flowClust 3.8.0
Greg Finak , Mike Jiang
| Snapshot Date: 2015-11-09 16:24:09 -0800 (Mon, 09 Nov 2015) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/flowClust | | Last Changed Rev: 109589 / Revision: 110496 | | Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | OK | |  |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | [ OK ] | OK | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings flowClust_3.8.0.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck’
* using R version 3.2.2 Patched (2015-10-08 r69496)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘flowClust/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘flowClust’ version ‘3.8.0’
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Depends: includes the non-default packages:
‘Biobase’ ‘graph’ ‘RBGL’ ‘ellipse’ ‘flowViz’ ‘mnormt’ ‘corpcor’
‘flowCore’ ‘clue’
Adding so many packages to the search path is excessive and importing
selectively is preferable.
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘flowClust’ can be installed ... [89s/94s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
‘corpcor’ ‘ellipse’ ‘flowViz’ ‘mnormt’ ‘RBGL’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Unexported object imported by a ':::' call: ‘flowViz:::fplot’
See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.estimateHyperParameters: no visible global function definition for
‘cov.shrink’
flowClust: no visible global function definition for ‘detectCores’
flowClust: no visible global function definition for ‘mclapply’
plotPrior: no visible global function definition for ‘ellipse’
SimulateMixture: no visible global function definition for ‘rmt’
%in%,flowFrame-tmixFilter: no visible global function definition for
‘parameters’
mkPrior,missing-flowFrame-missing-missing : .local: no visible global
function definition for ‘cov.shrink’
mkPrior,polygonGate-flowFrame-missing-missing : .local: no visible
global function definition for ‘parameters’
mkPrior,polygonGate-flowFrame-numeric-matrix : .local: no visible
global function definition for ‘parameters’
mkPrior,rectangleGate-flowFrame-missing-missing : .local: no visible
global function definition for ‘parameters’
mkPrior,rectangleGate-flowFrame-numeric-matrix : .local: no visible
global function definition for ‘parameters’
show,tmixFilter: no visible global function definition for ‘parameters’
summarizeFilter,tmixFilterResult-tmixFilter: no visible global function
definition for ‘parameters’
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [8s/9s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 4 NOTEs
See
‘/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00check.log’
for details.
* installing *source* package ‘flowClust’ ...
configure: Using bundled GSL.
configure: Searching for the compilers specified by R.
checking for gcc... llvm-gcc-4.2 -arch x86_64 -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether llvm-gcc-4.2 -arch x86_64 -std=gnu99 accepts -g... yes
checking for llvm-gcc-4.2 -arch x86_64 -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... llvm-gcc-4.2 -arch x86_64 -std=gnu99 -E
untarring gsl...
configure: Preparing to compile GSL.
configure: Configuring bundled GSL.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... ./install-sh -c -d
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether make sets $(MAKE)... (cached) yes
checking build system type... i386-apple-darwin10.8.0
checking host system type... i386-apple-darwin10.8.0
checking for gcc... llvm-gcc-4.2 -arch x86_64 -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether llvm-gcc-4.2 -arch x86_64 -std=gnu99 accepts -g... yes
checking for llvm-gcc-4.2 -arch x86_64 -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... llvm-gcc-4.2 -arch x86_64 -std=gnu99 -E
checking whether ln -s works... yes
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by llvm-gcc-4.2 -arch x86_64 -std=gnu99... /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin10/4.2.1/ld
checking if the linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin10/4.2.1/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... rm: conftest.dSYM: is a directory
BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin10/4.2.1/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for ar... ar
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from llvm-gcc-4.2 -arch x86_64 -std=gnu99 object... rm: conftest.dSYM: is a directory
ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if llvm-gcc-4.2 -arch x86_64 -std=gnu99 supports -fno-rtti -fno-exceptions... no
checking for llvm-gcc-4.2 -arch x86_64 -std=gnu99 option to produce PIC... -fno-common -DPIC
checking if llvm-gcc-4.2 -arch x86_64 -std=gnu99 PIC flag -fno-common -DPIC works... yes
checking if llvm-gcc-4.2 -arch x86_64 -std=gnu99 static flag -static works... no
checking if llvm-gcc-4.2 -arch x86_64 -std=gnu99 supports -c -o file.o... yes
checking if llvm-gcc-4.2 -arch x86_64 -std=gnu99 supports -c -o file.o... (cached) yes
checking whether the llvm-gcc-4.2 -arch x86_64 -std=gnu99 linker (/usr/llvm-gcc-4.2/libexec/gcc/i686-apple-darwin10/4.2.1/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin10.8.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for size_t... yes
checking for working volatile... yes
checking for inline... inline
checking whether char is unsigned... no
checking for GNU-style extern inline... no
checking for C99-style inline... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking for vprintf... yes
checking for _doprnt... no
checking for memcpy... yes
checking for memmove... yes
checking for strdup... yes
checking for strtol... yes
checking for strtoul... yes
checking for EXIT_SUCCESS and EXIT_FAILURE... yes
checking for cos in -lm... yes
checking whether feenableexcept is declared... no
checking whether fesettrapenable is declared... no
checking whether hypot is declared... yes
checking whether expm1 is declared... yes
checking whether acosh is declared... yes
checking whether asinh is declared... yes
checking whether atanh is declared... yes
checking whether ldexp is declared... yes
checking whether frexp is declared... yes
checking whether isinf is declared... yes
checking whether isfinite is declared... yes
checking whether finite is declared... yes
checking whether isnan is declared... yes
checking whether log1p is declared... yes
checking for long double stdio... yes
checking for extended floating point registers... yes
checking for IEEE arithmetic interface type... darwin86
checking for IEEE compiler flags... none
checking for IEEE comparisons... yes
checking for IEEE denormalized values... yes
configure: creating ./config.status
config.status: creating gsl_version.h
config.status: creating gsl.spec
config.status: creating gsl/Makefile
config.status: creating block/Makefile
config.status: creating matrix/Makefile
config.status: creating vector/Makefile
config.status: creating rng/Makefile
config.status: creating randist/Makefile
config.status: creating cdf/Makefile
config.status: creating cblas/Makefile
config.status: creating specfunc/Makefile
config.status: creating linalg/Makefile
config.status: creating statistics/Makefile
config.status: creating blas/Makefile
config.status: creating roots/Makefile
config.status: creating err/Makefile
config.status: creating min/Makefile
config.status: creating permutation/Makefile
config.status: creating complex/Makefile
config.status: creating sys/Makefile
config.status: creating eigen/Makefile
config.status: creating Makefile
config.status: creating config.h
config.status: executing libtool commands
Making install in gsl
make[2]: Nothing to be done for `install-exec-am'.
make[2]: Nothing to be done for `install-data-am'.
Making install in block
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o init.lo init.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c init.c -fno-common -DPIC -o .libs/init.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o file.lo file.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c file.c -fno-common -DPIC -o .libs/file.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o block.lo block.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c block.c -fno-common -DPIC -o .libs/block.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslblock.la init.lo file.lo block.lo -lm
libtool: link: ar cru .libs/libgslblock.a .libs/init.o .libs/file.o .libs/block.o
libtool: link: ranlib .libs/libgslblock.a
libtool: link: ( cd ".libs" && rm -f "libgslblock.la" && ln -s "../libgslblock.la" "libgslblock.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_block.h gsl_block_char.h gsl_block_complex_double.h gsl_block_complex_float.h gsl_block_complex_long_double.h gsl_block_double.h gsl_block_float.h gsl_block_int.h gsl_block_long.h gsl_block_long_double.h gsl_block_short.h gsl_block_uchar.h gsl_block_uint.h gsl_block_ulong.h gsl_block_ushort.h gsl_check_range.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in matrix
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o init.lo init.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c init.c -fno-common -DPIC -o .libs/init.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o matrix.lo matrix.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c matrix.c -fno-common -DPIC -o .libs/matrix.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o file.lo file.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c file.c -fno-common -DPIC -o .libs/file.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rowcol.lo rowcol.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rowcol.c -fno-common -DPIC -o .libs/rowcol.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o swap.lo swap.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c swap.c -fno-common -DPIC -o .libs/swap.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o copy.lo copy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c copy.c -fno-common -DPIC -o .libs/copy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o minmax.lo minmax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c minmax.c -fno-common -DPIC -o .libs/minmax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o prop.lo prop.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c prop.c -fno-common -DPIC -o .libs/prop.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o oper.lo oper.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c oper.c -fno-common -DPIC -o .libs/oper.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o getset.lo getset.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c getset.c -fno-common -DPIC -o .libs/getset.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o view.lo view.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c view.c -fno-common -DPIC -o .libs/view.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o submatrix.lo submatrix.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c submatrix.c -fno-common -DPIC -o .libs/submatrix.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslmatrix.la init.lo matrix.lo file.lo rowcol.lo swap.lo copy.lo minmax.lo prop.lo oper.lo getset.lo view.lo submatrix.lo -lm
libtool: link: ar cru .libs/libgslmatrix.a .libs/init.o .libs/matrix.o .libs/file.o .libs/rowcol.o .libs/swap.o .libs/copy.o .libs/minmax.o .libs/prop.o .libs/oper.o .libs/getset.o .libs/view.o .libs/submatrix.o
libtool: link: ranlib .libs/libgslmatrix.a
libtool: link: ( cd ".libs" && rm -f "libgslmatrix.la" && ln -s "../libgslmatrix.la" "libgslmatrix.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_matrix.h gsl_matrix_char.h gsl_matrix_complex_double.h gsl_matrix_complex_float.h gsl_matrix_complex_long_double.h gsl_matrix_double.h gsl_matrix_float.h gsl_matrix_int.h gsl_matrix_long.h gsl_matrix_long_double.h gsl_matrix_short.h gsl_matrix_uchar.h gsl_matrix_uint.h gsl_matrix_ulong.h gsl_matrix_ushort.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in vector
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o init.lo init.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c init.c -fno-common -DPIC -o .libs/init.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o file.lo file.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c file.c -fno-common -DPIC -o .libs/file.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o vector.lo vector.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c vector.c -fno-common -DPIC -o .libs/vector.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o copy.lo copy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c copy.c -fno-common -DPIC -o .libs/copy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o swap.lo swap.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c swap.c -fno-common -DPIC -o .libs/swap.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o prop.lo prop.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c prop.c -fno-common -DPIC -o .libs/prop.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o minmax.lo minmax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c minmax.c -fno-common -DPIC -o .libs/minmax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o oper.lo oper.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c oper.c -fno-common -DPIC -o .libs/oper.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o reim.lo reim.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c reim.c -fno-common -DPIC -o .libs/reim.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o subvector.lo subvector.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c subvector.c -fno-common -DPIC -o .libs/subvector.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o view.lo view.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c view.c -fno-common -DPIC -o .libs/view.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslvector.la init.lo file.lo vector.lo copy.lo swap.lo prop.lo minmax.lo oper.lo reim.lo subvector.lo view.lo -lm
libtool: link: ar cru .libs/libgslvector.a .libs/init.o .libs/file.o .libs/vector.o .libs/copy.o .libs/swap.o .libs/prop.o .libs/minmax.o .libs/oper.o .libs/reim.o .libs/subvector.o .libs/view.o
libtool: link: ranlib .libs/libgslvector.a
libtool: link: ( cd ".libs" && rm -f "libgslvector.la" && ln -s "../libgslvector.la" "libgslvector.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_vector.h gsl_vector_char.h gsl_vector_complex.h gsl_vector_complex_double.h gsl_vector_complex_float.h gsl_vector_complex_long_double.h gsl_vector_double.h gsl_vector_float.h gsl_vector_int.h gsl_vector_long.h gsl_vector_long_double.h gsl_vector_short.h gsl_vector_uchar.h gsl_vector_uint.h gsl_vector_ulong.h gsl_vector_ushort.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in rng
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o borosh13.lo borosh13.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c borosh13.c -fno-common -DPIC -o .libs/borosh13.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o cmrg.lo cmrg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cmrg.c -fno-common -DPIC -o .libs/cmrg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o coveyou.lo coveyou.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c coveyou.c -fno-common -DPIC -o .libs/coveyou.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o default.lo default.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c default.c -fno-common -DPIC -o .libs/default.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o file.lo file.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c file.c -fno-common -DPIC -o .libs/file.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fishman18.lo fishman18.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fishman18.c -fno-common -DPIC -o .libs/fishman18.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fishman20.lo fishman20.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fishman20.c -fno-common -DPIC -o .libs/fishman20.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fishman2x.lo fishman2x.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fishman2x.c -fno-common -DPIC -o .libs/fishman2x.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gfsr4.lo gfsr4.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gfsr4.c -fno-common -DPIC -o .libs/gfsr4.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o knuthran2.lo knuthran2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c knuthran2.c -fno-common -DPIC -o .libs/knuthran2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o knuthran.lo knuthran.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c knuthran.c -fno-common -DPIC -o .libs/knuthran.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o knuthran2002.lo knuthran2002.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c knuthran2002.c -fno-common -DPIC -o .libs/knuthran2002.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lecuyer21.lo lecuyer21.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lecuyer21.c -fno-common -DPIC -o .libs/lecuyer21.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o minstd.lo minstd.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c minstd.c -fno-common -DPIC -o .libs/minstd.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mrg.lo mrg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mrg.c -fno-common -DPIC -o .libs/mrg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mt.lo mt.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mt.c -fno-common -DPIC -o .libs/mt.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o r250.lo r250.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c r250.c -fno-common -DPIC -o .libs/r250.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ran0.lo ran0.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ran0.c -fno-common -DPIC -o .libs/ran0.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ran1.lo ran1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ran1.c -fno-common -DPIC -o .libs/ran1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ran2.lo ran2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ran2.c -fno-common -DPIC -o .libs/ran2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ran3.lo ran3.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ran3.c -fno-common -DPIC -o .libs/ran3.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rand48.lo rand48.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rand48.c -fno-common -DPIC -o .libs/rand48.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rand.lo rand.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rand.c -fno-common -DPIC -o .libs/rand.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o random.lo random.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c random.c -fno-common -DPIC -o .libs/random.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o randu.lo randu.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c randu.c -fno-common -DPIC -o .libs/randu.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ranf.lo ranf.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ranf.c -fno-common -DPIC -o .libs/ranf.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ranlux.lo ranlux.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ranlux.c -fno-common -DPIC -o .libs/ranlux.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ranlxd.lo ranlxd.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ranlxd.c -fno-common -DPIC -o .libs/ranlxd.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ranlxs.lo ranlxs.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ranlxs.c -fno-common -DPIC -o .libs/ranlxs.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ranmar.lo ranmar.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ranmar.c -fno-common -DPIC -o .libs/ranmar.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rng.lo rng.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rng.c -fno-common -DPIC -o .libs/rng.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o slatec.lo slatec.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c slatec.c -fno-common -DPIC -o .libs/slatec.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o taus.lo taus.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c taus.c -fno-common -DPIC -o .libs/taus.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o taus113.lo taus113.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c taus113.c -fno-common -DPIC -o .libs/taus113.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o transputer.lo transputer.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c transputer.c -fno-common -DPIC -o .libs/transputer.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o tt.lo tt.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c tt.c -fno-common -DPIC -o .libs/tt.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o types.lo types.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c types.c -fno-common -DPIC -o .libs/types.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o uni32.lo uni32.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c uni32.c -fno-common -DPIC -o .libs/uni32.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o uni.lo uni.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c uni.c -fno-common -DPIC -o .libs/uni.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o vax.lo vax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c vax.c -fno-common -DPIC -o .libs/vax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o waterman14.lo waterman14.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c waterman14.c -fno-common -DPIC -o .libs/waterman14.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o zuf.lo zuf.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zuf.c -fno-common -DPIC -o .libs/zuf.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o inline.lo inline.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c inline.c -fno-common -DPIC -o .libs/inline.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslrng.la borosh13.lo cmrg.lo coveyou.lo default.lo file.lo fishman18.lo fishman20.lo fishman2x.lo gfsr4.lo knuthran2.lo knuthran.lo knuthran2002.lo lecuyer21.lo minstd.lo mrg.lo mt.lo r250.lo ran0.lo ran1.lo ran2.lo ran3.lo rand48.lo rand.lo random.lo randu.lo ranf.lo ranlux.lo ranlxd.lo ranlxs.lo ranmar.lo rng.lo slatec.lo taus.lo taus113.lo transputer.lo tt.lo types.lo uni32.lo uni.lo vax.lo waterman14.lo zuf.lo inline.lo -lm
