mgsa 1.18.0
Sebastian Bauer
| Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/mgsa | | Last Changed Rev: 109589 / Revision: 116712 | | Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | [ OK ] | OK | WARNINGS | OK | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | WARNINGS | OK | |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf mgsa.buildbin-libdir && mkdir mgsa.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/mgsa_1.18.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=mgsa.buildbin-libdir --merge-multiarch mgsa_1.18.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL mgsa_1.18.0.zip && rm mgsa_1.18.0.tar.gz mgsa_1.18.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 217k 100 217k 0 0 9.9M 0 --:--:-- --:--:-- --:--:-- 13.2M
install for i386
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
gcc -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
gcc -m32 -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -Ld:/RCompile/r-compiling/local/local323/lib/i386 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'plot' from package 'graphics' in package 'mgsa'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'mgsa' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
gcc -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c mgsa.c -o mgsa.o
mgsa.c: In function 'ts_R_alloc':
mgsa.c:57:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
mgsa.c: In function 'mgsa_mcmc':
mgsa.c:1492:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
mgsa.c:1498:0: warning: ignoring #pragma omp critical [-Wunknown-pragmas]
gcc -m64 -shared -s -static-libgcc -o mgsa.dll tmp.def mgsa.o -Ld:/RCompile/r-compiling/local/local323/lib/x64 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/mgsa.buildbin-libdir/mgsa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mgsa' as mgsa_1.18.0.zip
* DONE (mgsa)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'mgsa' successfully unpacked and MD5 sums checked