Back to Build/check report for BioC 3.18 annotations |
|
This page was generated on 2024-04-17 08:30:07 -0400 (Wed, 17 Apr 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4677 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 4/45 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
AHMeSHDbs 0.99.6 (landing page) Koki Tsuyuzaki
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ||||||||
To the developers/maintainers of the AHMeSHDbs package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: AHMeSHDbs |
Version: 0.99.6 |
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:AHMeSHDbs.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings AHMeSHDbs_0.99.6.tar.gz |
StartedAt: 2024-04-17 06:33:32 -0400 (Wed, 17 Apr 2024) |
EndedAt: 2024-04-17 06:34:08 -0400 (Wed, 17 Apr 2024) |
EllapsedTime: 35.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: AHMeSHDbs.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:AHMeSHDbs.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings AHMeSHDbs_0.99.6.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.18-data-annotation/meat/AHMeSHDbs.Rcheck’ * using R version 4.3.3 (2024-02-29) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 * running under: Ubuntu 22.04.4 LTS * using session charset: UTF-8 * checking for file ‘AHMeSHDbs/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘AHMeSHDbs’ version ‘0.99.6’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘AHMeSHDbs’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘creating-MeSHDbs.Rmd’ using ‘UTF-8’... OK OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: OK
AHMeSHDbs.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL AHMeSHDbs ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’ * installing *source* package ‘AHMeSHDbs’ ... ** using staged installation ** inst ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AHMeSHDbs)
AHMeSHDbs.Rcheck/AHMeSHDbs-Ex.timings
name | user | system | elapsed | |
AHMeSHDbs-package | 0 | 0 | 0 | |