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BioC 3.2: INSTALL report for pRoloc on moscato1

This page was generated on 2016-04-23 10:18:56 -0700 (Sat, 23 Apr 2016).

Package 801/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pRoloc 1.10.3
Laurent Gatto
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/pRoloc
Last Changed Rev: 115613 / Revision: 116712
Last Changed Date: 2016-04-01 06:24:39 -0700 (Fri, 01 Apr 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: pRoloc
Version: 1.10.3
Command: rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/pRoloc_1.10.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=pRoloc.buildbin-libdir --merge-multiarch pRoloc_1.10.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.10.3.zip && rm pRoloc_1.10.3.tar.gz pRoloc_1.10.3.zip
StartedAt: 2016-04-22 18:47:37 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 18:49:08 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 91.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/pRoloc_1.10.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=pRoloc.buildbin-libdir --merge-multiarch pRoloc_1.10.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.10.3.zip  && rm pRoloc_1.10.3.tar.gz pRoloc_1.10.3.zip
###
##############################################################################
##############################################################################


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100 2065k  100 2065k    0     0  5403k      0 --:--:-- --:--:-- --:--:-- 5435k

install for i386

* installing *source* package 'pRoloc' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/RcppArmadillo/include" -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c pRoloc.cpp -o pRoloc.o
g++ -m32 -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lRlapack -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lRblas -lgfortran -Ld:/RCompile/r-compiling/local/local323/lib/i386 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'pRoloc'
Warning: replacing previous import 'ggplot2::alpha' by 'kernlab::alpha' when loading 'pRoloc'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'pRoloc'
Warning: replacing previous import 'ggplot2::alpha' by 'kernlab::alpha' when loading 'pRoloc'

install for x64

* installing *source* package 'pRoloc' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG    -I"D:/biocbld/bbs-3.2-bioc/R/library/Rcpp/include" -I"D:/biocbld/bbs-3.2-bioc/R/library/RcppArmadillo/include" -I"d:/RCompile/r-compiling/local/local323/include"     -O2 -Wall  -mtune=core2 -c pRoloc.cpp -o pRoloc.o
g++ -m64 -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lRlapack -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lRblas -lgfortran -Ld:/RCompile/r-compiling/local/local323/lib/x64 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import 'ggplot2::Position' by 'BiocGenerics::Position' when loading 'pRoloc'
Warning: replacing previous import 'ggplot2::alpha' by 'kernlab::alpha' when loading 'pRoloc'
* MD5 sums
packaged installation of 'pRoloc' as pRoloc_1.10.3.zip
* DONE (pRoloc)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'pRoloc' successfully unpacked and MD5 sums checked