| Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2025-01-20 12:17 -0500 (Mon, 20 Jan 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4746 |
| palomino8 | Windows Server 2022 Datacenter | x64 | 4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" | 4493 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1601/2289 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| pRoloc 1.46.0 (landing page) Laurent Gatto
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino8 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
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To the developers/maintainers of the pRoloc package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pRoloc.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: pRoloc |
| Version: 1.46.0 |
| Command: chmod a+r pRoloc -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data pRoloc |
| StartedAt: 2025-01-19 19:49:59 -0500 (Sun, 19 Jan 2025) |
| EndedAt: 2025-01-19 19:57:32 -0500 (Sun, 19 Jan 2025) |
| EllapsedTime: 453.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r pRoloc -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data pRoloc ### ############################################################################## ############################################################################## * checking for file 'pRoloc/DESCRIPTION' ... OK * preparing 'pRoloc': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'v01-pRoloc-tutorial.Rmd' using rmarkdown --- finished re-building 'v01-pRoloc-tutorial.Rmd' --- re-building 'v02-pRoloc-ml.Rmd' using rmarkdown --- finished re-building 'v02-pRoloc-ml.Rmd' --- re-building 'v03-pRoloc-bayesian.Rmd' using rmarkdown --- finished re-building 'v03-pRoloc-bayesian.Rmd' --- re-building 'v04-pRoloc-goannotations.Rmd' using rmarkdown Quitting from lines 117-119 [queryparams] (v04-pRoloc-goannotations.Rmd) Error: processing vignette 'v04-pRoloc-goannotations.Rmd' failed with diagnostics: Failed to parse URL: Bad scheme --- failed re-building 'v04-pRoloc-goannotations.Rmd' --- re-building 'v05-pRoloc-transfer-learning.Rmd' using rmarkdown Quitting from lines 143-147 [ap] (v05-pRoloc-transfer-learning.Rmd) Error: processing vignette 'v05-pRoloc-transfer-learning.Rmd' failed with diagnostics: Failed to parse URL: Bad scheme --- failed re-building 'v05-pRoloc-transfer-learning.Rmd' SUMMARY: processing the following files failed: 'v04-pRoloc-goannotations.Rmd' 'v05-pRoloc-transfer-learning.Rmd' Error: Vignette re-building failed. Execution halted