| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-09 11:34 -0400 (Mon, 09 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4508 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-02-28 r89501) -- "Unsuffered Consequences" | 3381 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1478/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| NPARC 1.23.0 (landing page) Nils Kurzawa
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| See other builds for NPARC in R Universe. | ||||||||||||||
|
To the developers/maintainers of the NPARC package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/NPARC.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: NPARC |
| Version: 1.23.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data NPARC |
| StartedAt: 2026-03-08 16:02:33 -0400 (Sun, 08 Mar 2026) |
| EndedAt: 2026-03-08 16:03:47 -0400 (Sun, 08 Mar 2026) |
| EllapsedTime: 74.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data NPARC
###
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* checking for file ‘NPARC/DESCRIPTION’ ... OK
* preparing ‘NPARC’:
* checking DESCRIPTION meta-information ... OK
* installing the package (it is needed to build vignettes)
* creating vignettes ... ERROR
--- re-building ‘NPARC.Rmd’ using rmarkdown
2026-03-08 16:02:37.295 R[54410:117782656] XType: Using static font registry.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plot_stk4-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/add_null_resids_stk4-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plot_Fig_2_A_B-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plot_stk4_results-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plotFiid-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plotPiid-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plotFnew-1.png" but not available.
The magick package is required to crop "/private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpDNbKti/Rbuildd3c327bc5e83/NPARC/vignettes/NPARC_files/figure-html/plotPnew-1.png" but not available.
Quitting from NPARC.Rmd:411-413 [session]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'devtools'
---
Backtrace:
▆
1. └─base::loadNamespace(x)
2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
3. └─base (local) withOneRestart(expr, restarts[[1L]])
4. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'NPARC.Rmd' failed with diagnostics:
there is no package called 'devtools'
--- failed re-building ‘NPARC.Rmd’
SUMMARY: processing the following file failed:
‘NPARC.Rmd’
Error: Vignette re-building failed.
Execution halted