork.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/iterators/InfomapIterator.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/InfomapBase.cpp.o
[ 51%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/core/InfoNode.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/io/Network.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/io/ClusterMap.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/io/ProgramInterface.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/io/Output.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/io/Config.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/utils/Log.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/utils/FileURI.cpp.o
[ 52%] Building CXX object vendor/infomap/CMakeFiles/infomap_vendored.dir/src/utils/FlowCalculator.cpp.o
[ 52%] Built target infomap_vendored
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dnaupd.c.o
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dnaup2.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaup2.c:220:13: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
220 | integer nbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaup2.c:237:10: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
237 | real tmvbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaup2.c:245:10: warning: variable 'tnaup2' set but not used [-Wunused-but-set-variable]
245 | real tnaup2=0;
| ^
3 warnings generated.
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dgetv0.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dgetv0.c:157:17: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
157 | integer jj, nbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dgetv0.c:162:13: warning: variable 'nopx' set but not used [-Wunused-but-set-variable]
162 | integer nopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dgetv0.c:172:10: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
172 | real tmvbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dgetv0.c:176:10: warning: variable 'tgetv0' set but not used [-Wunused-but-set-variable]
176 | real tgetv0=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dgetv0.c:183:10: warning: variable 'tmvopx' set but not used [-Wunused-but-set-variable]
183 | real tmvopx=0;
| ^
5 warnings generated.
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dvout.c.o
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/arscnd.c.o
[ 52%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dmout.c.o
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dnaitr.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:254:13: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
254 | integer nbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:262:13: warning: variable 'nopx' set but not used [-Wunused-but-set-variable]
262 | integer nopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:279:10: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
279 | real tmvbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:295:34: warning: variable 'nitref' set but not used [-Wunused-but-set-variable]
295 | integer logfil=6, ndigit=-3, nitref=0, mnaitr=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:296:10: warning: variable 'titref' set but not used [-Wunused-but-set-variable]
296 | real titref=0, tnaitr=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:296:20: warning: variable 'tnaitr' set but not used [-Wunused-but-set-variable]
296 | real titref=0, tnaitr=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:299:13: warning: variable 'nrorth' set but not used [-Wunused-but-set-variable]
299 | integer nrorth=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:301:13: warning: variable 'nrstrt' set but not used [-Wunused-but-set-variable]
301 | integer nrstrt=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:302:10: warning: variable 'tmvopx' set but not used [-Wunused-but-set-variable]
302 | real tmvopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:583:20: warning: variable 't2' is uninitialized when used here [-Wuninitialized]
583 | tmvopx += t3 - t2;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnaitr.c:251:20: note: initialize the variable 't2' to silence this warning
251 | real t0, t1, t2, t3, t4, t5;
| ^
| = 0.0
10 warnings generated.
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/ivout.c.o
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dnapps.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnapps.c:219:10: warning: variable 'tnapps' set but not used [-Wunused-but-set-variable]
219 | real tnapps=0;
| ^
1 warning generated.
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dnconv.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dnconv.c:99:10: warning: variable 'tnconv' set but not used [-Wunused-but-set-variable]
99 | real tnconv=0;
| ^
1 warning generated.
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dneigh.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dneigh.c:152:10: warning: variable 'tneigh' set but not used [-Wunused-but-set-variable]
152 | real tneigh=0;
| ^
1 warning generated.
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dlaqrb.c.o
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dngets.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dngets.c:133:10: warning: variable 'tngets' set but not used [-Wunused-but-set-variable]
133 | real tngets=0;
| ^
1 warning generated.
