| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-03-26 11:44 -0400 (Wed, 26 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences" | 4783 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" | 4552 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4581 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4533 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4463 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 2016/2315 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| snpStats 1.57.0 (landing page) David Clayton
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | ERROR | skipped | ||||||||||
|
To the developers/maintainers of the snpStats package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/snpStats.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: snpStats |
| Version: 1.57.0 |
| Command: chmod a+r snpStats -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data snpStats |
| StartedAt: 2025-03-25 22:06:42 -0400 (Tue, 25 Mar 2025) |
| EndedAt: 2025-03-25 22:08:12 -0400 (Tue, 25 Mar 2025) |
| EllapsedTime: 90.8 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r snpStats -R && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data snpStats ### ############################################################################## ############################################################################## * checking for file 'snpStats/DESCRIPTION' ... OK * preparing 'snpStats': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to process help pages * saving partial Rd database * creating vignettes ... ERROR --- re-building 'Fst-vignette.Rnw' using Sweave Loading required package: snpStats Loading required package: survival Loading required package: Matrix texify: major issue: User/administrator updates are out-of-sync. --- finished re-building 'Fst-vignette.Rnw' --- re-building 'data-input-vignette.Rnw' using Sweave texify: major issue: User/administrator updates are out-of-sync. --- finished re-building 'data-input-vignette.Rnw' --- re-building 'differences.Rnw' using Sweave texify: major issue: User/administrator updates are out-of-sync. --- finished re-building 'differences.Rnw' --- re-building 'imputation-vignette.Rnw' using Sweave texify: major issue: User/administrator updates are out-of-sync. --- finished re-building 'imputation-vignette.Rnw' --- re-building 'ld-vignette.Rnw' using Sweave