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### Running command:
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###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:NuPoP.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings NuPoP_2.15.0.tar.gz
###
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* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/NuPoP.Rcheck'
* using R Under development (unstable) (2025-03-01 r87860 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'NuPoP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'NuPoP' version '2.15.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'NuPoP' can be installed ... OK
* used Fortran compiler: 'GNU Fortran (GCC) 14.2.0'
* checking installed package size ... INFO
  installed size is  6.0Mb
  sub-directories of 1Mb or more:
    R         3.2Mb
    extdata   2.2Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... NOTE
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
              old_size new_size compress
  sysdata.rda    4.6Mb    2.9Mb       xz
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
* checking usage of KIND in Fortran files ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  'E:/biocbuild/bbs-3.21-bioc/meat/NuPoP.Rcheck/00check.log'
for details.

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### Running command:
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###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL NuPoP
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* installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library'
* installing *source* package 'NuPoP' ...
** this is package 'NuPoP' version '2.15.0'
** using staged installation
** libs
using Fortran compiler: 'GNU Fortran (GCC) 14.2.0'
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c  cvtbfb.f90 -o cvtbfb.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c  cvtbfbNL4.f90 -o cvtbfbNL4.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c  vtbfb.f90 -o vtbfb.o
gfortran      -O2  -mfpmath=sse -msse2 -mstackrealign  -c  vtbfbNL4.f90 -o vtbfbNL4.o
gcc -shared -s -static-libgcc -o NuPoP.dll tmp.def cvtbfb.o cvtbfbNL4.o vtbfb.o vtbfbNL4.o -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -lgfortran -lquadmath -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR
installing to E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-NuPoP/00new/NuPoP/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (NuPoP)