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BioC 3.2: BUILD report for epivizr on windows1.bioconductor.org

This page was generated on 2015-10-27 17:30:50 -0400 (Tue, 27 Oct 2015).

Package 323/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epivizr 1.8.0
Hector Corrada Bravo
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/epivizr
Last Changed Rev: 109589 / Revision: 109947
Last Changed Date: 2015-10-13 15:36:05 -0400 (Tue, 13 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded [ OK ] OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: epivizr
Version: 1.8.0
Command: chmod a+r epivizr -R && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data epivizr
StartedAt: 2015-10-26 21:47:53 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 21:50:36 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 162.9 seconds
RetCode: 0
Status:  OK  
PackageFile: epivizr_1.8.0.tar.gz
PackageFileSize: 1.399 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r epivizr -R && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data epivizr
###
##############################################################################
##############################################################################


* checking for file 'epivizr/DESCRIPTION' ... OK
* preparing 'epivizr':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'epivizr/inst/www/css/DataTables-1.9.4/media/css' is empty
WARNING: directory 'epivizr/inst/www/css/DataTables-1.9.4/media/images' is empty
WARNING: directory 'epivizr/inst/www/css/dropdown-check-list-1.4/css' is empty
WARNING: directory 'epivizr/inst/www/css/dynatree1.2.4/skin' is empty
WARNING: directory 'epivizr/inst/www/css/dynatree1.2.4/skin-vista' is empty
WARNING: directory 'epivizr/inst/www/css/farbtastic-color-picker' is empty
WARNING: directory 'epivizr/inst/www/css/theme/images' is empty
WARNING: directory 'epivizr/inst/www/image_sources' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/data' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/datatypes/deprecated' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/events' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/measurements' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/plugins/charts' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/ui/charts' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/ui/controls' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/utils' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz/workspaces' is empty
WARNING: directory 'epivizr/inst/www/src/epiviz-test/performance/testcases' is empty
WARNING: directory 'epivizr/inst/www/src/lib/closure/goog/structs' is empty
WARNING: directory 'epivizr/inst/www/src/lib/d3' is empty
WARNING: directory 'epivizr/inst/www/src/lib/expression-parser' is empty
WARNING: directory 'epivizr/inst/www/src/lib/file-saver' is empty
WARNING: directory 'epivizr/inst/www/src/lib/file-upload' is empty
WARNING: directory 'epivizr/inst/www/src/lib/google-analytics' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/docs/media/license' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/AutoFill/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/docs/media/license' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColReorder/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/docs/media/license' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColVis/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/base/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/smoothness/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/docs/media/license' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedColumns/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/FixedHeader/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/KeyTable/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/data' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/docs/media/license' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/images' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/Scroller/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/as3/lib' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/css' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/images/psd' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/TableTools/media/swf' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/api' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/core' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/ext' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/media/src/model' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/dropdown-check-list-1.4/js' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/dynatree1.2.4' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/farbtastic-color-picker' is empty
WARNING: directory 'epivizr/inst/www/src/lib/jquery/globalize/cultures' is empty
WARNING: directory 'epivizr/inst/www/src/lib/parallel' is empty
* looking to see if a 'data/datalist' file should be added
* building 'epivizr_1.8.0.tar.gz'
Warning in utils::tar(filepath, pkgname, compression = "gzip", compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  'epivizr/inst/www/src/lib/jquery/DataTables-1.9.4/extras/ColumnFilter/media/css/themes/smoothness/images/'