Sean Davis
| Snapshot Date: 2026-03-08 13:40 -0400 (Sun, 08 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/GEOquery |
| git_branch: devel |
| git_last_commit: ccaa9cd |
| git_last_commit_date: 2025-11-24 17:27:25 -0400 (Mon, 24 Nov 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-09 11:34 -0400 (Mon, 09 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4508 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-02-28 r89501) -- "Unsuffered Consequences" | 3381 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 869/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GEOquery 2.79.0 (landing page) Sean Davis
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| See other builds for GEOquery in R Universe. | ||||||||||||||
|
To the developers/maintainers of the GEOquery package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GEOquery.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: GEOquery |
| Version: 2.79.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL GEOquery |
| StartedAt: 2026-03-08 15:14:17 -0400 (Sun, 08 Mar 2026) |
| EndedAt: 2026-03-08 15:14:17 -0400 (Sun, 08 Mar 2026) |
| EllapsedTime: 0.6 seconds |
| RetCode: 1 |
| Status: ERROR |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL GEOquery
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library’
ERROR: dependency ‘data.table’ is not available for package ‘GEOquery’
Perhaps try a variation of:
install.packages('data.table')
* removing ‘/Library/Frameworks/R.framework/Versions/4.6-arm64/Resources/library/GEOquery’