libtool: link: ar cru .libs/libgslrng.a .libs/borosh13.o .libs/cmrg.o .libs/coveyou.o .libs/default.o .libs/file.o .libs/fishman18.o .libs/fishman20.o .libs/fishman2x.o .libs/gfsr4.o .libs/knuthran2.o .libs/knuthran.o .libs/knuthran2002.o .libs/lecuyer21.o .libs/minstd.o .libs/mrg.o .libs/mt.o .libs/r250.o .libs/ran0.o .libs/ran1.o .libs/ran2.o .libs/ran3.o .libs/rand48.o .libs/rand.o .libs/random.o .libs/randu.o .libs/ranf.o .libs/ranlux.o .libs/ranlxd.o .libs/ranlxs.o .libs/ranmar.o .libs/rng.o .libs/slatec.o .libs/taus.o .libs/taus113.o .libs/transputer.o .libs/tt.o .libs/types.o .libs/uni32.o .libs/uni.o .libs/vax.o .libs/waterman14.o .libs/zuf.o .libs/inline.o
libtool: link: ranlib .libs/libgslrng.a
libtool: link: ( cd ".libs" && rm -f "libgslrng.la" && ln -s "../libgslrng.la" "libgslrng.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_rng.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in randist
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bernoulli.lo bernoulli.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bernoulli.c -fno-common -DPIC -o .libs/bernoulli.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o beta.lo beta.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c beta.c -fno-common -DPIC -o .libs/beta.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bigauss.lo bigauss.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bigauss.c -fno-common -DPIC -o .libs/bigauss.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o binomial.lo binomial.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c binomial.c -fno-common -DPIC -o .libs/binomial.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o cauchy.lo cauchy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cauchy.c -fno-common -DPIC -o .libs/cauchy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o chisq.lo chisq.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chisq.c -fno-common -DPIC -o .libs/chisq.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o dirichlet.lo dirichlet.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dirichlet.c -fno-common -DPIC -o .libs/dirichlet.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o discrete.lo discrete.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c discrete.c -fno-common -DPIC -o .libs/discrete.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o erlang.lo erlang.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c erlang.c -fno-common -DPIC -o .libs/erlang.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exponential.lo exponential.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exponential.c -fno-common -DPIC -o .libs/exponential.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exppow.lo exppow.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exppow.c -fno-common -DPIC -o .libs/exppow.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fdist.lo fdist.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fdist.c -fno-common -DPIC -o .libs/fdist.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o flat.lo flat.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c flat.c -fno-common -DPIC -o .libs/flat.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gamma.lo gamma.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gamma.c -fno-common -DPIC -o .libs/gamma.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gauss.lo gauss.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gauss.c -fno-common -DPIC -o .libs/gauss.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gausszig.lo gausszig.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gausszig.c -fno-common -DPIC -o .libs/gausszig.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gausstail.lo gausstail.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gausstail.c -fno-common -DPIC -o .libs/gausstail.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o geometric.lo geometric.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c geometric.c -fno-common -DPIC -o .libs/geometric.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gumbel.lo gumbel.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gumbel.c -fno-common -DPIC -o .libs/gumbel.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hyperg.lo hyperg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg.c -fno-common -DPIC -o .libs/hyperg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o laplace.lo laplace.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c laplace.c -fno-common -DPIC -o .libs/laplace.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o levy.lo levy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c levy.c -fno-common -DPIC -o .libs/levy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o logarithmic.lo logarithmic.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c logarithmic.c -fno-common -DPIC -o .libs/logarithmic.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o logistic.lo logistic.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c logistic.c -fno-common -DPIC -o .libs/logistic.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lognormal.lo lognormal.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lognormal.c -fno-common -DPIC -o .libs/lognormal.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o multinomial.lo multinomial.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c multinomial.c -fno-common -DPIC -o .libs/multinomial.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o nbinomial.lo nbinomial.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c nbinomial.c -fno-common -DPIC -o .libs/nbinomial.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pareto.lo pareto.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pareto.c -fno-common -DPIC -o .libs/pareto.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pascal.lo pascal.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pascal.c -fno-common -DPIC -o .libs/pascal.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o poisson.lo poisson.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c poisson.c -fno-common -DPIC -o .libs/poisson.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rayleigh.lo rayleigh.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rayleigh.c -fno-common -DPIC -o .libs/rayleigh.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o shuffle.lo shuffle.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c shuffle.c -fno-common -DPIC -o .libs/shuffle.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sphere.lo sphere.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sphere.c -fno-common -DPIC -o .libs/sphere.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o tdist.lo tdist.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c tdist.c -fno-common -DPIC -o .libs/tdist.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o weibull.lo weibull.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c weibull.c -fno-common -DPIC -o .libs/weibull.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o landau.lo landau.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c landau.c -fno-common -DPIC -o .libs/landau.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o binomial_tpe.lo binomial_tpe.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c binomial_tpe.c -fno-common -DPIC -o .libs/binomial_tpe.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslrandist.la bernoulli.lo beta.lo bigauss.lo binomial.lo cauchy.lo chisq.lo dirichlet.lo discrete.lo erlang.lo exponential.lo exppow.lo fdist.lo flat.lo gamma.lo gauss.lo gausszig.lo gausstail.lo geometric.lo gumbel.lo hyperg.lo laplace.lo levy.lo logarithmic.lo logistic.lo lognormal.lo multinomial.lo nbinomial.lo pareto.lo pascal.lo poisson.lo rayleigh.lo shuffle.lo sphere.lo tdist.lo weibull.lo landau.lo binomial_tpe.lo -lm
libtool: link: ar cru .libs/libgslrandist.a .libs/bernoulli.o .libs/beta.o .libs/bigauss.o .libs/binomial.o .libs/cauchy.o .libs/chisq.o .libs/dirichlet.o .libs/discrete.o .libs/erlang.o .libs/exponential.o .libs/exppow.o .libs/fdist.o .libs/flat.o .libs/gamma.o .libs/gauss.o .libs/gausszig.o .libs/gausstail.o .libs/geometric.o .libs/gumbel.o .libs/hyperg.o .libs/laplace.o .libs/levy.o .libs/logarithmic.o .libs/logistic.o .libs/lognormal.o .libs/multinomial.o .libs/nbinomial.o .libs/pareto.o .libs/pascal.o .libs/poisson.o .libs/rayleigh.o .libs/shuffle.o .libs/sphere.o .libs/tdist.o .libs/weibull.o .libs/landau.o .libs/binomial_tpe.o
libtool: link: ranlib .libs/libgslrandist.a
libtool: link: ( cd ".libs" && rm -f "libgslrandist.la" && ln -s "../libgslrandist.la" "libgslrandist.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_randist.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in cdf
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o beta.lo beta.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c beta.c -fno-common -DPIC -o .libs/beta.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o betainv.lo betainv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c betainv.c -fno-common -DPIC -o .libs/betainv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o cauchy.lo cauchy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cauchy.c -fno-common -DPIC -o .libs/cauchy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o cauchyinv.lo cauchyinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cauchyinv.c -fno-common -DPIC -o .libs/cauchyinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o chisq.lo chisq.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chisq.c -fno-common -DPIC -o .libs/chisq.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o chisqinv.lo chisqinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chisqinv.c -fno-common -DPIC -o .libs/chisqinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exponential.lo exponential.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exponential.c -fno-common -DPIC -o .libs/exponential.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exponentialinv.lo exponentialinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exponentialinv.c -fno-common -DPIC -o .libs/exponentialinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exppow.lo exppow.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exppow.c -fno-common -DPIC -o .libs/exppow.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fdist.lo fdist.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fdist.c -fno-common -DPIC -o .libs/fdist.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fdistinv.lo fdistinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fdistinv.c -fno-common -DPIC -o .libs/fdistinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o flat.lo flat.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c flat.c -fno-common -DPIC -o .libs/flat.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o flatinv.lo flatinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c flatinv.c -fno-common -DPIC -o .libs/flatinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gamma.lo gamma.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gamma.c -fno-common -DPIC -o .libs/gamma.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gammainv.lo gammainv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gammainv.c -fno-common -DPIC -o .libs/gammainv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gauss.lo gauss.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gauss.c -fno-common -DPIC -o .libs/gauss.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gaussinv.lo gaussinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gaussinv.c -fno-common -DPIC -o .libs/gaussinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gumbel1.lo gumbel1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gumbel1.c -fno-common -DPIC -o .libs/gumbel1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gumbel1inv.lo gumbel1inv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gumbel1inv.c -fno-common -DPIC -o .libs/gumbel1inv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gumbel2.lo gumbel2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gumbel2.c -fno-common -DPIC -o .libs/gumbel2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gumbel2inv.lo gumbel2inv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gumbel2inv.c -fno-common -DPIC -o .libs/gumbel2inv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o laplace.lo laplace.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c laplace.c -fno-common -DPIC -o .libs/laplace.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o laplaceinv.lo laplaceinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c laplaceinv.c -fno-common -DPIC -o .libs/laplaceinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o logistic.lo logistic.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c logistic.c -fno-common -DPIC -o .libs/logistic.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o logisticinv.lo logisticinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c logisticinv.c -fno-common -DPIC -o .libs/logisticinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lognormal.lo lognormal.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lognormal.c -fno-common -DPIC -o .libs/lognormal.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lognormalinv.lo lognormalinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lognormalinv.c -fno-common -DPIC -o .libs/lognormalinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pareto.lo pareto.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pareto.c -fno-common -DPIC -o .libs/pareto.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o paretoinv.lo paretoinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c paretoinv.c -fno-common -DPIC -o .libs/paretoinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rayleigh.lo rayleigh.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rayleigh.c -fno-common -DPIC -o .libs/rayleigh.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o rayleighinv.lo rayleighinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c rayleighinv.c -fno-common -DPIC -o .libs/rayleighinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o tdist.lo tdist.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c tdist.c -fno-common -DPIC -o .libs/tdist.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o tdistinv.lo tdistinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c tdistinv.c -fno-common -DPIC -o .libs/tdistinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o weibull.lo weibull.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c weibull.c -fno-common -DPIC -o .libs/weibull.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o weibullinv.lo weibullinv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c weibullinv.c -fno-common -DPIC -o .libs/weibullinv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o binomial.lo binomial.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c binomial.c -fno-common -DPIC -o .libs/binomial.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o poisson.lo poisson.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c poisson.c -fno-common -DPIC -o .libs/poisson.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o geometric.lo geometric.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c geometric.c -fno-common -DPIC -o .libs/geometric.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o nbinomial.lo nbinomial.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c nbinomial.c -fno-common -DPIC -o .libs/nbinomial.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pascal.lo pascal.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pascal.c -fno-common -DPIC -o .libs/pascal.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hypergeometric.lo hypergeometric.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hypergeometric.c -fno-common -DPIC -o .libs/hypergeometric.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslcdf.la beta.lo betainv.lo cauchy.lo cauchyinv.lo chisq.lo chisqinv.lo exponential.lo exponentialinv.lo exppow.lo fdist.lo fdistinv.lo flat.lo flatinv.lo gamma.lo gammainv.lo gauss.lo gaussinv.lo gumbel1.lo gumbel1inv.lo gumbel2.lo gumbel2inv.lo laplace.lo laplaceinv.lo logistic.lo logisticinv.lo lognormal.lo lognormalinv.lo pareto.lo paretoinv.lo rayleigh.lo rayleighinv.lo tdist.lo tdistinv.lo weibull.lo weibullinv.lo binomial.lo poisson.lo geometric.lo nbinomial.lo pascal.lo hypergeometric.lo -lm
libtool: link: ar cru .libs/libgslcdf.a .libs/beta.o .libs/betainv.o .libs/cauchy.o .libs/cauchyinv.o .libs/chisq.o .libs/chisqinv.o .libs/exponential.o .libs/exponentialinv.o .libs/exppow.o .libs/fdist.o .libs/fdistinv.o .libs/flat.o .libs/flatinv.o .libs/gamma.o .libs/gammainv.o .libs/gauss.o .libs/gaussinv.o .libs/gumbel1.o .libs/gumbel1inv.o .libs/gumbel2.o .libs/gumbel2inv.o .libs/laplace.o .libs/laplaceinv.o .libs/logistic.o .libs/logisticinv.o .libs/lognormal.o .libs/lognormalinv.o .libs/pareto.o .libs/paretoinv.o .libs/rayleigh.o .libs/rayleighinv.o .libs/tdist.o .libs/tdistinv.o .libs/weibull.o .libs/weibullinv.o .libs/binomial.o .libs/poisson.o .libs/geometric.o .libs/nbinomial.o .libs/pascal.o .libs/hypergeometric.o
libtool: link: ranlib .libs/libgslcdf.a
libtool: link: ( cd ".libs" && rm -f "libgslcdf.la" && ln -s "../libgslcdf.la" "libgslcdf.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_cdf.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in cblas
