IFC Development Team
| Snapshot Date: 2025-03-24 13:40 -0400 (Mon, 24 Mar 2025) |
| git_url: https://git.bioconductor.org/packages/genArise |
| git_branch: devel |
| git_last_commit: 26bc1fd |
| git_last_commit_date: 2024-10-29 09:23:25 -0400 (Tue, 29 Oct 2024) |
| Back to Multiple platform build/check report for BioC 3.21: simplified long |
|
This page was generated on 2025-03-25 11:47 -0400 (Tue, 25 Mar 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-03-13 r87965) -- "Unsuffered Consequences" | 4782 |
| palomino7 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2025-03-01 r87860 ucrt) -- "Unsuffered Consequences" | 4552 |
| lconway | macOS 12.7.1 Monterey | x86_64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4581 |
| kjohnson3 | macOS 13.7.1 Ventura | arm64 | R Under development (unstable) (2025-03-02 r87868) -- "Unsuffered Consequences" | 4533 |
| kunpeng2 | Linux (openEuler 24.03 LTS) | aarch64 | R Under development (unstable) (2025-02-19 r87757) -- "Unsuffered Consequences" | 4463 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 795/2315 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| genArise 1.83.0 (landing page) IFC Development Team
| nebbiolo1 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.7.1 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 24.03 LTS) / aarch64 | OK | OK | WARNINGS | ||||||||||
|
To the developers/maintainers of the genArise package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/genArise.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: genArise |
| Version: 1.83.0 |
| Command: /home/biocbuild/R/R/bin/R CMD INSTALL genArise |
| StartedAt: 2025-03-24 19:19:00 -0000 (Mon, 24 Mar 2025) |
| EndedAt: 2025-03-24 19:19:32 -0000 (Mon, 24 Mar 2025) |
| EllapsedTime: 32.1 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL genArise ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-devel_2025-02-19/site-library’ * installing *source* package ‘genArise’ ... ** this is package ‘genArise’ version ‘1.83.0’ ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading Warning messages: 1: no DISPLAY variable so Tk is not available 2: loading Rplot failed Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) Note: possible error in 'pdf(paste(name, "OriginalCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "OriginalRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "OriginalMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "OriginalCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "OriginalRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "OriginalMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "CorrectedMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NormalMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "FilterMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesCy3vsCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesRvsI.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "NoDuplicatesMvsA.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(name, horiz = F, ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, ".pdf", ': unused argument (horiz = FALSE) Note: possible error in 'pdf(paste(name, "R&G.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "BgCy5.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "BgCy3.pdf", ': unused argument (horiz = F) Note: possible error in 'pdf(paste(name, "Swap.pdf", ': unused argument (horiz = F) ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: no DISPLAY variable so Tk is not available Warning: loading Rplot failed ** testing if installed package can be loaded from final location Warning: no DISPLAY variable so Tk is not available Warning: loading Rplot failed ** testing if installed package keeps a record of temporary installation path * DONE (genArise)