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BioC 3.2: BUILD BIN report for FEM on perceval

This page was generated on 2015-11-10 14:49:12 -0800 (Tue, 10 Nov 2015).

Package 340/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FEM 2.6.0
Andrew E. Teschendorff
Snapshot Date: 2015-11-09 16:24:09 -0800 (Mon, 09 Nov 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/FEM
Last Changed Rev: 109589 / Revision: 110496
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: FEM
Version: 2.6.0
Command: rm -rf FEM.buildbin-libdir && mkdir FEM.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FEM_2.6.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FEM.buildbin-libdir
StartedAt: 2015-11-10 11:15:02 -0800 (Tue, 10 Nov 2015)
EndedAt: 2015-11-10 11:15:17 -0800 (Tue, 10 Nov 2015)
EllapsedTime: 15.7 seconds
RetCode: 0
Status:  OK 
PackageFile: FEM_2.6.0.tgz
PackageFileSize: 3.776 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf FEM.buildbin-libdir && mkdir FEM.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FEM_2.6.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FEM.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=FEM.buildbin-libdir FEM_2.6.0.tar.gz'
>>>>>>> 

* installing *source* package ‘FEM’ ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import by ‘graph::edges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::intersection’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::degree’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::union’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::plotMA’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::as.vector’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::.__C__dist’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::normalize’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::extractGraphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.ftM2other’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2adjM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::nodeRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::parRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__distGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::int2ftM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::duplicatedEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphBase’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::toDotWithRI’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__dist’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSetAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__MultiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2int’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::buildRepDepGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::calcProb’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::reverseEdgeDirections’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__renderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__clusterGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::aM2bpG’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph2SparseM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__multiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeSetIntersect0’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ugraphOld’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSetNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::validGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::sparseM2Graph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::numNoEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::eweights’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::extractGraphAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::MultiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::gxlTreeNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::boundary’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::eWV’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomEGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomNodeGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__simpleEdge’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::listEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::parRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::mostEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::subsetEdgeSets’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.dropEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::pathWeights’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::calcSumProb’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeSetUnion0’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__attrData’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph.par.get’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::aveNumEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph.par’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSet’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::nodeRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphAM’ when loading ‘FEM’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import by ‘graph::edges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::intersection’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::degree’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::union’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::plotMA’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::as.vector’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::.__C__dist’ when loading ‘FEM’
Warning: replacing previous import by ‘BiocGenerics::normalize’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::extractGraphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.ftM2other’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2adjM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::nodeRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::parRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__distGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::int2ftM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::duplicatedEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphBase’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::toDotWithRI’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__dist’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSetAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__MultiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2int’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::buildRepDepGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::calcProb’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::reverseEdgeDirections’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__renderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ftM2graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__clusterGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::aM2bpG’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph2SparseM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__multiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeSetIntersect0’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::ugraphOld’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSetNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::validGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::sparseM2Graph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::numNoEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::eweights’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::extractGraphAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::MultiGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::gxlTreeNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::boundary’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::eWV’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomEGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::randomNodeGraph’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__simpleEdge’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::listEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::parRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphNEL’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::mostEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::subsetEdgeSets’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeRenderInfo<-’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__graphBAM’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.dropEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::pathWeights’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::calcSumProb’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::edgeSetUnion0’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__attrData’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph.par.get’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::aveNumEdges’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graph.par’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::.__C__edgeSet’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::nodeRenderInfo’ when loading ‘FEM’
Warning: replacing previous import by ‘graph::graphAM’ when loading ‘FEM’
* DONE (FEM)