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sasum.lo sasum.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sasum.c -fno-common -DPIC -o .libs/sasum.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o saxpy.lo saxpy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c saxpy.c -fno-common -DPIC -o .libs/saxpy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o scasum.lo scasum.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c scasum.c -fno-common -DPIC -o .libs/scasum.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o scnrm2.lo scnrm2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c scnrm2.c -fno-common -DPIC -o .libs/scnrm2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o scopy.lo scopy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c scopy.c -fno-common -DPIC -o .libs/scopy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sdot.lo sdot.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sdot.c -fno-common -DPIC -o .libs/sdot.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sdsdot.lo sdsdot.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sdsdot.c -fno-common -DPIC -o .libs/sdsdot.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sgbmv.lo sgbmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sgbmv.c -fno-common -DPIC -o .libs/sgbmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sgemm.lo sgemm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sgemm.c -fno-common -DPIC -o .libs/sgemm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sgemv.lo sgemv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sgemv.c -fno-common -DPIC -o .libs/sgemv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sger.lo sger.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sger.c -fno-common -DPIC -o .libs/sger.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o snrm2.lo snrm2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c snrm2.c -fno-common -DPIC -o .libs/snrm2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o srot.lo srot.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c srot.c -fno-common -DPIC -o .libs/srot.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o srotg.lo srotg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c srotg.c -fno-common -DPIC -o .libs/srotg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o srotm.lo srotm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c srotm.c -fno-common -DPIC -o .libs/srotm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o srotmg.lo srotmg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c srotmg.c -fno-common -DPIC -o .libs/srotmg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssbmv.lo ssbmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssbmv.c -fno-common -DPIC -o .libs/ssbmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sscal.lo sscal.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sscal.c -fno-common -DPIC -o .libs/sscal.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sspmv.lo sspmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sspmv.c -fno-common -DPIC -o .libs/sspmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sspr.lo sspr.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sspr.c -fno-common -DPIC -o .libs/sspr.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sspr2.lo sspr2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sspr2.c -fno-common -DPIC -o .libs/sspr2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sswap.lo sswap.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sswap.c -fno-common -DPIC -o .libs/sswap.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssymm.lo ssymm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssymm.c -fno-common -DPIC -o .libs/ssymm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssymv.lo ssymv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssymv.c -fno-common -DPIC -o .libs/ssymv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssyr.lo ssyr.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssyr.c -fno-common -DPIC -o .libs/ssyr.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssyr2.lo ssyr2.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssyr2.c -fno-common -DPIC -o .libs/ssyr2.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssyr2k.lo ssyr2k.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssyr2k.c -fno-common -DPIC -o .libs/ssyr2k.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ssyrk.lo ssyrk.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ssyrk.c -fno-common -DPIC -o .libs/ssyrk.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o stbmv.lo stbmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c stbmv.c -fno-common -DPIC -o .libs/stbmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o stbsv.lo stbsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c stbsv.c -fno-common -DPIC -o .libs/stbsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o stpmv.lo stpmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c stpmv.c -fno-common -DPIC -o .libs/stpmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o stpsv.lo stpsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c stpsv.c -fno-common -DPIC -o .libs/stpsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o strmm.lo strmm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c strmm.c -fno-common -DPIC -o .libs/strmm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o strmv.lo strmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c strmv.c -fno-common -DPIC -o .libs/strmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o strsm.lo strsm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c strsm.c -fno-common -DPIC -o .libs/strsm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o strsv.lo strsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c strsv.c -fno-common -DPIC -o .libs/strsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o dasum.lo dasum.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dasum.c -fno-common -DPIC -o .libs/dasum.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o daxpy.lo daxpy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c daxpy.c -fno-common -DPIC -o .libs/daxpy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o dcopy.lo dcopy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dcopy.c -fno-common -DPIC -o .libs/dcopy.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ddot.c -fno-common -DPIC -o .libs/ddot.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dgbmv.c -fno-common -DPIC -o .libs/dgbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dgemm.c -fno-common -DPIC -o .libs/dgemm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dgemv.c -fno-common -DPIC -o .libs/dgemv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dger.c -fno-common -DPIC -o .libs/dger.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dnrm2.c -fno-common -DPIC -o .libs/dnrm2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c drot.c -fno-common -DPIC -o .libs/drot.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c drotg.c -fno-common -DPIC -o .libs/drotg.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c drotm.c -fno-common -DPIC -o .libs/drotm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c drotmg.c -fno-common -DPIC -o .libs/drotmg.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsbmv.c -fno-common -DPIC -o .libs/dsbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dscal.c -fno-common -DPIC -o .libs/dscal.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsdot.c -fno-common -DPIC -o .libs/dsdot.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dspmv.c -fno-common -DPIC -o .libs/dspmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dspr.c -fno-common -DPIC -o .libs/dspr.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dspr2.c -fno-common -DPIC -o .libs/dspr2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dswap.c -fno-common -DPIC -o .libs/dswap.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsymm.c -fno-common -DPIC -o .libs/dsymm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsymv.c -fno-common -DPIC -o .libs/dsymv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsyr.c -fno-common -DPIC -o .libs/dsyr.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsyr2.c -fno-common -DPIC -o .libs/dsyr2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsyr2k.c -fno-common -DPIC -o .libs/dsyr2k.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dsyrk.c -fno-common -DPIC -o .libs/dsyrk.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtbmv.c -fno-common -DPIC -o .libs/dtbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtbsv.c -fno-common -DPIC -o .libs/dtbsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtpmv.c -fno-common -DPIC -o .libs/dtpmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtpsv.c -fno-common -DPIC -o .libs/dtpsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtrmm.c -fno-common -DPIC -o .libs/dtrmm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtrmv.c -fno-common -DPIC -o .libs/dtrmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtrsm.c -fno-common -DPIC -o .libs/dtrsm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dtrsv.c -fno-common -DPIC -o .libs/dtrsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dzasum.c -fno-common -DPIC -o .libs/dzasum.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dznrm2.c -fno-common -DPIC -o .libs/dznrm2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c caxpy.c -fno-common -DPIC -o .libs/caxpy.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ccopy.c -fno-common -DPIC -o .libs/ccopy.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cdotc_sub.c -fno-common -DPIC -o .libs/cdotc_sub.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cdotu_sub.c -fno-common -DPIC -o .libs/cdotu_sub.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cgbmv.c -fno-common -DPIC -o .libs/cgbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cgemm.c -fno-common -DPIC -o .libs/cgemm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cgemv.c -fno-common -DPIC -o .libs/cgemv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cgerc.c -fno-common -DPIC -o .libs/cgerc.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cgeru.c -fno-common -DPIC -o .libs/cgeru.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chbmv.c -fno-common -DPIC -o .libs/chbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chemm.c -fno-common -DPIC -o .libs/chemm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chemv.c -fno-common -DPIC -o .libs/chemv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cher.c -fno-common -DPIC -o .libs/cher.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cher2.c -fno-common -DPIC -o .libs/cher2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cher2k.c -fno-common -DPIC -o .libs/cher2k.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cherk.c -fno-common -DPIC -o .libs/cherk.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chpmv.c -fno-common -DPIC -o .libs/chpmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chpr.c -fno-common -DPIC -o .libs/chpr.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c chpr2.c -fno-common -DPIC -o .libs/chpr2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cscal.c -fno-common -DPIC -o .libs/cscal.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c csscal.c -fno-common -DPIC -o .libs/csscal.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cswap.c -fno-common -DPIC -o .libs/cswap.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c csymm.c -fno-common -DPIC -o .libs/csymm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c csyr2k.c -fno-common -DPIC -o .libs/csyr2k.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c csyrk.c -fno-common -DPIC -o .libs/csyrk.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctbmv.c -fno-common -DPIC -o .libs/ctbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctbsv.c -fno-common -DPIC -o .libs/ctbsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctpmv.c -fno-common -DPIC -o .libs/ctpmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctpsv.c -fno-common -DPIC -o .libs/ctpsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctrmm.c -fno-common -DPIC -o .libs/ctrmm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctrmv.c -fno-common -DPIC -o .libs/ctrmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctrsm.c -fno-common -DPIC -o .libs/ctrsm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ctrsv.c -fno-common -DPIC -o .libs/ctrsv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zaxpy.c -fno-common -DPIC -o .libs/zaxpy.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zcopy.c -fno-common -DPIC -o .libs/zcopy.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zdotc_sub.c -fno-common -DPIC -o .libs/zdotc_sub.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zdotu_sub.c -fno-common -DPIC -o .libs/zdotu_sub.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zdscal.c -fno-common -DPIC -o .libs/zdscal.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zgbmv.c -fno-common -DPIC -o .libs/zgbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zgemm.c -fno-common -DPIC -o .libs/zgemm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zgemv.c -fno-common -DPIC -o .libs/zgemv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zgerc.c -fno-common -DPIC -o .libs/zgerc.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zgeru.c -fno-common -DPIC -o .libs/zgeru.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhbmv.c -fno-common -DPIC -o .libs/zhbmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhemm.c -fno-common -DPIC -o .libs/zhemm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhemv.c -fno-common -DPIC -o .libs/zhemv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zher.c -fno-common -DPIC -o .libs/zher.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zher2.c -fno-common -DPIC -o .libs/zher2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zher2k.c -fno-common -DPIC -o .libs/zher2k.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zherk.c -fno-common -DPIC -o .libs/zherk.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhpmv.c -fno-common -DPIC -o .libs/zhpmv.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhpr.c -fno-common -DPIC -o .libs/zhpr.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zhpr2.c -fno-common -DPIC -o .libs/zhpr2.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zscal.c -fno-common -DPIC -o .libs/zscal.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zswap.c -fno-common -DPIC -o .libs/zswap.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zsymm.c -fno-common -DPIC -o .libs/zsymm.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zsyr2k.c -fno-common -DPIC -o .libs/zsyr2k.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o zsyrk.lo zsyrk.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zsyrk.c -fno-common -DPIC -o .libs/zsyrk.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztbmv.lo ztbmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztbmv.c -fno-common -DPIC -o .libs/ztbmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztbsv.lo ztbsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztbsv.c -fno-common -DPIC -o .libs/ztbsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztpmv.lo ztpmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztpmv.c -fno-common -DPIC -o .libs/ztpmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztpsv.lo ztpsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztpsv.c -fno-common -DPIC -o .libs/ztpsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztrmm.lo ztrmm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztrmm.c -fno-common -DPIC -o .libs/ztrmm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztrmv.lo ztrmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztrmv.c -fno-common -DPIC -o .libs/ztrmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztrsm.lo ztrsm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztrsm.c -fno-common -DPIC -o .libs/ztrsm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ztrsv.lo ztrsv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ztrsv.c -fno-common -DPIC -o .libs/ztrsv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o icamax.lo icamax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c icamax.c -fno-common -DPIC -o .libs/icamax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o idamax.lo idamax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c idamax.c -fno-common -DPIC -o .libs/idamax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o isamax.lo isamax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c isamax.c -fno-common -DPIC -o .libs/isamax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o izamax.lo izamax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c izamax.c -fno-common -DPIC -o .libs/izamax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o xerbla.lo xerbla.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c xerbla.c -fno-common -DPIC -o .libs/xerbla.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -version-info 0:0:0 -L/usr/local/lib -L/usr/local/lib -o libgslcblas.la -rpath /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib sasum.lo saxpy.lo scasum.lo scnrm2.lo scopy.lo sdot.lo sdsdot.lo sgbmv.lo sgemm.lo sgemv.lo sger.lo snrm2.lo srot.lo srotg.lo srotm.lo srotmg.lo ssbmv.lo sscal.lo sspmv.lo sspr.lo sspr2.lo sswap.lo ssymm.lo ssymv.lo ssyr.lo ssyr2.lo ssyr2k.lo ssyrk.lo stbmv.lo stbsv.lo stpmv.lo stpsv.lo strmm.lo strmv.lo strsm.lo strsv.lo dasum.lo daxpy.lo dcopy.lo ddot.lo dgbmv.lo dgemm.lo dgemv.lo dger.lo dnrm2.lo drot.lo drotg.lo drotm.lo drotmg.lo dsbmv.lo dscal.lo dsdot.lo dspmv.lo dspr.lo dspr2.lo dswap.lo dsymm.lo dsymv.lo dsyr.lo dsyr2.lo dsyr2k.lo dsyrk.lo dtbmv.lo dtbsv.lo dtpmv.lo dtpsv.lo dtrmm.lo dtrmv.lo dtrsm.lo dtrsv.lo dzasum.lo dznrm2.lo caxpy.lo ccopy.lo cdotc_sub.lo cdotu_sub.lo cgbmv.lo cgemm.lo cgemv.lo cgerc.lo cgeru.lo chbmv.lo chemm.lo chemv.lo cher.lo cher2.lo cher2k.lo cherk.lo chpmv.lo chpr.lo chpr2.lo cscal.lo csscal.lo cswap.lo csymm.lo csyr2k.lo csyrk.lo ctbmv.lo ctbsv.lo ctpmv.lo ctpsv.lo ctrmm.lo ctrmv.lo ctrsm.lo ctrsv.lo zaxpy.lo zcopy.lo zdotc_sub.lo zdotu_sub.lo zdscal.lo zgbmv.lo zgemm.lo zgemv.lo zgerc.lo zgeru.lo zhbmv.lo zhemm.lo zhemv.lo zher.lo zher2.lo zher2k.lo zherk.lo zhpmv.lo zhpr.lo zhpr2.lo zscal.lo zswap.lo zsymm.lo zsyr2k.lo zsyrk.lo ztbmv.lo ztbsv.lo ztpmv.lo ztpsv.lo ztrmm.lo ztrmv.lo ztrsm.lo ztrsv.lo icamax.lo idamax.lo isamax.lo izamax.lo xerbla.lo -lm
libtool: link: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libgslcblas.0.dylib .libs/sasum.o .libs/saxpy.o .libs/scasum.o .libs/scnrm2.o .libs/scopy.o .libs/sdot.o .libs/sdsdot.o .libs/sgbmv.o .libs/sgemm.o .libs/sgemv.o .libs/sger.o .libs/snrm2.o .libs/srot.o .libs/srotg.o .libs/srotm.o .libs/srotmg.o .libs/ssbmv.o .libs/sscal.o .libs/sspmv.o .libs/sspr.o .libs/sspr2.o .libs/sswap.o .libs/ssymm.o .libs/ssymv.o .libs/ssyr.o .libs/ssyr2.o .libs/ssyr2k.o .libs/ssyrk.o .libs/stbmv.o .libs/stbsv.o .libs/stpmv.o .libs/stpsv.o .libs/strmm.o .libs/strmv.o .libs/strsm.o .libs/strsv.o .libs/dasum.o .libs/daxpy.o .libs/dcopy.o .libs/ddot.o .libs/dgbmv.o .libs/dgemm.o .libs/dgemv.o .libs/dger.o .libs/dnrm2.o .libs/drot.o .libs/drotg.o .libs/drotm.o .libs/drotmg.o .libs/dsbmv.o .libs/dscal.o .libs/dsdot.o .libs/dspmv.o .libs/dspr.o .libs/dspr2.o .libs/dswap.o .libs/dsymm.o .libs/dsymv.o .libs/dsyr.o .libs/dsyr2.o .libs/dsyr2k.o .libs/dsyrk.o .libs/dtbmv.o .libs/dtbsv.o .libs/dtpmv.o .libs/dtpsv.o .libs/dtrmm.o .libs/dtrmv.o .libs/dtrsm.o .libs/dtrsv.o .libs/dzasum.o .libs/dznrm2.o .libs/caxpy.o .libs/ccopy.o .libs/cdotc_sub.o .libs/cdotu_sub.o .libs/cgbmv.o .libs/cgemm.o .libs/cgemv.o .libs/cgerc.o .libs/cgeru.o .libs/chbmv.o .libs/chemm.o .libs/chemv.o .libs/cher.o .libs/cher2.o .libs/cher2k.o .libs/cherk.o .libs/chpmv.o .libs/chpr.o .libs/chpr2.o .libs/cscal.o .libs/csscal.o .libs/cswap.o .libs/csymm.o .libs/csyr2k.o .libs/csyrk.o .libs/ctbmv.o .libs/ctbsv.o .libs/ctpmv.o .libs/ctpsv.o .libs/ctrmm.o .libs/ctrmv.o .libs/ctrsm.o .libs/ctrsv.o .libs/zaxpy.o .libs/zcopy.o .libs/zdotc_sub.o .libs/zdotu_sub.o .libs/zdscal.o .libs/zgbmv.o .libs/zgemm.o .libs/zgemv.o .libs/zgerc.o .libs/zgeru.o .libs/zhbmv.o .libs/zhemm.o .libs/zhemv.o .libs/zher.o .libs/zher2.o .libs/zher2k.o .libs/zherk.o .libs/zhpmv.o .libs/zhpr.o .libs/zhpr2.o .libs/zscal.o .libs/zswap.o .libs/zsymm.o .libs/zsyr2k.o .libs/zsyrk.o .libs/ztbmv.o .libs/ztbsv.o .libs/ztpmv.o .libs/ztpsv.o .libs/ztrmm.o .libs/ztrmv.o .libs/ztrsm.o .libs/ztrsv.o .libs/icamax.o .libs/idamax.o .libs/isamax.o .libs/izamax.o .libs/xerbla.o -L/usr/local/lib -lm -arch x86_64 -mtune=core2 -install_name /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgslcblas.0.dylib -compatibility_version 1 -current_version 1.0 -Wl,-single_module
