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BioC 3.2: BUILD BIN report for IONiseR on oaxaca

This page was generated on 2016-04-23 10:29:24 -0700 (Sat, 23 Apr 2016).

Package 537/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 1.0.1
Mike Smith
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/IONiseR
Last Changed Rev: 113518 / Revision: 116712
Last Changed Date: 2016-02-11 01:55:06 -0800 (Thu, 11 Feb 2016)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: IONiseR
Version: 1.0.1
Command: rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh IONiseR_1.0.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R IONiseR.buildbin-libdir
StartedAt: 2016-04-23 05:48:22 -0700 (Sat, 23 Apr 2016)
EndedAt: 2016-04-23 05:48:41 -0700 (Sat, 23 Apr 2016)
EllapsedTime: 19.1 seconds
RetCode: 0
Status:  OK 
PackageFile: IONiseR_1.0.1.tgz
PackageFileSize: 1.856 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh IONiseR_1.0.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R IONiseR.buildbin-libdir
###
##############################################################################
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=IONiseR.buildbin-libdir IONiseR_1.0.1.tar.gz'
>>>>>>> 

* installing *source* package ‘IONiseR’ ...
** R
** inst
** preparing package for lazy loading
in method for ‘readInfo’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘rawData’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘baseCalled’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastq’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘[’ with signature ‘"Fast5Summary","ANY"’: no definition for class “Fast5Summary”
in method for ‘fastqTemplate’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastqComplement’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
in method for ‘fastq2D’ with signature ‘x="Fast5Summary"’: no definition for class “Fast5Summary”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (IONiseR)