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsortc.c.o
[ 54%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dneupd.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dneupd.c:347:23: warning: variable 'wrr' set but not used [-Wunused-but-set-variable]
347 | integer irr, wri, wrr;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dneupd.c:355:13: warning: variable 'iwev' set but not used [-Wunused-but-set-variable]
355 | integer iwev;
| ^
2 warnings generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsaupd.c.o
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsaup2.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaup2.c:225:13: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
225 | integer nbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaup2.c:244:10: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
244 | real tmvbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaup2.c:251:10: warning: variable 'tsaup2' set but not used [-Wunused-but-set-variable]
251 | real tsaup2=0;
| ^
3 warnings generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsaitr.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:248:13: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
248 | integer nbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:253:13: warning: variable 'nopx' set but not used [-Wunused-but-set-variable]
253 | integer nopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:266:10: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
266 | real tmvbx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:281:24: warning: variable 'nitref' set but not used [-Wunused-but-set-variable]
281 | integer ndigit=-3, nitref=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:282:10: warning: variable 'titref' set but not used [-Wunused-but-set-variable]
282 | real titref=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:285:10: warning: variable 'tsaitr' set but not used [-Wunused-but-set-variable]
285 | real tsaitr=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:286:13: warning: variable 'nrorth' set but not used [-Wunused-but-set-variable]
286 | integer nrorth=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:288:13: warning: variable 'nrstrt' set but not used [-Wunused-but-set-variable]
288 | integer nrstrt=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:289:10: warning: variable 'tmvopx' set but not used [-Wunused-but-set-variable]
289 | real tmvopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:567:20: warning: variable 't2' is uninitialized when used here [-Wuninitialized]
567 | tmvopx += t3 - t2;
| ^~
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsaitr.c:245:20: note: initialize the variable 't2' to silence this warning
245 | real t0, t1, t2, t3, t4, t5;
| ^
| = 0.0
10 warnings generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsapps.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsapps.c:190:10: warning: variable 'tsapps' set but not used [-Wunused-but-set-variable]
190 | real tsapps=0;
| ^
1 warning generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsconv.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsconv.c:93:10: warning: variable 'tsconv' set but not used [-Wunused-but-set-variable]
93 | real tsconv=0;
| ^
1 warning generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dseigt.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dseigt.c:122:10: warning: variable 'tseigt' set but not used [-Wunused-but-set-variable]
122 | real tseigt=0;
| ^
1 warning generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dstqrb.c.o
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsgets.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dsgets.c:130:10: warning: variable 'tsgets' set but not used [-Wunused-but-set-variable]
130 | real tsgets=0;
| ^
1 warning generated.
[ 55%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsortr.c.o
[ 56%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dstats.c.o
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:24:13: warning: variable 'nbx' set but not used [-Wunused-but-set-variable]
24 | integer nbx=0, nopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:24:20: warning: variable 'nopx' set but not used [-Wunused-but-set-variable]
24 | integer nbx=0, nopx=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:25:10: warning: variable 'trvec' set but not used [-Wunused-but-set-variable]
25 | real trvec=0, tmvbx=0, tgetv0=0, tsaup2=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:25:19: warning: variable 'tmvbx' set but not used [-Wunused-but-set-variable]
25 | real trvec=0, tmvbx=0, tgetv0=0, tsaup2=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:25:28: warning: variable 'tgetv0' set but not used [-Wunused-but-set-variable]
25 | real trvec=0, tmvbx=0, tgetv0=0, tsaup2=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:25:38: warning: variable 'tsaup2' set but not used [-Wunused-but-set-variable]
25 | real trvec=0, tmvbx=0, tgetv0=0, tsaup2=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:26:13: warning: variable 'nitref' set but not used [-Wunused-but-set-variable]
26 | integer nitref=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:10: warning: variable 'titref' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:20: warning: variable 'tseigt' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:30: warning: variable 'tsaupd' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:40: warning: variable 'tsaitr' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:50: warning: variable 'tsgets' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:27:60: warning: variable 'tsapps' set but not used [-Wunused-but-set-variable]
27 | real titref=0, tseigt=0, tsaupd=0, tsaitr=0, tsgets=0, tsapps=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:28:13: warning: variable 'nrorth' set but not used [-Wunused-but-set-variable]
28 | integer nrorth=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:29:10: warning: variable 'tsconv' set but not used [-Wunused-but-set-variable]
29 | real tsconv=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:30:13: warning: variable 'nrstrt' set but not used [-Wunused-but-set-variable]
30 | integer nrstrt=0;
| ^
/Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/igraph/vendor/lapack/dstats.c:31:10: warning: variable 'tmvopx' set but not used [-Wunused-but-set-variable]
31 | real tmvopx=0;
| ^
17 warnings generated.