libtool: link: dsymutil .libs/libgslcblas.0.dylib || :
libtool: link: (cd ".libs" && rm -f "libgslcblas.dylib" && ln -s "libgslcblas.0.dylib" "libgslcblas.dylib")
libtool: link: ( cd ".libs" && rm -f "libgslcblas.la" && ln -s "../libgslcblas.la" "libgslcblas.la" )
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib"
/bin/sh ../libtool --mode=install /usr/bin/install -c libgslcblas.la '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib'
libtool: install: /usr/bin/install -c .libs/libgslcblas.0.dylib /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgslcblas.0.dylib
libtool: install: (cd /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib && { ln -s -f libgslcblas.0.dylib libgslcblas.dylib || { rm -f libgslcblas.dylib && ln -s libgslcblas.0.dylib libgslcblas.dylib; }; })
libtool: install: /usr/bin/install -c .libs/libgslcblas.lai /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgslcblas.la
----------------------------------------------------------------------
Libraries have been installed in:
/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib
If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the `-LLIBDIR'
flag during linking and do at least one of the following:
- add LIBDIR to the `DYLD_LIBRARY_PATH' environment variable
during execution
See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_cblas.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in specfunc
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o airy.lo airy.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c airy.c -fno-common -DPIC -o .libs/airy.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o airy_der.lo airy_der.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c airy_der.c -fno-common -DPIC -o .libs/airy_der.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o airy_zero.lo airy_zero.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c airy_zero.c -fno-common -DPIC -o .libs/airy_zero.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o atanint.lo atanint.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c atanint.c -fno-common -DPIC -o .libs/atanint.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel.lo bessel.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel.c -fno-common -DPIC -o .libs/bessel.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_I0.lo bessel_I0.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_I0.c -fno-common -DPIC -o .libs/bessel_I0.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_I1.lo bessel_I1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_I1.c -fno-common -DPIC -o .libs/bessel_I1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_In.lo bessel_In.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_In.c -fno-common -DPIC -o .libs/bessel_In.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_Inu.lo bessel_Inu.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Inu.c -fno-common -DPIC -o .libs/bessel_Inu.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_J0.lo bessel_J0.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_J0.c -fno-common -DPIC -o .libs/bessel_J0.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_J1.lo bessel_J1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_J1.c -fno-common -DPIC -o .libs/bessel_J1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_Jn.lo bessel_Jn.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Jn.c -fno-common -DPIC -o .libs/bessel_Jn.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_Jnu.lo bessel_Jnu.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Jnu.c -fno-common -DPIC -o .libs/bessel_Jnu.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bessel_K0.lo bessel_K0.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_K0.c -fno-common -DPIC -o .libs/bessel_K0.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_K1.c -fno-common -DPIC -o .libs/bessel_K1.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Kn.c -fno-common -DPIC -o .libs/bessel_Kn.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Knu.c -fno-common -DPIC -o .libs/bessel_Knu.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Y0.c -fno-common -DPIC -o .libs/bessel_Y0.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Y1.c -fno-common -DPIC -o .libs/bessel_Y1.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Yn.c -fno-common -DPIC -o .libs/bessel_Yn.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_Ynu.c -fno-common -DPIC -o .libs/bessel_Ynu.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_amp_phase.c -fno-common -DPIC -o .libs/bessel_amp_phase.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_i.c -fno-common -DPIC -o .libs/bessel_i.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_j.c -fno-common -DPIC -o .libs/bessel_j.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_k.c -fno-common -DPIC -o .libs/bessel_k.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_olver.c -fno-common -DPIC -o .libs/bessel_olver.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_temme.c -fno-common -DPIC -o .libs/bessel_temme.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_y.c -fno-common -DPIC -o .libs/bessel_y.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_zero.c -fno-common -DPIC -o .libs/bessel_zero.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bessel_sequence.c -fno-common -DPIC -o .libs/bessel_sequence.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c beta.c -fno-common -DPIC -o .libs/beta.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c beta_inc.c -fno-common -DPIC -o .libs/beta_inc.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c clausen.c -fno-common -DPIC -o .libs/clausen.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c coulomb.c -fno-common -DPIC -o .libs/coulomb.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c coupling.c -fno-common -DPIC -o .libs/coupling.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c coulomb_bound.c -fno-common -DPIC -o .libs/coulomb_bound.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dawson.c -fno-common -DPIC -o .libs/dawson.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c debye.c -fno-common -DPIC -o .libs/debye.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c dilog.c -fno-common -DPIC -o .libs/dilog.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c elementary.c -fno-common -DPIC -o .libs/elementary.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ellint.c -fno-common -DPIC -o .libs/ellint.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c elljac.c -fno-common -DPIC -o .libs/elljac.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c erfc.c -fno-common -DPIC -o .libs/erfc.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exp.c -fno-common -DPIC -o .libs/exp.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c expint.c -fno-common -DPIC -o .libs/expint.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c expint3.c -fno-common -DPIC -o .libs/expint3.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fermi_dirac.c -fno-common -DPIC -o .libs/fermi_dirac.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gegenbauer.c -fno-common -DPIC -o .libs/gegenbauer.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gamma.c -fno-common -DPIC -o .libs/gamma.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gamma_inc.c -fno-common -DPIC -o .libs/gamma_inc.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg_0F1.c -fno-common -DPIC -o .libs/hyperg_0F1.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg_2F0.c -fno-common -DPIC -o .libs/hyperg_2F0.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg_1F1.c -fno-common -DPIC -o .libs/hyperg_1F1.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg_2F1.c -fno-common -DPIC -o .libs/hyperg_2F1.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg_U.c -fno-common -DPIC -o .libs/hyperg_U.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hyperg.c -fno-common -DPIC -o .libs/hyperg.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c laguerre.c -fno-common -DPIC -o .libs/laguerre.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lambert.c -fno-common -DPIC -o .libs/lambert.o
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libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c legendre_H3d.c -fno-common -DPIC -o .libs/legendre_H3d.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o legendre_Qn.lo legendre_Qn.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c legendre_Qn.c -fno-common -DPIC -o .libs/legendre_Qn.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o legendre_con.lo legendre_con.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c legendre_con.c -fno-common -DPIC -o .libs/legendre_con.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o legendre_poly.lo legendre_poly.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c legendre_poly.c -fno-common -DPIC -o .libs/legendre_poly.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o log.lo log.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c log.c -fno-common -DPIC -o .libs/log.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mathieu_angfunc.lo mathieu_angfunc.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mathieu_angfunc.c -fno-common -DPIC -o .libs/mathieu_angfunc.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mathieu_charv.lo mathieu_charv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mathieu_charv.c -fno-common -DPIC -o .libs/mathieu_charv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mathieu_coeff.lo mathieu_coeff.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mathieu_coeff.c -fno-common -DPIC -o .libs/mathieu_coeff.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mathieu_radfunc.lo mathieu_radfunc.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mathieu_radfunc.c -fno-common -DPIC -o .libs/mathieu_radfunc.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mathieu_workspace.lo mathieu_workspace.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mathieu_workspace.c -fno-common -DPIC -o .libs/mathieu_workspace.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o poch.lo poch.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c poch.c -fno-common -DPIC -o .libs/poch.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pow_int.lo pow_int.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pow_int.c -fno-common -DPIC -o .libs/pow_int.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o psi.lo psi.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c psi.c -fno-common -DPIC -o .libs/psi.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o result.lo result.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c result.c -fno-common -DPIC -o .libs/result.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o shint.lo shint.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c shint.c -fno-common -DPIC -o .libs/shint.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sinint.lo sinint.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sinint.c -fno-common -DPIC -o .libs/sinint.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o synchrotron.lo synchrotron.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c synchrotron.c -fno-common -DPIC -o .libs/synchrotron.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o transport.lo transport.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c transport.c -fno-common -DPIC -o .libs/transport.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o trig.lo trig.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c trig.c -fno-common -DPIC -o .libs/trig.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o zeta.lo zeta.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c zeta.c -fno-common -DPIC -o .libs/zeta.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslspecfunc.la airy.lo airy_der.lo airy_zero.lo atanint.lo bessel.lo bessel_I0.lo bessel_I1.lo bessel_In.lo bessel_Inu.lo bessel_J0.lo bessel_J1.lo bessel_Jn.lo bessel_Jnu.lo bessel_K0.lo bessel_K1.lo bessel_Kn.lo bessel_Knu.lo bessel_Y0.lo bessel_Y1.lo bessel_Yn.lo bessel_Ynu.lo bessel_amp_phase.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_olver.lo bessel_temme.lo bessel_y.lo bessel_zero.lo bessel_sequence.lo beta.lo beta_inc.lo clausen.lo coulomb.lo coupling.lo coulomb_bound.lo dawson.lo debye.lo dilog.lo elementary.lo ellint.lo elljac.lo erfc.lo exp.lo expint.lo expint3.lo fermi_dirac.lo gegenbauer.lo gamma.lo gamma_inc.lo hyperg_0F1.lo hyperg_2F0.lo hyperg_1F1.lo hyperg_2F1.lo hyperg_U.lo hyperg.lo laguerre.lo lambert.lo legendre_H3d.lo legendre_Qn.lo legendre_con.lo legendre_poly.lo log.lo mathieu_angfunc.lo mathieu_charv.lo mathieu_coeff.lo mathieu_radfunc.lo mathieu_workspace.lo poch.lo pow_int.lo psi.lo result.lo shint.lo sinint.lo synchrotron.lo transport.lo trig.lo zeta.lo -lm
libtool: link: ar cru .libs/libgslspecfunc.a .libs/airy.o .libs/airy_der.o .libs/airy_zero.o .libs/atanint.o .libs/bessel.o .libs/bessel_I0.o .libs/bessel_I1.o .libs/bessel_In.o .libs/bessel_Inu.o .libs/bessel_J0.o .libs/bessel_J1.o .libs/bessel_Jn.o .libs/bessel_Jnu.o .libs/bessel_K0.o .libs/bessel_K1.o .libs/bessel_Kn.o .libs/bessel_Knu.o .libs/bessel_Y0.o .libs/bessel_Y1.o .libs/bessel_Yn.o .libs/bessel_Ynu.o .libs/bessel_amp_phase.o .libs/bessel_i.o .libs/bessel_j.o .libs/bessel_k.o .libs/bessel_olver.o .libs/bessel_temme.o .libs/bessel_y.o .libs/bessel_zero.o .libs/bessel_sequence.o .libs/beta.o .libs/beta_inc.o .libs/clausen.o .libs/coulomb.o .libs/coupling.o .libs/coulomb_bound.o .libs/dawson.o .libs/debye.o .libs/dilog.o .libs/elementary.o .libs/ellint.o .libs/elljac.o .libs/erfc.o .libs/exp.o .libs/expint.o .libs/expint3.o .libs/fermi_dirac.o .libs/gegenbauer.o .libs/gamma.o .libs/gamma_inc.o .libs/hyperg_0F1.o .libs/hyperg_2F0.o .libs/hyperg_1F1.o .libs/hyperg_2F1.o .libs/hyperg_U.o .libs/hyperg.o .libs/laguerre.o .libs/lambert.o .libs/legendre_H3d.o .libs/legendre_Qn.o .libs/legendre_con.o .libs/legendre_poly.o .libs/log.o .libs/mathieu_angfunc.o .libs/mathieu_charv.o .libs/mathieu_coeff.o .libs/mathieu_radfunc.o .libs/mathieu_workspace.o .libs/poch.o .libs/pow_int.o .libs/psi.o .libs/result.o .libs/shint.o .libs/sinint.o .libs/synchrotron.o .libs/transport.o .libs/trig.o .libs/zeta.o
libtool: link: ranlib .libs/libgslspecfunc.a
libtool: link: ( cd ".libs" && rm -f "libgslspecfunc.la" && ln -s "../libgslspecfunc.la" "libgslspecfunc.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_sf.h gsl_sf_airy.h gsl_sf_bessel.h gsl_sf_clausen.h gsl_sf_coulomb.h gsl_sf_coupling.h gsl_sf_dawson.h gsl_sf_debye.h gsl_sf_dilog.h gsl_sf_elementary.h gsl_sf_ellint.h gsl_sf_elljac.h gsl_sf_erf.h gsl_sf_exp.h gsl_sf_expint.h gsl_sf_fermi_dirac.h gsl_sf_gamma.h gsl_sf_gegenbauer.h gsl_sf_hyperg.h gsl_sf_laguerre.h gsl_sf_lambert.h gsl_sf_legendre.h gsl_sf_log.h gsl_sf_mathieu.h gsl_sf_pow_int.h gsl_sf_psi.h gsl_sf_result.h gsl_sf_synchrotron.h gsl_sf_transport.h gsl_sf_trig.h gsl_sf_zeta.h gsl_specfunc.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in linalg
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o multiply.lo multiply.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c multiply.c -fno-common -DPIC -o .libs/multiply.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o exponential.lo exponential.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c exponential.c -fno-common -DPIC -o .libs/exponential.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o tridiag.lo tridiag.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c tridiag.c -fno-common -DPIC -o .libs/tridiag.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lu.lo lu.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lu.c -fno-common -DPIC -o .libs/lu.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o luc.lo luc.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c luc.c -fno-common -DPIC -o .libs/luc.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hh.lo hh.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hh.c -fno-common -DPIC -o .libs/hh.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o qr.lo qr.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c qr.c -fno-common -DPIC -o .libs/qr.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o qrpt.lo qrpt.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c qrpt.c -fno-common -DPIC -o .libs/qrpt.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lq.lo lq.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lq.c -fno-common -DPIC -o .libs/lq.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ptlq.lo ptlq.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ptlq.c -fno-common -DPIC -o .libs/ptlq.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o svd.lo svd.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c svd.c -fno-common -DPIC -o .libs/svd.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o householder.lo householder.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c householder.c -fno-common -DPIC -o .libs/householder.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o householdercomplex.lo householdercomplex.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c householdercomplex.c -fno-common -DPIC -o .libs/householdercomplex.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hessenberg.lo hessenberg.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hessenberg.c -fno-common -DPIC -o .libs/hessenberg.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hesstri.lo hesstri.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hesstri.c -fno-common -DPIC -o .libs/hesstri.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o cholesky.lo cholesky.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c cholesky.c -fno-common -DPIC -o .libs/cholesky.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o choleskyc.lo choleskyc.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c choleskyc.c -fno-common -DPIC -o .libs/choleskyc.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o symmtd.lo symmtd.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c symmtd.c -fno-common -DPIC -o .libs/symmtd.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hermtd.lo hermtd.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hermtd.c -fno-common -DPIC -o .libs/hermtd.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bidiag.lo bidiag.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bidiag.c -fno-common -DPIC -o .libs/bidiag.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o balance.lo balance.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c balance.c -fno-common -DPIC -o .libs/balance.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o balancemat.lo balancemat.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c balancemat.c -fno-common -DPIC -o .libs/balancemat.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgsllinalg.la multiply.lo exponential.lo tridiag.lo lu.lo luc.lo hh.lo qr.lo qrpt.lo lq.lo ptlq.lo svd.lo householder.lo householdercomplex.lo hessenberg.lo hesstri.lo cholesky.lo choleskyc.lo symmtd.lo hermtd.lo bidiag.lo balance.lo balancemat.lo -lm
