TFBSTools 1.8.3
Ge Tan
| Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/TFBSTools | | Last Changed Rev: 116154 / Revision: 116712 | | Last Changed Date: 2016-04-11 10:15:00 -0700 (Mon, 11 Apr 2016) |
| zin1 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | OK | OK | OK | |  |
| moscato1 | Windows Server 2008 R2 Standard (64-bit) / x64 | [ OK ] | OK | OK | OK | |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK | |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf TFBSTools.buildbin-libdir && mkdir TFBSTools.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/TFBSTools_1.8.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=TFBSTools.buildbin-libdir --merge-multiarch TFBSTools_1.8.3.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL TFBSTools_1.8.3.zip && rm TFBSTools_1.8.3.tar.gz TFBSTools_1.8.3.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 93817 100 93817 0 0 5155k 0 --:--:-- --:--:-- --:--:-- 7047k
install for i386
* installing *source* package 'TFBSTools' ...
** libs
gcc -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
matrixAlignerDynamic.c: In function 'score':
matrixAlignerDynamic.c:220:22: warning: 'best_pntr' may be used uninitialized in this function [-Wuninitialized]
gcc -m32 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O3 -Wall -std=gnu99 -mtune=core2 -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -m32 -shared -s -static-libgcc -o TFBSTools.dll tmp.def matrixAlignerDynamic.o R_init_TFBSTools.o -Ld:/RCompile/r-compiling/local/local323/lib/i386 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/TFBSTools.buildbin-libdir/TFBSTools/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a new generic function for 'seqLogo' in package 'TFBSTools'
Creating a generic function for 'colSums' from package 'base' in package 'TFBSTools'
Creating a generic function for 'rowSums' from package 'base' in package 'TFBSTools'
Creating a generic function for 'update' from package 'stats' in package 'TFBSTools'
Creating a generic function for 'as.matrix' from package 'base' in package 'TFBSTools'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'TFBSTools' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c matrixAlignerDynamic.c -o matrixAlignerDynamic.o
matrixAlignerDynamic.c: In function 'score':
matrixAlignerDynamic.c:220:22: warning: 'best_pntr' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -I"D:/biocbld/BBS-3˜1.2-B/R/include" -DNDEBUG -I"d:/RCompile/r-compiling/local/local323/include" -O2 -Wall -std=gnu99 -mtune=core2 -c R_init_TFBSTools.c -o R_init_TFBSTools.o
gcc -m64 -shared -s -static-libgcc -o TFBSTools.dll tmp.def matrixAlignerDynamic.o R_init_TFBSTools.o -Ld:/RCompile/r-compiling/local/local323/lib/x64 -Ld:/RCompile/r-compiling/local/local323/lib -LD:/biocbld/BBS-3˜1.2-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-3.2-bioc/meat/TFBSTools.buildbin-libdir/TFBSTools/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TFBSTools' as TFBSTools_1.8.3.zip
* DONE (TFBSTools)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'TFBSTools' successfully unpacked and MD5 sums checked