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BioC 3.2: BUILD report for SRAdb on oaxaca

This page was generated on 2016-04-23 10:24:41 -0700 (Sat, 23 Apr 2016).

Package 1014/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SRAdb 1.28.1
Jack Zhu
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/SRAdb
Last Changed Rev: 115412 / Revision: 116712
Last Changed Date: 2016-03-29 19:59:19 -0700 (Tue, 29 Mar 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  ERROR  skipped 
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 ...NOT SUPPORTED...NOT SUPPORTED...NOT SUPPORTED...
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: SRAdb
Version: 1.28.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SRAdb
StartedAt: 2016-04-22 18:25:07 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 18:25:20 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 13.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SRAdb
###
##############################################################################
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* checking for file ‘SRAdb/DESCRIPTION’ ... OK
* preparing ‘SRAdb’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: RSQLite
Loading required package: DBI
Loading required package: graph
Loading required package: RCurl
Loading required package: bitops
Setting options('download.file.method.GEOquery'='auto')
Setting options('GEOquery.inmemory.gpl'=FALSE)
trying URL 'http://dl.dropbox.com/u/51653511/SRAmetadb.sqlite.gz'

Error: processing vignette 'SRAdb.Rnw' failed with diagnostics:
 chunk 2 
Error in download.file(url_sra, destfile = localfile, mode = "wb", method = method) : 
  cannot open URL 'http://dl.dropbox.com/u/51653511/SRAmetadb.sqlite.gz'
Execution halted