libtool: link: ar cru .libs/libgsllinalg.a .libs/multiply.o .libs/exponential.o .libs/tridiag.o .libs/lu.o .libs/luc.o .libs/hh.o .libs/qr.o .libs/qrpt.o .libs/lq.o .libs/ptlq.o .libs/svd.o .libs/householder.o .libs/householdercomplex.o .libs/hessenberg.o .libs/hesstri.o .libs/cholesky.o .libs/choleskyc.o .libs/symmtd.o .libs/hermtd.o .libs/bidiag.o .libs/balance.o .libs/balancemat.o
libtool: link: ranlib .libs/libgsllinalg.a
libtool: link: ( cd ".libs" && rm -f "libgsllinalg.la" && ln -s "../libgsllinalg.la" "libgsllinalg.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_linalg.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in statistics
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o mean.lo mean.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c mean.c -fno-common -DPIC -o .libs/mean.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o variance.lo variance.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c variance.c -fno-common -DPIC -o .libs/variance.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o absdev.lo absdev.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c absdev.c -fno-common -DPIC -o .libs/absdev.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o skew.lo skew.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c skew.c -fno-common -DPIC -o .libs/skew.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o kurtosis.lo kurtosis.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c kurtosis.c -fno-common -DPIC -o .libs/kurtosis.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o lag1.lo lag1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c lag1.c -fno-common -DPIC -o .libs/lag1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o p_variance.lo p_variance.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c p_variance.c -fno-common -DPIC -o .libs/p_variance.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o minmax.lo minmax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c minmax.c -fno-common -DPIC -o .libs/minmax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ttest.lo ttest.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ttest.c -fno-common -DPIC -o .libs/ttest.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o median.lo median.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c median.c -fno-common -DPIC -o .libs/median.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o covariance.lo covariance.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c covariance.c -fno-common -DPIC -o .libs/covariance.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o quantiles.lo quantiles.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c quantiles.c -fno-common -DPIC -o .libs/quantiles.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o wmean.lo wmean.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c wmean.c -fno-common -DPIC -o .libs/wmean.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o wvariance.lo wvariance.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c wvariance.c -fno-common -DPIC -o .libs/wvariance.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o wabsdev.lo wabsdev.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c wabsdev.c -fno-common -DPIC -o .libs/wabsdev.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o wskew.lo wskew.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c wskew.c -fno-common -DPIC -o .libs/wskew.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o wkurtosis.lo wkurtosis.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c wkurtosis.c -fno-common -DPIC -o .libs/wkurtosis.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslstatistics.la mean.lo variance.lo absdev.lo skew.lo kurtosis.lo lag1.lo p_variance.lo minmax.lo ttest.lo median.lo covariance.lo quantiles.lo wmean.lo wvariance.lo wabsdev.lo wskew.lo wkurtosis.lo -lm
libtool: link: ar cru .libs/libgslstatistics.a .libs/mean.o .libs/variance.o .libs/absdev.o .libs/skew.o .libs/kurtosis.o .libs/lag1.o .libs/p_variance.o .libs/minmax.o .libs/ttest.o .libs/median.o .libs/covariance.o .libs/quantiles.o .libs/wmean.o .libs/wvariance.o .libs/wabsdev.o .libs/wskew.o .libs/wkurtosis.o
libtool: link: ranlib .libs/libgslstatistics.a
libtool: link: ( cd ".libs" && rm -f "libgslstatistics.la" && ln -s "../libgslstatistics.la" "libgslstatistics.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_statistics.h gsl_statistics_char.h gsl_statistics_double.h gsl_statistics_float.h gsl_statistics_int.h gsl_statistics_long.h gsl_statistics_long_double.h gsl_statistics_short.h gsl_statistics_uchar.h gsl_statistics_uint.h gsl_statistics_ulong.h gsl_statistics_ushort.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in blas
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o blas.lo blas.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c blas.c -fno-common -DPIC -o .libs/blas.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslblas.la blas.lo -lm
libtool: link: ar cru .libs/libgslblas.a .libs/blas.o
libtool: link: ranlib .libs/libgslblas.a
libtool: link: ( cd ".libs" && rm -f "libgslblas.la" && ln -s "../libgslblas.la" "libgslblas.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_blas.h gsl_blas_types.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in roots
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bisection.lo bisection.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bisection.c -fno-common -DPIC -o .libs/bisection.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o brent.lo brent.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c brent.c -fno-common -DPIC -o .libs/brent.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o falsepos.lo falsepos.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c falsepos.c -fno-common -DPIC -o .libs/falsepos.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o newton.lo newton.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c newton.c -fno-common -DPIC -o .libs/newton.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o secant.lo secant.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c secant.c -fno-common -DPIC -o .libs/secant.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o steffenson.lo steffenson.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c steffenson.c -fno-common -DPIC -o .libs/steffenson.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o convergence.lo convergence.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c convergence.c -fno-common -DPIC -o .libs/convergence.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fsolver.lo fsolver.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fsolver.c -fno-common -DPIC -o .libs/fsolver.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fdfsolver.lo fdfsolver.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fdfsolver.c -fno-common -DPIC -o .libs/fdfsolver.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslroots.la bisection.lo brent.lo falsepos.lo newton.lo secant.lo steffenson.lo convergence.lo fsolver.lo fdfsolver.lo -lm
libtool: link: ar cru .libs/libgslroots.a .libs/bisection.o .libs/brent.o .libs/falsepos.o .libs/newton.o .libs/secant.o .libs/steffenson.o .libs/convergence.o .libs/fsolver.o .libs/fdfsolver.o
libtool: link: ranlib .libs/libgslroots.a
libtool: link: ( cd ".libs" && rm -f "libgslroots.la" && ln -s "../libgslroots.la" "libgslroots.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_roots.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in err
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o error.lo error.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c error.c -fno-common -DPIC -o .libs/error.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o stream.lo stream.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c stream.c -fno-common -DPIC -o .libs/stream.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o message.lo message.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c message.c -fno-common -DPIC -o .libs/message.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o strerror.lo strerror.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c strerror.c -fno-common -DPIC -o .libs/strerror.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslerr.la error.lo stream.lo message.lo strerror.lo -lm
libtool: link: ar cru .libs/libgslerr.a .libs/error.o .libs/stream.o .libs/message.o .libs/strerror.o
libtool: link: ranlib .libs/libgslerr.a
libtool: link: ( cd ".libs" && rm -f "libgslerr.la" && ln -s "../libgslerr.la" "libgslerr.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_errno.h gsl_message.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in min
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fsolver.lo fsolver.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fsolver.c -fno-common -DPIC -o .libs/fsolver.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o golden.lo golden.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c golden.c -fno-common -DPIC -o .libs/golden.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o brent.lo brent.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c brent.c -fno-common -DPIC -o .libs/brent.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o convergence.lo convergence.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c convergence.c -fno-common -DPIC -o .libs/convergence.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o bracketing.lo bracketing.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c bracketing.c -fno-common -DPIC -o .libs/bracketing.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o quad_golden.lo quad_golden.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c quad_golden.c -fno-common -DPIC -o .libs/quad_golden.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslmin.la fsolver.lo golden.lo brent.lo convergence.lo bracketing.lo quad_golden.lo -lm
libtool: link: ar cru .libs/libgslmin.a .libs/fsolver.o .libs/golden.o .libs/brent.o .libs/convergence.o .libs/bracketing.o .libs/quad_golden.o
libtool: link: ranlib .libs/libgslmin.a
libtool: link: ( cd ".libs" && rm -f "libgslmin.la" && ln -s "../libgslmin.la" "libgslmin.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_min.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in permutation
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o init.lo init.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c init.c -fno-common -DPIC -o .libs/init.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o file.lo file.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c file.c -fno-common -DPIC -o .libs/file.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o permutation.lo permutation.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c permutation.c -fno-common -DPIC -o .libs/permutation.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o permute.lo permute.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c permute.c -fno-common -DPIC -o .libs/permute.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o canonical.lo canonical.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c canonical.c -fno-common -DPIC -o .libs/canonical.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o inline.lo inline.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c inline.c -fno-common -DPIC -o .libs/inline.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslpermutation.la init.lo file.lo permutation.lo permute.lo canonical.lo inline.lo -lm
libtool: link: ar cru .libs/libgslpermutation.a .libs/init.o .libs/file.o .libs/permutation.o .libs/permute.o .libs/canonical.o .libs/inline.o
libtool: link: ranlib .libs/libgslpermutation.a
libtool: link: ( cd ".libs" && rm -f "libgslpermutation.la" && ln -s "../libgslpermutation.la" "libgslpermutation.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_permutation.h gsl_permute.h gsl_permute_char.h gsl_permute_complex_double.h gsl_permute_complex_float.h gsl_permute_complex_long_double.h gsl_permute_double.h gsl_permute_float.h gsl_permute_int.h gsl_permute_long.h gsl_permute_long_double.h gsl_permute_short.h gsl_permute_uchar.h gsl_permute_uint.h gsl_permute_ulong.h gsl_permute_ushort.h gsl_permute_vector.h gsl_permute_vector_char.h gsl_permute_vector_complex_double.h gsl_permute_vector_complex_float.h gsl_permute_vector_complex_long_double.h gsl_permute_vector_double.h gsl_permute_vector_float.h gsl_permute_vector_int.h gsl_permute_vector_long.h gsl_permute_vector_long_double.h gsl_permute_vector_short.h gsl_permute_vector_uchar.h gsl_permute_vector_uint.h gsl_permute_vector_ulong.h gsl_permute_vector_ushort.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in complex
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o math.lo math.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c math.c -fno-common -DPIC -o .libs/math.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o inline.lo inline.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c inline.c -fno-common -DPIC -o .libs/inline.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslcomplex.la math.lo inline.lo -lm
libtool: link: ar cru .libs/libgslcomplex.a .libs/math.o .libs/inline.o
libtool: link: ranlib .libs/libgslcomplex.a
libtool: link: ( cd ".libs" && rm -f "libgslcomplex.la" && ln -s "../libgslcomplex.la" "libgslcomplex.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_complex.h gsl_complex_math.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in sys
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o minmax.lo minmax.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c minmax.c -fno-common -DPIC -o .libs/minmax.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o prec.lo prec.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c prec.c -fno-common -DPIC -o .libs/prec.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hypot.lo hypot.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hypot.c -fno-common -DPIC -o .libs/hypot.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o log1p.lo log1p.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c log1p.c -fno-common -DPIC -o .libs/log1p.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o expm1.lo expm1.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c expm1.c -fno-common -DPIC -o .libs/expm1.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o coerce.lo coerce.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c coerce.c -fno-common -DPIC -o .libs/coerce.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o invhyp.lo invhyp.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c invhyp.c -fno-common -DPIC -o .libs/invhyp.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o pow_int.lo pow_int.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c pow_int.c -fno-common -DPIC -o .libs/pow_int.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o infnan.lo infnan.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c infnan.c -fno-common -DPIC -o .libs/infnan.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fdiv.lo fdiv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fdiv.c -fno-common -DPIC -o .libs/fdiv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o fcmp.lo fcmp.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c fcmp.c -fno-common -DPIC -o .libs/fcmp.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o ldfrexp.lo ldfrexp.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c ldfrexp.c -fno-common -DPIC -o .libs/ldfrexp.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgslsys.la minmax.lo prec.lo hypot.lo log1p.lo expm1.lo coerce.lo invhyp.lo pow_int.lo infnan.lo fdiv.lo fcmp.lo ldfrexp.lo -lm
libtool: link: ar cru .libs/libgslsys.a .libs/minmax.o .libs/prec.o .libs/hypot.o .libs/log1p.o .libs/expm1.o .libs/coerce.o .libs/invhyp.o .libs/pow_int.o .libs/infnan.o .libs/fdiv.o .libs/fcmp.o .libs/ldfrexp.o
libtool: link: ranlib .libs/libgslsys.a
libtool: link: ( cd ".libs" && rm -f "libgslsys.la" && ln -s "../libgslsys.la" "libgslsys.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_sys.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
Making install in eigen
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o jacobi.lo jacobi.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c jacobi.c -fno-common -DPIC -o .libs/jacobi.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o symm.lo symm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c symm.c -fno-common -DPIC -o .libs/symm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o symmv.lo symmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c symmv.c -fno-common -DPIC -o .libs/symmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o nonsymm.lo nonsymm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c nonsymm.c -fno-common -DPIC -o .libs/nonsymm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o nonsymmv.lo nonsymmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c nonsymmv.c -fno-common -DPIC -o .libs/nonsymmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o herm.lo herm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c herm.c -fno-common -DPIC -o .libs/herm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o hermv.lo hermv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c hermv.c -fno-common -DPIC -o .libs/hermv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gensymm.lo gensymm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gensymm.c -fno-common -DPIC -o .libs/gensymm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gensymmv.lo gensymmv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gensymmv.c -fno-common -DPIC -o .libs/gensymmv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o genherm.lo genherm.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c genherm.c -fno-common -DPIC -o .libs/genherm.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o genhermv.lo genhermv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c genhermv.c -fno-common -DPIC -o .libs/genhermv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o gen.lo gen.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gen.c -fno-common -DPIC -o .libs/gen.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o genv.lo genv.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c genv.c -fno-common -DPIC -o .libs/genv.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o sort.lo sort.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c sort.c -fno-common -DPIC -o .libs/sort.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o francis.lo francis.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c francis.c -fno-common -DPIC -o .libs/francis.o
/bin/sh ../libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o schur.lo schur.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c schur.c -fno-common -DPIC -o .libs/schur.o
/bin/sh ../libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o libgsleigen.la jacobi.lo symm.lo symmv.lo nonsymm.lo nonsymmv.lo herm.lo hermv.lo gensymm.lo gensymmv.lo genherm.lo genhermv.lo gen.lo genv.lo sort.lo francis.lo schur.lo -lm
libtool: link: ar cru .libs/libgsleigen.a .libs/jacobi.o .libs/symm.o .libs/symmv.o .libs/nonsymm.o .libs/nonsymmv.o .libs/herm.o .libs/hermv.o .libs/gensymm.o .libs/gensymmv.o .libs/genherm.o .libs/genhermv.o .libs/gen.o .libs/genv.o .libs/sort.o .libs/francis.o .libs/schur.o
libtool: link: ranlib .libs/libgsleigen.a
libtool: link: ( cd ".libs" && rm -f "libgsleigen.la" && ln -s "../libgsleigen.la" "libgsleigen.la" )
make[2]: Nothing to be done for `install-exec-am'.
