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This page was generated on 2025-04-04 12:34 -0400 (Fri, 04 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 27/217HostnameOS / ArchINSTALLBUILDCHECK
BiocBaseUtils 1.9.0  (landing page)
Marcel Ramos
Snapshot Date: 2025-04-04 12:00 -0400 (Fri, 04 Apr 2025)
git_url: https://git.bioconductor.org/packages/BiocBaseUtils
git_branch: devel
git_last_commit: d643df4
git_last_commit_date: 2024-10-29 11:11:51 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    ERROR  

CHECK results for BiocBaseUtils on teran2

To the developers/maintainers of the BiocBaseUtils package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: BiocBaseUtils
Version: 1.9.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD check --install=check:BiocBaseUtils.install-out.txt --library=/home/rapidbuild/bbs-3.21-bioc-rapid/R/site-library --timings BiocBaseUtils_1.9.0.tar.gz
StartedAt: 2025-04-04 12:29:40 -0400 (Fri, 04 Apr 2025)
EndedAt: 2025-04-04 12:29:43 -0400 (Fri, 04 Apr 2025)
EllapsedTime: 3.6 seconds
RetCode: 1
Status:   ERROR  
CheckDir: BiocBaseUtils.Rcheck
Warnings: NA

Command output

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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD check --install=check:BiocBaseUtils.install-out.txt --library=/home/rapidbuild/bbs-3.21-bioc-rapid/R/site-library --timings BiocBaseUtils_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/BiocBaseUtils.Rcheck’
* using R Under development (unstable) (2025-01-20 r87609)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘BiocBaseUtils/DESCRIPTION’ ... OK
* this is package ‘BiocBaseUtils’ version ‘1.9.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://bioconductor.org/packages/3.20/bioc/src/contrib:
  download from 'https://bioconductor.org/packages/3.20/bioc/src/contrib/PACKAGES' failed
Warning: unable to access index for repository https://bioconductor.org/packages/3.20/data/experiment/src/contrib:
  download from 'https://bioconductor.org/packages/3.20/data/experiment/src/contrib/PACKAGES' failed
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Error: inferior call failed
Execution halted

Installation output


Tests output


Example timings