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This page was generated on 2024-10-16 08:30 -0400 (Wed, 16 Oct 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4763
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 41/46HostnameOS / ArchINSTALLBUILDCHECK
scAnnotatR.models 0.99.10  (landing page)
Johannes Griss
Snapshot Date: 2024-10-16 06:00 -0400 (Wed, 16 Oct 2024)
git_url: https://git.bioconductor.org/packages/scAnnotatR.models
git_branch: RELEASE_3_19
git_last_commit: 71d030b
git_last_commit_date: 2021-09-14 10:07:08 -0400 (Tue, 14 Sep 2021)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for scAnnotatR.models on nebbiolo1

To the developers/maintainers of the scAnnotatR.models package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: scAnnotatR.models
Version: 0.99.10
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data scAnnotatR.models
StartedAt: 2024-10-16 06:32:19 -0400 (Wed, 16 Oct 2024)
EndedAt: 2024-10-16 06:32:46 -0400 (Wed, 16 Oct 2024)
EllapsedTime: 26.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data scAnnotatR.models
###
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* checking for file ‘scAnnotatR.models/DESCRIPTION’ ... OK
* preparing ‘scAnnotatR.models’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘introduction.Rmd’ using rmarkdown
Failed with error:  'package 'Seurat' could not be loaded'

Quitting from lines 41-47 [unnamed-chunk-1] (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
failed to load resource
  name: AH95906
  title: Pretrained models
  reason: unable to find required package 'scAnnotatR'
--- failed re-building ‘introduction.Rmd’

SUMMARY: processing the following file failed:
  ‘introduction.Rmd’

Error: Vignette re-building failed.
Execution halted