Nick Borcherding
| Snapshot Date: 2025-03-25 13:40 -0400 (Tue, 25 Mar 2025) |
| git_url: https://git.bioconductor.org/packages/immApex |
| git_branch: devel |
| git_last_commit: acc7661 |
| git_last_commit_date: 2025-03-25 06:31:30 -0400 (Tue, 25 Mar 2025) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-03-26 11:43 -0400 (Wed, 26 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences" | 4783 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" | 4552 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4581 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4533 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4463 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1029/2315 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| immApex 1.1.0 (landing page) Nick Borcherding
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | OK | ERROR | |||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | ERROR | OK | ERROR | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | OK | ERROR | OK | |||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | ERROR | OK | ERROR | ||||||||||
|
To the developers/maintainers of the immApex package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/immApex.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: immApex |
| Version: 1.1.0 |
| Command: E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:immApex.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings immApex_1.1.0.tar.gz |
| StartedAt: 2025-03-26 02:36:59 -0400 (Wed, 26 Mar 2025) |
| EndedAt: 2025-03-26 02:37:06 -0400 (Wed, 26 Mar 2025) |
| EllapsedTime: 6.8 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: immApex.Rcheck |
| Warnings: NA |
##############################################################################
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###
### Running command:
###
### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:immApex.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings immApex_1.1.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/immApex.Rcheck'
* using R Under development (unstable) (2025-03-01 r87860 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'immApex/DESCRIPTION' ... OK
* this is package 'immApex' version '1.1.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'immApex' can be installed ... ERROR
Installation failed.
See 'E:/biocbuild/bbs-3.21-bioc/meat/immApex.Rcheck/00install.out' for details.
* DONE
Status: 1 ERROR
See
'E:/biocbuild/bbs-3.21-bioc/meat/immApex.Rcheck/00check.log'
for details.
immApex.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL immApex ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'immApex' ... ** this is package 'immApex' version '1.1.0' ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 14.2.0' C:\rtools45\x86_64-w64-mingw32.static.posix\bin\nm.exe: RcppExports.o: file format not recognized C:\rtools45\x86_64-w64-mingw32.static.posix\bin\nm.exe: symdel_network.o: file format not recognized g++ -std=gnu++17 -shared -s -static-libgcc -o immApex.dll tmp.def RcppExports.o symdel_network.o -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR RcppExports.o: file not recognized: file format not recognized collect2.exe: error: ld returned 1 exit status no DLL was created ERROR: compilation failed for package 'immApex' * removing 'E:/biocbuild/bbs-3.21-bioc/R/library/immApex' * restoring previous 'E:/biocbuild/bbs-3.21-bioc/R/library/immApex'