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || .././install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_eigen.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
/bin/sh ./libtool --tag=CC --mode=compile llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c -o version.lo version.c
libtool: compile: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c version.c -fno-common -DPIC -o .libs/version.o
/bin/sh ./libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -version-info 14:0:14 -L/usr/local/lib -L/usr/local/lib -o libgsl.la -rpath /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib version.lo block/libgslblock.la matrix/libgslmatrix.la vector/libgslvector.la rng/libgslrng.la randist/libgslrandist.la cdf/libgslcdf.la cblas/libgslcblas.la specfunc/libgslspecfunc.la linalg/libgsllinalg.la statistics/libgslstatistics.la blas/libgslblas.la roots/libgslroots.la err/libgslerr.la min/libgslmin.la permutation/libgslpermutation.la complex/libgslcomplex.la sys/libgslsys.la eigen/libgsleigen.la -lm
libtool: link: (cd .libs/libgsl.lax/libgslblock.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/block/.libs/libgslblock.a")
libtool: link: (cd .libs/libgsl.lax/libgslmatrix.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/matrix/.libs/libgslmatrix.a")
libtool: link: (cd .libs/libgsl.lax/libgslvector.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/vector/.libs/libgslvector.a")
libtool: link: (cd .libs/libgsl.lax/libgslrng.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/rng/.libs/libgslrng.a")
libtool: link: (cd .libs/libgsl.lax/libgslrandist.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/randist/.libs/libgslrandist.a")
libtool: link: (cd .libs/libgsl.lax/libgslcdf.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/cdf/.libs/libgslcdf.a")
libtool: link: (cd .libs/libgsl.lax/libgslspecfunc.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/specfunc/.libs/libgslspecfunc.a")
libtool: link: (cd .libs/libgsl.lax/libgsllinalg.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/linalg/.libs/libgsllinalg.a")
libtool: link: (cd .libs/libgsl.lax/libgslstatistics.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/statistics/.libs/libgslstatistics.a")
libtool: link: (cd .libs/libgsl.lax/libgslblas.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/blas/.libs/libgslblas.a")
libtool: link: (cd .libs/libgsl.lax/libgslroots.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/roots/.libs/libgslroots.a")
libtool: link: (cd .libs/libgsl.lax/libgslerr.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/err/.libs/libgslerr.a")
libtool: link: (cd .libs/libgsl.lax/libgslmin.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/min/.libs/libgslmin.a")
libtool: link: (cd .libs/libgsl.lax/libgslpermutation.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/permutation/.libs/libgslpermutation.a")
libtool: link: (cd .libs/libgsl.lax/libgslcomplex.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/complex/.libs/libgslcomplex.a")
libtool: link: (cd .libs/libgsl.lax/libgslsys.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/sys/.libs/libgslsys.a")
libtool: link: (cd .libs/libgsl.lax/libgsleigen.a && ar x "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/eigen/.libs/libgsleigen.a")
libtool: link: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libgsl.0.dylib .libs/version.o .libs/libgsl.lax/libgslblock.a/block.o .libs/libgsl.lax/libgslblock.a/file.o .libs/libgsl.lax/libgslblock.a/init.o .libs/libgsl.lax/libgslmatrix.a/copy.o .libs/libgsl.lax/libgslmatrix.a/file.o .libs/libgsl.lax/libgslmatrix.a/getset.o .libs/libgsl.lax/libgslmatrix.a/init.o .libs/libgsl.lax/libgslmatrix.a/matrix.o .libs/libgsl.lax/libgslmatrix.a/minmax.o .libs/libgsl.lax/libgslmatrix.a/oper.o .libs/libgsl.lax/libgslmatrix.a/prop.o .libs/libgsl.lax/libgslmatrix.a/rowcol.o .libs/libgsl.lax/libgslmatrix.a/submatrix.o .libs/libgsl.lax/libgslmatrix.a/swap.o .libs/libgsl.lax/libgslmatrix.a/view.o .libs/libgsl.lax/libgslvector.a/copy.o .libs/libgsl.lax/libgslvector.a/file.o .libs/libgsl.lax/libgslvector.a/init.o .libs/libgsl.lax/libgslvector.a/minmax.o .libs/libgsl.lax/libgslvector.a/oper.o .libs/libgsl.lax/libgslvector.a/prop.o .libs/libgsl.lax/libgslvector.a/reim.o .libs/libgsl.lax/libgslvector.a/subvector.o .libs/libgsl.lax/libgslvector.a/swap.o .libs/libgsl.lax/libgslvector.a/vector.o .libs/libgsl.lax/libgslvector.a/view.o .libs/libgsl.lax/libgslrng.a/borosh13.o .libs/libgsl.lax/libgslrng.a/cmrg.o .libs/libgsl.lax/libgslrng.a/coveyou.o .libs/libgsl.lax/libgslrng.a/default.o .libs/libgsl.lax/libgslrng.a/file.o .libs/libgsl.lax/libgslrng.a/fishman18.o .libs/libgsl.lax/libgslrng.a/fishman20.o .libs/libgsl.lax/libgslrng.a/fishman2x.o .libs/libgsl.lax/libgslrng.a/gfsr4.o .libs/libgsl.lax/libgslrng.a/inline.o .libs/libgsl.lax/libgslrng.a/knuthran.o .libs/libgsl.lax/libgslrng.a/knuthran2.o .libs/libgsl.lax/libgslrng.a/knuthran2002.o .libs/libgsl.lax/libgslrng.a/lecuyer21.o .libs/libgsl.lax/libgslrng.a/minstd.o .libs/libgsl.lax/libgslrng.a/mrg.o .libs/libgsl.lax/libgslrng.a/mt.o .libs/libgsl.lax/libgslrng.a/r250.o .libs/libgsl.lax/libgslrng.a/ran0.o .libs/libgsl.lax/libgslrng.a/ran1.o .libs/libgsl.lax/libgslrng.a/ran2.o .libs/libgsl.lax/libgslrng.a/ran3.o .libs/libgsl.lax/libgslrng.a/rand.o .libs/libgsl.lax/libgslrng.a/rand48.o .libs/libgsl.lax/libgslrng.a/random.o .libs/libgsl.lax/libgslrng.a/randu.o .libs/libgsl.lax/libgslrng.a/ranf.o .libs/libgsl.lax/libgslrng.a/ranlux.o .libs/libgsl.lax/libgslrng.a/ranlxd.o .libs/libgsl.lax/libgslrng.a/ranlxs.o .libs/libgsl.lax/libgslrng.a/ranmar.o .libs/libgsl.lax/libgslrng.a/rng.o .libs/libgsl.lax/libgslrng.a/slatec.o .libs/libgsl.lax/libgslrng.a/taus.o .libs/libgsl.lax/libgslrng.a/taus113.o .libs/libgsl.lax/libgslrng.a/transputer.o .libs/libgsl.lax/libgslrng.a/tt.o .libs/libgsl.lax/libgslrng.a/types.o .libs/libgsl.lax/libgslrng.a/uni.o .libs/libgsl.lax/libgslrng.a/uni32.o .libs/libgsl.lax/libgslrng.a/vax.o .libs/libgsl.lax/libgslrng.a/waterman14.o .libs/libgsl.lax/libgslrng.a/zuf.o .libs/libgsl.lax/libgslrandist.a/bernoulli.o .libs/libgsl.lax/libgslrandist.a/beta.o .libs/libgsl.lax/libgslrandist.a/bigauss.o .libs/libgsl.lax/libgslrandist.a/binomial.o .libs/libgsl.lax/libgslrandist.a/binomial_tpe.o .libs/libgsl.lax/libgslrandist.a/cauchy.o .libs/libgsl.lax/libgslrandist.a/chisq.o .libs/libgsl.lax/libgslrandist.a/dirichlet.o .libs/libgsl.lax/libgslrandist.a/discrete.o .libs/libgsl.lax/libgslrandist.a/erlang.o .libs/libgsl.lax/libgslrandist.a/exponential.o .libs/libgsl.lax/libgslrandist.a/exppow.o .libs/libgsl.lax/libgslrandist.a/fdist.o .libs/libgsl.lax/libgslrandist.a/flat.o .libs/libgsl.lax/libgslrandist.a/gamma.o .libs/libgsl.lax/libgslrandist.a/gauss.o .libs/libgsl.lax/libgslrandist.a/gausstail.o .libs/libgsl.lax/libgslrandist.a/gausszig.o .libs/libgsl.lax/libgslrandist.a/geometric.o .libs/libgsl.lax/libgslrandist.a/gumbel.o .libs/libgsl.lax/libgslrandist.a/hyperg.o .libs/libgsl.lax/libgslrandist.a/landau.o .libs/libgsl.lax/libgslrandist.a/laplace.o .libs/libgsl.lax/libgslrandist.a/levy.o .libs/libgsl.lax/libgslrandist.a/logarithmic.o .libs/libgsl.lax/libgslrandist.a/logistic.o .libs/libgsl.lax/libgslrandist.a/lognormal.o .libs/libgsl.lax/libgslrandist.a/multinomial.o .libs/libgsl.lax/libgslrandist.a/nbinomial.o .libs/libgsl.lax/libgslrandist.a/pareto.o .libs/libgsl.lax/libgslrandist.a/pascal.o .libs/libgsl.lax/libgslrandist.a/poisson.o .libs/libgsl.lax/libgslrandist.a/rayleigh.o .libs/libgsl.lax/libgslrandist.a/shuffle.o .libs/libgsl.lax/libgslrandist.a/sphere.o .libs/libgsl.lax/libgslrandist.a/tdist.o .libs/libgsl.lax/libgslrandist.a/weibull.o .libs/libgsl.lax/libgslcdf.a/beta.o .libs/libgsl.lax/libgslcdf.a/betainv.o .libs/libgsl.lax/libgslcdf.a/binomial.o .libs/libgsl.lax/libgslcdf.a/cauchy.o .libs/libgsl.lax/libgslcdf.a/cauchyinv.o .libs/libgsl.lax/libgslcdf.a/chisq.o .libs/libgsl.lax/libgslcdf.a/chisqinv.o .libs/libgsl.lax/libgslcdf.a/exponential.o .libs/libgsl.lax/libgslcdf.a/exponentialinv.o .libs/libgsl.lax/libgslcdf.a/exppow.o .libs/libgsl.lax/libgslcdf.a/fdist.o .libs/libgsl.lax/libgslcdf.a/fdistinv.o .libs/libgsl.lax/libgslcdf.a/flat.o .libs/libgsl.lax/libgslcdf.a/flatinv.o .libs/libgsl.lax/libgslcdf.a/gamma.o .libs/libgsl.lax/libgslcdf.a/gammainv.o .libs/libgsl.lax/libgslcdf.a/gauss.o .libs/libgsl.lax/libgslcdf.a/gaussinv.o .libs/libgsl.lax/libgslcdf.a/geometric.o .libs/libgsl.lax/libgslcdf.a/gumbel1.o .libs/libgsl.lax/libgslcdf.a/gumbel1inv.o .libs/libgsl.lax/libgslcdf.a/gumbel2.o .libs/libgsl.lax/libgslcdf.a/gumbel2inv.o .libs/libgsl.lax/libgslcdf.a/hypergeometric.o .libs/libgsl.lax/libgslcdf.a/laplace.o .libs/libgsl.lax/libgslcdf.a/laplaceinv.o .libs/libgsl.lax/libgslcdf.a/logistic.o .libs/libgsl.lax/libgslcdf.a/logisticinv.o .libs/libgsl.lax/libgslcdf.a/lognormal.o .libs/libgsl.lax/libgslcdf.a/lognormalinv.o .libs/libgsl.lax/libgslcdf.a/nbinomial.o .libs/libgsl.lax/libgslcdf.a/pareto.o .libs/libgsl.lax/libgslcdf.a/paretoinv.o .libs/libgsl.lax/libgslcdf.a/pascal.o .libs/libgsl.lax/libgslcdf.a/poisson.o .libs/libgsl.lax/libgslcdf.a/rayleigh.o .libs/libgsl.lax/libgslcdf.a/rayleighinv.o .libs/libgsl.lax/libgslcdf.a/tdist.o .libs/libgsl.lax/libgslcdf.a/tdistinv.o .libs/libgsl.lax/libgslcdf.a/weibull.o .libs/libgsl.lax/libgslcdf.a/weibullinv.o .libs/libgsl.lax/libgslspecfunc.a/airy.o .libs/libgsl.lax/libgslspecfunc.a/airy_der.o .libs/libgsl.lax/libgslspecfunc.a/airy_zero.o .libs/libgsl.lax/libgslspecfunc.a/atanint.o .libs/libgsl.lax/libgslspecfunc.a/bessel.o .libs/libgsl.lax/libgslspecfunc.a/bessel_amp_phase.o .libs/libgsl.lax/libgslspecfunc.a/bessel_i.o .libs/libgsl.lax/libgslspecfunc.a/bessel_I0.o .libs/libgsl.lax/libgslspecfunc.a/bessel_I1.o .libs/libgsl.lax/libgslspecfunc.a/bessel_In.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Inu.o .libs/libgsl.lax/libgslspecfunc.a/bessel_j.o .libs/libgsl.lax/libgslspecfunc.a/bessel_J0.o .libs/libgsl.lax/libgslspecfunc.a/bessel_J1.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Jn.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Jnu.o .libs/libgsl.lax/libgslspecfunc.a/bessel_k.o .libs/libgsl.lax/libgslspecfunc.a/bessel_K0.o .libs/libgsl.lax/libgslspecfunc.a/bessel_K1.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Kn.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Knu.o .libs/libgsl.lax/libgslspecfunc.a/bessel_olver.o .libs/libgsl.lax/libgslspecfunc.a/bessel_sequence.o .libs/libgsl.lax/libgslspecfunc.a/bessel_temme.o .libs/libgsl.lax/libgslspecfunc.a/bessel_y.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Y0.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Y1.