Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-11-02 11:41:24 -0400 (Thu, 02 Nov 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4729 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4463 |
lconway | macOS 12.6.5 Monterey | x86_64 | 4.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts" | 4478 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4464 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 2180/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
trigger 1.48.0 (landing page) John D. Storey
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.6.5 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
To the developers/maintainers of the trigger package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/trigger.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: trigger |
Version: 1.48.0 |
Command: /home/biocbuild/R/R-4.3.1/bin/R CMD INSTALL trigger |
StartedAt: 2023-11-01 20:49:03 -0000 (Wed, 01 Nov 2023) |
EndedAt: 2023-11-01 20:49:39 -0000 (Wed, 01 Nov 2023) |
EllapsedTime: 35.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.1/bin/R CMD INSTALL trigger ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.3.1/site-library’ * installing *source* package ‘trigger’ ... ** using staged installation ** libs using C compiler: ‘gcc (GCC) 10.3.1’ gcc -I"/home/biocbuild/R/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -c trigger.c -o trigger.o trigger.c: In function ‘mergeorder’: trigger.c:25:20: warning: variable ‘n3’ set but not used [-Wunused-but-set-variable] 25 | int i1,i2,i3,n1,n2,n3; | ^~ trigger.c: In function ‘sec_link_stat’: trigger.c:81:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable] 81 | int ntr, nct, i, j; | ^~~ trigger.c: In function ‘sec_link_stat_x’: trigger.c:153:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable] 153 | int ntr, nct, i, j, k, nk; | ^~~ trigger.c: In function ‘condi_indep_stat’: trigger.c:233:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable] 233 | int ntr, nct, i, j; | ^~~ trigger.c: In function ‘condi_indep_stat_x’: trigger.c:310:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable] 310 | int ntr, nct, i, j, k, nk; | ^~~ trigger.c: In function ‘condi_indep_stat_rx’: trigger.c:393:10: warning: variable ‘nct’ set but not used [-Wunused-but-set-variable] 393 | int ntr, nct, i, j, k, nk; | ^~~ gcc -shared -L/home/biocbuild/R/R-4.3.1/lib -L/usr/local/lib -o trigger.so trigger.o -L/home/biocbuild/R/R-4.3.1/lib -lR installing to /home/biocbuild/R/R-4.3.1/site-library/00LOCK-trigger/00new/trigger/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trigger)