[ 56%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dseupd.c.o
[ 56%] Building C object vendor/lapack/CMakeFiles/arpack_vendored.dir/dsesrt.c.o
[ 56%] Built target arpack_vendored
[ 57%] Building C object vendor/mini-gmp/CMakeFiles/gmp_vendored.dir/mini-gmp.c.o
[ 57%] Built target gmp_vendored
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-advance-64.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-advance-128.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-output-32.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-output-64.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-output-128.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-rngs-64.c.o
[ 58%] Building C object vendor/pcg/CMakeFiles/pcg.dir/pcg-rngs-128.c.o
[ 58%] Built target pcg
[ 58%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/gss.c.o
[ 58%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/hzeta.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/kolmogorov.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/lbfgs.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/mt.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/options.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/plfit.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/plfit_error.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/rbinom.c.o
[ 60%] Building C object vendor/plfit/CMakeFiles/plfit_vendored.dir/sampling.c.o
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[ 60%] Building C object vendor/qhull/CMakeFiles/qhull_vendored.dir/libqhull_r/accessors_r.c.o
[ 61%] Building C object vendor/qhull/CMakeFiles/qhull_vendored.dir/libqhull_r/geom_r.c.o
[ 61%] Building C object vendor/qhull/CMakeFiles/qhull_vendored.dir/libqhull_r/geom2_r.c.o
[ 61%] Building C object vendor/qhull/CMakeFiles/qhull_vendored.dir/libqhull_r/global_r.c.o
[ 61%] Building C object vendor/qhull/CMakeFiles/qhull_vendored.dir/libqhull_r/io_r.c.o
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[100%] Linking CXX static library libigraph.a
[100%] Built target igraph
-- Install configuration: "Release"
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/libigraph.a
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_conversion.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_attributes.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_coloring.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_bitset.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_decls.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_eulerian.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_centrality.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_vector_type.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_paths.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_stack.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_scan.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_separators.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_vector_ptr.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_datatype.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_iterators.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_eigen.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_bitset_list.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_foreign.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_strvector.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_hrg.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_embedding.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_neighborhood.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_bipartite.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_nongraph.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_interrupt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_complex.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_cycles.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_isomorphism.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_matching.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_heap.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_matrix.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_qsort.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_constants.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_interface.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_cocitation.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_progress.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_reachability.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_flow.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_error.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_psumtree.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_sparsemat.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_layout.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_games.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_spatial.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_setup.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_pmt_off.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_vector_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_constructors.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_statusbar.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_cohesive_blocks.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_blas.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_vector_list.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_sampling.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_arpack.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_matrix_list.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_matrix_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_stack_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_types.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_typed_list_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_memory.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_epidemics.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_operators.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_adjlist.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_dqueue.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_mixing.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_visitor.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_graph_list.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_motifs.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_heap_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_graphlets.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_cliques.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_vector.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_graphicality.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_components.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_lsap.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_random.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_structural.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_lapack.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_dqueue_pmt.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_community.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_transitivity.h
-- Up-to-date: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_export.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_config.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_version.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/include/igraph/igraph_threading.h
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/pkgconfig/igraph.pc
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/cmake/igraph/igraph-config.cmake
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/cmake/igraph/igraph-config-version.cmake
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/cmake/igraph/igraph-targets.cmake
-- Installing: /Users/biocbuild/bbs-3.23-bioc/meat/Rigraphlib/inst/igraph/lib/cmake/igraph/igraph-targets-release.cmake
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rigraphlib)