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Yn.o .libs/libgsl.lax/libgslspecfunc.a/bessel_Ynu.o .libs/libgsl.lax/libgslspecfunc.a/bessel_zero.o .libs/libgsl.lax/libgslspecfunc.a/beta.o .libs/libgsl.lax/libgslspecfunc.a/beta_inc.o .libs/libgsl.lax/libgslspecfunc.a/clausen.o .libs/libgsl.lax/libgslspecfunc.a/coulomb.o .libs/libgsl.lax/libgslspecfunc.a/coulomb_bound.o .libs/libgsl.lax/libgslspecfunc.a/coupling.o .libs/libgsl.lax/libgslspecfunc.a/dawson.o .libs/libgsl.lax/libgslspecfunc.a/debye.o .libs/libgsl.lax/libgslspecfunc.a/dilog.o .libs/libgsl.lax/libgslspecfunc.a/elementary.o .libs/libgsl.lax/libgslspecfunc.a/ellint.o .libs/libgsl.lax/libgslspecfunc.a/elljac.o .libs/libgsl.lax/libgslspecfunc.a/erfc.o .libs/libgsl.lax/libgslspecfunc.a/exp.o .libs/libgsl.lax/libgslspecfunc.a/expint.o .libs/libgsl.lax/libgslspecfunc.a/expint3.o .libs/libgsl.lax/libgslspecfunc.a/fermi_dirac.o .libs/libgsl.lax/libgslspecfunc.a/gamma.o .libs/libgsl.lax/libgslspecfunc.a/gamma_inc.o .libs/libgsl.lax/libgslspecfunc.a/gegenbauer.o .libs/libgsl.lax/libgslspecfunc.a/hyperg.o .libs/libgsl.lax/libgslspecfunc.a/hyperg_0F1.o .libs/libgsl.lax/libgslspecfunc.a/hyperg_1F1.o .libs/libgsl.lax/libgslspecfunc.a/hyperg_2F0.o .libs/libgsl.lax/libgslspecfunc.a/hyperg_2F1.o .libs/libgsl.lax/libgslspecfunc.a/hyperg_U.o .libs/libgsl.lax/libgslspecfunc.a/laguerre.o .libs/libgsl.lax/libgslspecfunc.a/lambert.o .libs/libgsl.lax/libgslspecfunc.a/legendre_con.o .libs/libgsl.lax/libgslspecfunc.a/legendre_H3d.o .libs/libgsl.lax/libgslspecfunc.a/legendre_poly.o .libs/libgsl.lax/libgslspecfunc.a/legendre_Qn.o .libs/libgsl.lax/libgslspecfunc.a/log.o .libs/libgsl.lax/libgslspecfunc.a/mathieu_angfunc.o .libs/libgsl.lax/libgslspecfunc.a/mathieu_charv.o .libs/libgsl.lax/libgslspecfunc.a/mathieu_coeff.o .libs/libgsl.lax/libgslspecfunc.a/mathieu_radfunc.o .libs/libgsl.lax/libgslspecfunc.a/mathieu_workspace.o .libs/libgsl.lax/libgslspecfunc.a/poch.o .libs/libgsl.lax/libgslspecfunc.a/pow_int.o .libs/libgsl.lax/libgslspecfunc.a/psi.o .libs/libgsl.lax/libgslspecfunc.a/result.o .libs/libgsl.lax/libgslspecfunc.a/shint.o .libs/libgsl.lax/libgslspecfunc.a/sinint.o .libs/libgsl.lax/libgslspecfunc.a/synchrotron.o .libs/libgsl.lax/libgslspecfunc.a/transport.o .libs/libgsl.lax/libgslspecfunc.a/trig.o .libs/libgsl.lax/libgslspecfunc.a/zeta.o .libs/libgsl.lax/libgsllinalg.a/balance.o .libs/libgsl.lax/libgsllinalg.a/balancemat.o .libs/libgsl.lax/libgsllinalg.a/bidiag.o .libs/libgsl.lax/libgsllinalg.a/cholesky.o .libs/libgsl.lax/libgsllinalg.a/choleskyc.o .libs/libgsl.lax/libgsllinalg.a/exponential.o .libs/libgsl.lax/libgsllinalg.a/hermtd.o .libs/libgsl.lax/libgsllinalg.a/hessenberg.o .libs/libgsl.lax/libgsllinalg.a/hesstri.o .libs/libgsl.lax/libgsllinalg.a/hh.o .libs/libgsl.lax/libgsllinalg.a/householder.o .libs/libgsl.lax/libgsllinalg.a/householdercomplex.o .libs/libgsl.lax/libgsllinalg.a/lq.o .libs/libgsl.lax/libgsllinalg.a/lu.o .libs/libgsl.lax/libgsllinalg.a/luc.o .libs/libgsl.lax/libgsllinalg.a/multiply.o .libs/libgsl.lax/libgsllinalg.a/ptlq.o .libs/libgsl.lax/libgsllinalg.a/qr.o .libs/libgsl.lax/libgsllinalg.a/qrpt.o .libs/libgsl.lax/libgsllinalg.a/svd.o .libs/libgsl.lax/libgsllinalg.a/symmtd.o .libs/libgsl.lax/libgsllinalg.a/tridiag.o .libs/libgsl.lax/libgslstatistics.a/absdev.o .libs/libgsl.lax/libgslstatistics.a/covariance.o .libs/libgsl.lax/libgslstatistics.a/kurtosis.o .libs/libgsl.lax/libgslstatistics.a/lag1.o .libs/libgsl.lax/libgslstatistics.a/mean.o .libs/libgsl.lax/libgslstatistics.a/median.o .libs/libgsl.lax/libgslstatistics.a/minmax.o .libs/libgsl.lax/libgslstatistics.a/p_variance.o .libs/libgsl.lax/libgslstatistics.a/quantiles.o .libs/libgsl.lax/libgslstatistics.a/skew.o .libs/libgsl.lax/libgslstatistics.a/ttest.o .libs/libgsl.lax/libgslstatistics.a/variance.o .libs/libgsl.lax/libgslstatistics.a/wabsdev.o .libs/libgsl.lax/libgslstatistics.a/wkurtosis.o .libs/libgsl.lax/libgslstatistics.a/wmean.o .libs/libgsl.lax/libgslstatistics.a/wskew.o .libs/libgsl.lax/libgslstatistics.a/wvariance.o .libs/libgsl.lax/libgslblas.a/blas.o .libs/libgsl.lax/libgslroots.a/bisection.o .libs/libgsl.lax/libgslroots.a/brent.o .libs/libgsl.lax/libgslroots.a/convergence.o .libs/libgsl.lax/libgslroots.a/falsepos.o .libs/libgsl.lax/libgslroots.a/fdfsolver.o .libs/libgsl.lax/libgslroots.a/fsolver.o .libs/libgsl.lax/libgslroots.a/newton.o .libs/libgsl.lax/libgslroots.a/secant.o .libs/libgsl.lax/libgslroots.a/steffenson.o .libs/libgsl.lax/libgslerr.a/error.o .libs/libgsl.lax/libgslerr.a/message.o .libs/libgsl.lax/libgslerr.a/stream.o .libs/libgsl.lax/libgslerr.a/strerror.o .libs/libgsl.lax/libgslmin.a/bracketing.o .libs/libgsl.lax/libgslmin.a/brent.o .libs/libgsl.lax/libgslmin.a/convergence.o .libs/libgsl.lax/libgslmin.a/fsolver.o .libs/libgsl.lax/libgslmin.a/golden.o .libs/libgsl.lax/libgslmin.a/quad_golden.o .libs/libgsl.lax/libgslpermutation.a/canonical.o .libs/libgsl.lax/libgslpermutation.a/file.o .libs/libgsl.lax/libgslpermutation.a/init.o .libs/libgsl.lax/libgslpermutation.a/inline.o .libs/libgsl.lax/libgslpermutation.a/permutation.o .libs/libgsl.lax/libgslpermutation.a/permute.o .libs/libgsl.lax/libgslcomplex.a/inline.o .libs/libgsl.lax/libgslcomplex.a/math.o .libs/libgsl.lax/libgslsys.a/coerce.o .libs/libgsl.lax/libgslsys.a/expm1.o .libs/libgsl.lax/libgslsys.a/fcmp.o .libs/libgsl.lax/libgslsys.a/fdiv.o .libs/libgsl.lax/libgslsys.a/hypot.o .libs/libgsl.lax/libgslsys.a/infnan.o .libs/libgsl.lax/libgslsys.a/invhyp.o .libs/libgsl.lax/libgslsys.a/ldfrexp.o .libs/libgsl.lax/libgslsys.a/log1p.o .libs/libgsl.lax/libgslsys.a/minmax.o .libs/libgsl.lax/libgslsys.a/pow_int.o .libs/libgsl.lax/libgslsys.a/prec.o .libs/libgsl.lax/libgsleigen.a/francis.o .libs/libgsl.lax/libgsleigen.a/gen.o .libs/libgsl.lax/libgsleigen.a/genherm.o .libs/libgsl.lax/libgsleigen.a/genhermv.o .libs/libgsl.lax/libgsleigen.a/gensymm.o .libs/libgsl.lax/libgsleigen.a/gensymmv.o .libs/libgsl.lax/libgsleigen.a/genv.o .libs/libgsl.lax/libgsleigen.a/herm.o .libs/libgsl.lax/libgsleigen.a/hermv.o .libs/libgsl.lax/libgsleigen.a/jacobi.o .libs/libgsl.lax/libgsleigen.a/nonsymm.o .libs/libgsl.lax/libgsleigen.a/nonsymmv.o .libs/libgsl.lax/libgsleigen.a/schur.o .libs/libgsl.lax/libgsleigen.a/sort.o .libs/libgsl.lax/libgsleigen.a/symm.o .libs/libgsl.lax/libgsleigen.a/symmv.o -L/usr/local/lib cblas/.libs/libgslcblas.dylib -lm -arch x86_64 -mtune=core2 -install_name /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgsl.0.dylib -compatibility_version 15 -current_version 15.0 -Wl,-single_module
libtool: link: dsymutil .libs/libgsl.0.dylib || :
libtool: link: (cd ".libs" && rm -f "libgsl.dylib" && ln -s "libgsl.0.dylib" "libgsl.dylib")
libtool: link: rm -fr .libs/libgsl.lax
libtool: link: ( cd ".libs" && rm -f "libgsl.la" && ln -s "../libgsl.la" "libgsl.la" )
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -DHAVE_CONFIG_H -I. -I/usr/local/include -mtune=core2 -g -O2 -Wall -c gsl-randist.c
/bin/sh ./libtool --tag=CC --mode=link llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -L/usr/local/lib -L/usr/local/lib -o gsl-randist gsl-randist.o libgsl.la cblas/libgslcblas.la -lm
libtool: link: llvm-gcc-4.2 -arch x86_64 -std=gnu99 -mtune=core2 -g -O2 -Wall -o .libs/gsl-randist gsl-randist.o -L/usr/local/lib ./.libs/libgsl.dylib /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gsl-1.13/cblas/.libs/libgslcblas.dylib cblas/.libs/libgslcblas.dylib -lm
creating gsl-config
creating gsl.pc
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib"
/bin/sh ./libtool --mode=install /usr/bin/install -c libgsl.la '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib'
libtool: install: /usr/bin/install -c .libs/libgsl.0.dylib /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgsl.0.dylib
libtool: install: (cd /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib && { ln -s -f libgsl.0.dylib libgsl.dylib || { rm -f libgsl.dylib && ln -s libgsl.0.dylib libgsl.dylib; }; })
libtool: install: /usr/bin/install -c .libs/libgsl.lai /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/libgsl.la
----------------------------------------------------------------------
Libraries have been installed in:
/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib
If you ever happen to want to link against installed libraries
in a given directory, LIBDIR, you must either use libtool, and
specify the full pathname of the library, or use the `-LLIBDIR'
flag during linking and do at least one of the following:
- add LIBDIR to the `DYLD_LIBRARY_PATH' environment variable
during execution
See any operating system documentation about shared libraries for
more information, such as the ld(1) and ld.so(8) manual pages.
----------------------------------------------------------------------
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin"
/bin/sh ./libtool --mode=install /usr/bin/install -c gsl-randist '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin'
libtool: install: /usr/bin/install -c .libs/gsl-randist /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin/gsl-randist
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin"
/usr/bin/install -c gsl-config '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/bin'
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/share/aclocal" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/share/aclocal"
/usr/bin/install -c -m 644 gsl.m4 '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/share/aclocal'
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/pkgconfig" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/pkgconfig"
/usr/bin/install -c -m 644 gsl.pc '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/lib/pkgconfig'
test -z "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl" || ./install-sh -c -d "/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl"
/usr/bin/install -c -m 644 gsl_math.h gsl_pow_int.h gsl_nan.h gsl_machine.h gsl_mode.h gsl_precision.h gsl_types.h gsl_version.h gsl_minmax.h gsl_inline.h '/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include/gsl'
configure: Using the following compilation and linking flags for flowClust
configure: PKG_CFLAGS= -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include
configure: PKG_LIBS=
configure: FLOWCLUST_DEFS=-DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC
configure: Compiling using GSL version: '1.13.0'.
configure: Using bundled GSL: 'yes'.
configure: creating ./config.status
config.status: creating src/Makevars
** libs
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c BoxCox.c -o BoxCox.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c BoxCoxPriors.c -o BoxCoxPriors.o
BoxCoxPriors.c: In function ‘BoxCoxGradientPriors’:
BoxCoxPriors.c:57: warning: unused variable ‘rowZ’
BoxCoxPriors.c:33: warning: unused variable ‘kappa0’
BoxCoxPriors.c:32: warning: unused variable ‘itersolve’
BoxCoxPriors.c:31: warning: unused variable ‘iter’
BoxCoxPriors.c:28: warning: unused variable ‘model’
BoxCoxPriors.c:23: warning: unused variable ‘SumZlogY’
BoxCoxPriors.c:15: warning: unused variable ‘Precision’
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c Nu.c -o Nu.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c flowClust.c -o flowClust.o
flowClust.c: In function ‘flowClust’:
flowClust.c:48: warning: unused variable ‘matrixZUY2’
flowClust.c:46: warning: unused variable ‘subRowZUY2’
flowClust.c:46: warning: unused variable ‘rowZUY2’
flowClust.c: In function ‘ECMUpdateSigmaG2’:
flowClust.c:1111: warning: unused variable ‘i’
