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BioC 3.2: BUILD report for epivizr on zin1

This page was generated on 2016-04-23 10:13:24 -0700 (Sat, 23 Apr 2016).

Package 323/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epivizr 1.8.1
Hector Corrada Bravo
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/epivizr
Last Changed Rev: 112146 / Revision: 116712
Last Changed Date: 2016-01-04 12:41:44 -0800 (Mon, 04 Jan 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded [ OK ] OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: epivizr
Version: 1.8.1
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epivizr
StartedAt: 2016-04-22 20:05:10 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 20:06:03 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 52.5 seconds
RetCode: 0
Status:  OK 
PackageFile: epivizr_1.8.1.tar.gz
PackageFileSize: 1.407 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data epivizr
###
##############################################################################
##############################################################################


* checking for file ‘epivizr/DESCRIPTION’ ... OK
* preparing ‘epivizr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory ‘epivizr/inst/www/css/DataTables-1.9.4/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/css/DataTables-1.9.4/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/css/dropdown-check-list-1.4/css’ is empty
WARNING: directory ‘epivizr/inst/www/css/dynatree1.2.4/skin’ is empty
WARNING: directory ‘epivizr/inst/www/css/dynatree1.2.4/skin-vista’ is empty
WARNING: directory ‘epivizr/inst/www/css/farbtastic-color-picker’ is empty
WARNING: directory ‘epivizr/inst/www/css/theme/images’ is empty
WARNING: directory ‘epivizr/inst/www/image_sources’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/data’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/datatypes/deprecated’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/events’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/measurements’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/plugins/charts’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/ui/charts’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/ui/controls’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/utils’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz/workspaces’ is empty
WARNING: directory ‘epivizr/inst/www/src/epiviz-test/performance/testcases’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/closure/goog/structs’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/d3’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/expression-parser’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/file-saver’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/file-upload’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/google-analytics’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/license’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/license’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/license’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/base/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/smoothness/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/license’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedHeader/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/KeyTable/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/data’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/license’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/images’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/as3/lib’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/css’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/images/psd’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/swf’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/api’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/core’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/ext’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/model’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/dropdown-check-list-1.4/js’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/dynatree1.2.4’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/farbtastic-color-picker’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/jquery/globalize/cultures’ is empty
WARNING: directory ‘epivizr/inst/www/src/lib/parallel’ is empty
* looking to see if a ‘data/datalist’ file should be added
* building ‘epivizr_1.8.1.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = "gzip", compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/smoothness/images/’