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c flowClustGaussian.c -o flowClustGaussian.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I/Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/00_pkg_src/flowClust/src/gslbuild/include -DGSL_MAJOR=1 -DGSL_MINOR=13 -DGSL_STATIC -fPIC -mtune=core2 -g -O2 -Wall -c ranMVNT.c -o ranMVNT.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -L/usr/local/lib -o flowClust.so BoxCox.o BoxCoxPriors.o Nu.o flowClust.o flowClustGaussian.o ranMVNT.o gsl-1.13/blas/.libs/blas.o gsl-1.13/block/.libs/block.o gsl-1.13/block/.libs/file.o gsl-1.13/block/.libs/init.o gsl-1.13/cblas/.libs/caxpy.o gsl-1.13/cblas/.libs/ccopy.o gsl-1.13/cblas/.libs/cdotc_sub.o gsl-1.13/cblas/.libs/cdotu_sub.o gsl-1.13/cblas/.libs/cgbmv.o gsl-1.13/cblas/.libs/cgemm.o gsl-1.13/cblas/.libs/cgemv.o gsl-1.13/cblas/.libs/cgerc.o gsl-1.13/cblas/.libs/cgeru.o gsl-1.13/cblas/.libs/chbmv.o gsl-1.13/cblas/.libs/chemm.o gsl-1.13/cblas/.libs/chemv.o gsl-1.13/cblas/.libs/cher.o gsl-1.13/cblas/.libs/cher2.o gsl-1.13/cblas/.libs/cher2k.o gsl-1.13/cblas/.libs/cherk.o gsl-1.13/cblas/.libs/chpmv.o gsl-1.13/cblas/.libs/chpr.o gsl-1.13/cblas/.libs/chpr2.o gsl-1.13/cblas/.libs/cscal.o gsl-1.13/cblas/.libs/csscal.o gsl-1.13/cblas/.libs/cswap.o gsl-1.13/cblas/.libs/csymm.o gsl-1.13/cblas/.libs/csyr2k.o gsl-1.13/cblas/.libs/csyrk.o gsl-1.13/cblas/.libs/ctbmv.o gsl-1.13/cblas/.libs/ctbsv.o gsl-1.13/cblas/.libs/ctpmv.o gsl-1.13/cblas/.libs/ctpsv.o gsl-1.13/cblas/.libs/ctrmm.o gsl-1.13/cblas/.libs/ctrmv.o gsl-1.13/cblas/.libs/ctrsm.o gsl-1.13/cblas/.libs/ctrsv.o gsl-1.13/cblas/.libs/dasum.o gsl-1.13/cblas/.libs/daxpy.o gsl-1.13/cblas/.libs/dcopy.o gsl-1.13/cblas/.libs/ddot.o gsl-1.13/cblas/.libs/dgbmv.o gsl-1.13/cblas/.libs/dgemm.o gsl-1.13/cblas/.libs/dgemv.o gsl-1.13/cblas/.libs/dger.o gsl-1.13/cblas/.libs/dnrm2.o gsl-1.13/cblas/.libs/drot.o gsl-1.13/cblas/.libs/drotg.o gsl-1.13/cblas/.libs/drotm.o gsl-1.13/cblas/.libs/drotmg.o gsl-1.13/cblas/.libs/dsbmv.o gsl-1.13/cblas/.libs/dscal.o gsl-1.13/cblas/.libs/dsdot.o gsl-1.13/cblas/.libs/dspmv.o gsl-1.13/cblas/.libs/dspr.o gsl-1.13/cblas/.libs/dspr2.o gsl-1.13/cblas/.libs/dswap.o gsl-1.13/cblas/.libs/dsymm.o gsl-1.13/cblas/.libs/dsymv.o gsl-1.13/cblas/.libs/dsyr.o gsl-1.13/cblas/.libs/dsyr2.o gsl-1.13/cblas/.libs/dsyr2k.o gsl-1.13/cblas/.libs/dsyrk.o gsl-1.13/cblas/.libs/dtbmv.o gsl-1.13/cblas/.libs/dtbsv.o gsl-1.13/cblas/.libs/dtpmv.o gsl-1.13/cblas/.libs/dtpsv.o gsl-1.13/cblas/.libs/dtrmm.o gsl-1.13/cblas/.libs/dtrmv.o gsl-1.13/cblas/.libs/dtrsm.o gsl-1.13/cblas/.libs/dtrsv.o gsl-1.13/cblas/.libs/dzasum.o gsl-1.13/cblas/.libs/dznrm2.o gsl-1.13/cblas/.libs/icamax.o gsl-1.13/cblas/.libs/idamax.o gsl-1.13/cblas/.libs/isamax.o gsl-1.13/cblas/.libs/izamax.o gsl-1.13/cblas/.libs/sasum.o gsl-1.13/cblas/.libs/saxpy.o gsl-1.13/cblas/.libs/scasum.o gsl-1.13/cblas/.libs/scnrm2.o gsl-1.13/cblas/.libs/scopy.o gsl-1.13/cblas/.libs/sdot.o gsl-1.13/cblas/.libs/sdsdot.o gsl-1.13/cblas/.libs/sgbmv.o gsl-1.13/cblas/.libs/sgemm.o gsl-1.13/cblas/.libs/sgemv.o gsl-1.13/cblas/.libs/sger.o gsl-1.13/cblas/.libs/snrm2.o gsl-1.13/cblas/.libs/srot.o gsl-1.13/cblas/.libs/srotg.o gsl-1.13/cblas/.libs/srotm.o gsl-1.13/cblas/.libs/srotmg.o gsl-1.13/cblas/.libs/ssbmv.o gsl-1.13/cblas/.libs/sscal.o gsl-1.13/cblas/.libs/sspmv.o gsl-1.13/cblas/.libs/sspr.o gsl-1.13/cblas/.libs/sspr2.o gsl-1.13/cblas/.libs/sswap.o gsl-1.13/cblas/.libs/ssymm.o gsl-1.13/cblas/.libs/ssymv.o gsl-1.13/cblas/.libs/ssyr.o gsl-1.13/cblas/.libs/ssyr2.o gsl-1.13/cblas/.libs/ssyr2k.o gsl-1.13/cblas/.libs/ssyrk.o gsl-1.13/cblas/.libs/stbmv.o gsl-1.13/cblas/.libs/stbsv.o gsl-1.13/cblas/.libs/stpmv.o gsl-1.13/cblas/.libs/stpsv.o gsl-1.13/cblas/.libs/strmm.o gsl-1.13/cblas/.libs/strmv.o gsl-1.13/cblas/.libs/strsm.o gsl-1.13/cblas/.libs/strsv.o gsl-1.13/cblas/.libs/xerbla.o gsl-1.13/cblas/.libs/zaxpy.o gsl-1.13/cblas/.libs/zcopy.o gsl-1.13/cblas/.libs/zdotc_sub.o gsl-1.13/cblas/.libs/zdotu_sub.o gsl-1.13/cblas/.libs/zdscal.o gsl-1.13/cblas/.libs/zgbmv.o gsl-1.13/cblas/.libs/zgemm.o gsl-1.13/cblas/.libs/zgemv.o gsl-1.13/cblas/.libs/zgerc.o gsl-1.13/cblas/.libs/zgeru.o gsl-1.13/cblas/.libs/zhbmv.o gsl-1.13/cblas/.libs/zhemm.o gsl-1.13/cblas/.libs/zhemv.o gsl-1.13/cblas/.libs/zher.o gsl-1.13/cblas/.libs/zher2.o gsl-1.13/cblas/.libs/zher2k.o gsl-1.13/cblas/.libs/zherk.o gsl-1.13/cblas/.libs/zhpmv.o gsl-1.13/cblas/.libs/zhpr.o gsl-1.13/cblas/.libs/zhpr2.o gsl-1.13/cblas/.libs/zscal.o gsl-1.13/cblas/.libs/zswap.o gsl-1.13/cblas/.libs/zsymm.o gsl-1.13/cblas/.libs/zsyr2k.o gsl-1.13/cblas/.libs/zsyrk.o gsl-1.13/cblas/.libs/ztbmv.o gsl-1.13/cblas/.libs/ztbsv.o gsl-1.13/cblas/.libs/ztpmv.o gsl-1.13/cblas/.libs/ztpsv.o gsl-1.13/cblas/.libs/ztrmm.o gsl-1.13/cblas/.libs/ztrmv.o gsl-1.13/cblas/.libs/ztrsm.o gsl-1.13/cblas/.libs/ztrsv.o gsl-1.13/cdf/.libs/beta.o gsl-1.13/cdf/.libs/betainv.o gsl-1.13/cdf/.libs/binomial.o gsl-1.13/cdf/.libs/cauchy.o gsl-1.13/cdf/.libs/cauchyinv.o gsl-1.13/cdf/.libs/chisq.o gsl-1.13/cdf/.libs/chisqinv.o gsl-1.13/cdf/.libs/exponential.o gsl-1.13/cdf/.libs/exponentialinv.o gsl-1.13/cdf/.libs/exppow.o gsl-1.13/cdf/.libs/fdist.o gsl-1.13/cdf/.libs/fdistinv.o gsl-1.13/cdf/.libs/flat.o gsl-1.13/cdf/.libs/flatinv.o gsl-1.13/cdf/.libs/gamma.o gsl-1.13/cdf/.libs/gammainv.o gsl-1.13/cdf/.libs/gauss.o gsl-1.13/cdf/.libs/gaussinv.o gsl-1.13/cdf/.libs/geometric.o gsl-1.13/cdf/.libs/gumbel1.o gsl-1.13/cdf/.libs/gumbel1inv.o gsl-1.13/cdf/.libs/gumbel2.o gsl-1.13/cdf/.libs/gumbel2inv.o gsl-1.13/cdf/.libs/hypergeometric.o gsl-1.13/cdf/.libs/laplace.o gsl-1.13/cdf/.libs/laplaceinv.o gsl-1.13/cdf/.libs/logistic.o gsl-1.13/cdf/.libs/logisticinv.o gsl-1.13/cdf/.libs/lognormal.o gsl-1.13/cdf/.libs/lognormalinv.o gsl-1.13/cdf/.libs/nbinomial.o gsl-1.13/cdf/.libs/pareto.o gsl-1.13/cdf/.libs/paretoinv.o gsl-1.13/cdf/.libs/pascal.o gsl-1.13/cdf/.libs/poisson.o gsl-1.13/cdf/.libs/rayleigh.o gsl-1.13/cdf/.libs/rayleighinv.o gsl-1.13/cdf/.libs/tdist.o gsl-1.13/cdf/.libs/tdistinv.o gsl-1.13/cdf/.libs/weibull.o gsl-1.13/cdf/.libs/weibullinv.o gsl-1.13/complex/.libs/inline.o gsl-1.13/complex/.libs/math.o gsl-1.13/eigen/.libs/francis.o gsl-1.13/eigen/.libs/gen.o gsl-1.13/eigen/.libs/genherm.o gsl-1.13/eigen/.libs/genhermv.o gsl-1.13/eigen/.libs/gensymm.o gsl-1.13/eigen/.libs/gensymmv.o gsl-1.13/eigen/.libs/genv.o gsl-1.13/eigen/.libs/herm.o gsl-1.13/eigen/.libs/hermv.o gsl-1.13/eigen/.libs/jacobi.o gsl-1.13/eigen/.libs/nonsymm.o gsl-1.13/eigen/.libs/nonsymmv.o gsl-1.13/eigen/.libs/schur.o gsl-1.13/eigen/.libs/sort.o gsl-1.13/eigen/.libs/symm.o gsl-1.13/eigen/.libs/symmv.o gsl-1.13/err/.libs/error.o gsl-1.13/err/.libs/message.o gsl-1.13/err/.libs/stream.o gsl-1.13/err/.libs/strerror.o gsl-1.13/linalg/.libs/balance.o gsl-1.13/linalg/.libs/balancemat.o gsl-1.13/linalg/.libs/bidiag.o gsl-1.13/linalg/.libs/cholesky.o gsl-1.13/linalg/.libs/choleskyc.o gsl-1.13/linalg/.libs/exponential.o gsl-1.13/linalg/.libs/hermtd.o gsl-1.13/linalg/.libs/hessenberg.o gsl-1.13/linalg/.libs/hesstri.o gsl-1.13/linalg/.libs/hh.o gsl-1.13/linalg/.libs/householder.o gsl-1.13/linalg/.libs/householdercomplex.o gsl-1.13/linalg/.libs/lq.o gsl-1.13/linalg/.libs/lu.o gsl-1.13/linalg/.libs/luc.o gsl-1.13/linalg/.libs/multiply.o gsl-1.13/linalg/.libs/ptlq.o gsl-1.13/linalg/.libs/qr.o gsl-1.13/linalg/.libs/qrpt.o gsl-1.13/linalg/.libs/svd.o gsl-1.13/linalg/.libs/symmtd.o gsl-1.13/linalg/.libs/tridiag.o gsl-1.13/matrix/.libs/copy.o gsl-1.13/matrix/.libs/file.o gsl-1.13/matrix/.libs/getset.o gsl-1.13/matrix/.libs/init.o gsl-1.13/matrix/.libs/matrix.o gsl-1.13/matrix/.libs/minmax.o gsl-1.13/matrix/.libs/oper.o gsl-1.13/matrix/.libs/prop.o gsl-1.13/matrix/.libs/rowcol.o gsl-1.13/matrix/.libs/submatrix.o gsl-1.13/matrix/.libs/swap.o gsl-1.13/matrix/.libs/view.o gsl-1.13/min/.libs/bracketing.o gsl-1.13/min/.libs/brent.o gsl-1.13/min/.libs/convergence.o gsl-1.13/min/.libs/fsolver.o gsl-1.13/min/.libs/golden.o gsl-1.13/min/.libs/quad_golden.o gsl-1.13/permutation/.libs/canonical.o gsl-1.13/permutation/.libs/file.o gsl-1.13/permutation/.libs/init.o gsl-1.13/permutation/.libs/inline.o gsl-1.13/permutation/.libs/permutation.o gsl-1.13/permutation/.libs/permute.o 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gsl-1.13/specfunc/.libs/bessel_Inu.o gsl-1.13/specfunc/.libs/bessel_J0.o gsl-1.13/specfunc/.libs/bessel_J1.o gsl-1.13/specfunc/.libs/bessel_Jn.o gsl-1.13/specfunc/.libs/bessel_Jnu.o gsl-1.13/specfunc/.libs/bessel_K0.o gsl-1.13/specfunc/.libs/bessel_K1.o gsl-1.13/specfunc/.libs/bessel_Kn.o gsl-1.13/specfunc/.libs/bessel_Knu.o gsl-1.13/specfunc/.libs/bessel_Y0.o gsl-1.13/specfunc/.libs/bessel_Y1.o gsl-1.13/specfunc/.libs/bessel_Yn.o gsl-1.13/specfunc/.libs/bessel_Ynu.o gsl-1.13/specfunc/.libs/bessel_amp_phase.o gsl-1.13/specfunc/.libs/bessel_i.o gsl-1.13/specfunc/.libs/bessel_j.o gsl-1.13/specfunc/.libs/bessel_k.o gsl-1.13/specfunc/.libs/bessel_olver.o gsl-1.13/specfunc/.libs/bessel_sequence.o gsl-1.13/specfunc/.libs/bessel_temme.o gsl-1.13/specfunc/.libs/bessel_y.o gsl-1.13/specfunc/.libs/bessel_zero.o gsl-1.13/specfunc/.libs/beta.o gsl-1.13/specfunc/.libs/beta_inc.o gsl-1.13/specfunc/.libs/clausen.o gsl-1.13/specfunc/.libs/coulomb.o gsl-1.13/specfunc/.libs/coulomb_bound.o gsl-1.13/specfunc/.libs/coupling.o gsl-1.13/specfunc/.libs/dawson.o gsl-1.13/specfunc/.libs/debye.o gsl-1.13/specfunc/.libs/dilog.o gsl-1.13/specfunc/.libs/elementary.o gsl-1.13/specfunc/.libs/ellint.o gsl-1.13/specfunc/.libs/elljac.o gsl-1.13/specfunc/.libs/erfc.o gsl-1.13/specfunc/.libs/exp.o gsl-1.13/specfunc/.libs/expint.o gsl-1.13/specfunc/.libs/expint3.o gsl-1.13/specfunc/.libs/fermi_dirac.o gsl-1.13/specfunc/.libs/gamma.o gsl-1.13/specfunc/.libs/gamma_inc.o gsl-1.13/specfunc/.libs/gegenbauer.o gsl-1.13/specfunc/.libs/hyperg.o gsl-1.13/specfunc/.libs/hyperg_0F1.o gsl-1.13/specfunc/.libs/hyperg_1F1.o gsl-1.13/specfunc/.libs/hyperg_2F0.o gsl-1.13/specfunc/.libs/hyperg_2F1.o gsl-1.13/specfunc/.libs/hyperg_U.o gsl-1.13/specfunc/.libs/laguerre.o gsl-1.13/specfunc/.libs/lambert.o gsl-1.13/specfunc/.libs/legendre_H3d.o gsl-1.13/specfunc/.libs/legendre_Qn.o gsl-1.13/specfunc/.libs/legendre_con.o gsl-1.13/specfunc/.libs/legendre_poly.o gsl-1.13/specfunc/.libs/log.o gsl-1.13/specfunc/.libs/mathieu_angfunc.o gsl-1.13/specfunc/.libs/mathieu_charv.o gsl-1.13/specfunc/.libs/mathieu_coeff.o gsl-1.13/specfunc/.libs/mathieu_radfunc.o gsl-1.13/specfunc/.libs/mathieu_workspace.o gsl-1.13/specfunc/.libs/poch.o gsl-1.13/specfunc/.libs/pow_int.o gsl-1.13/specfunc/.libs/psi.o gsl-1.13/specfunc/.libs/result.o gsl-1.13/specfunc/.libs/shint.o gsl-1.13/specfunc/.libs/sinint.o gsl-1.13/specfunc/.libs/synchrotron.o gsl-1.13/specfunc/.libs/transport.o gsl-1.13/specfunc/.libs/trig.o gsl-1.13/specfunc/.libs/zeta.o gsl-1.13/statistics/.libs/absdev.o gsl-1.13/statistics/.libs/covariance.o gsl-1.13/statistics/.libs/kurtosis.o gsl-1.13/statistics/.libs/lag1.o gsl-1.13/statistics/.libs/mean.o gsl-1.13/statistics/.libs/median.o gsl-1.13/statistics/.libs/minmax.o gsl-1.13/statistics/.libs/p_variance.o gsl-1.13/statistics/.libs/quantiles.o gsl-1.13/statistics/.libs/skew.o gsl-1.13/statistics/.libs/ttest.o gsl-1.13/statistics/.libs/variance.o gsl-1.13/statistics/.libs/wabsdev.o gsl-1.13/statistics/.libs/wkurtosis.o gsl-1.13/statistics/.libs/wmean.o gsl-1.13/statistics/.libs/wskew.o gsl-1.13/statistics/.libs/wvariance.o gsl-1.13/sys/.libs/coerce.o gsl-1.13/sys/.libs/expm1.o gsl-1.13/sys/.libs/fcmp.o gsl-1.13/sys/.libs/fdiv.o gsl-1.13/sys/.libs/hypot.o gsl-1.13/sys/.libs/infnan.o gsl-1.13/sys/.libs/invhyp.o gsl-1.13/sys/.libs/ldfrexp.o gsl-1.13/sys/.libs/log1p.o gsl-1.13/sys/.libs/minmax.o gsl-1.13/sys/.libs/pow_int.o gsl-1.13/sys/.libs/prec.o gsl-1.13/vector/.libs/copy.o gsl-1.13/vector/.libs/file.o gsl-1.13/vector/.libs/init.o gsl-1.13/vector/.libs/minmax.o gsl-1.13/vector/.libs/oper.o gsl-1.13/vector/.libs/prop.o gsl-1.13/vector/.libs/reim.o gsl-1.13/vector/.libs/subvector.o gsl-1.13/vector/.libs/swap.o gsl-1.13/vector/.libs/vector.o gsl-1.13/vector/.libs/view.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.2-bioc/meat/flowClust.Rcheck/flowClust/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (flowClust)