Back to Mac ARM64 build report for BioC 3.17
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2023-10-20 09:38:07 -0400 (Fri, 20 Oct 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.1 (2023-06-16) -- "Beagle Scouts" 4347
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1342/2230HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
muscat 1.14.0  (landing page)
Helena L. Crowell
Snapshot Date: 2023-10-15 14:00:07 -0400 (Sun, 15 Oct 2023)
git_url: https://git.bioconductor.org/packages/muscat
git_branch: RELEASE_3_17
git_last_commit: 2f8d169
git_last_commit_date: 2023-04-25 11:12:01 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    ERROR  skippedskipped

BUILD results for muscat on kjohnson2


To the developers/maintainers of the muscat package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: muscat
Version: 1.14.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data muscat
StartedAt: 2023-10-16 11:44:39 -0400 (Mon, 16 Oct 2023)
EndedAt: 2023-10-16 11:50:08 -0400 (Mon, 16 Oct 2023)
EllapsedTime: 329.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data muscat
###
##############################################################################
##############################################################################


* checking for file ‘muscat/DESCRIPTION’ ... OK
* preparing ‘muscat’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘analysis.Rmd’ using rmarkdown
--- finished re-building ‘analysis.Rmd’

--- re-building ‘simulation.Rmd’ using rmarkdown

Quitting from lines 168-171 [p_dd] (simulation.Rmd)
Error: processing vignette 'simulation.Rmd' failed with diagnostics:
sum(u$p_dd) == 1 is not TRUE
--- failed re-building ‘simulation.Rmd’

SUMMARY: processing the following file failed:
  ‘simulation.Rmd’

Error: Vignette re-building failed.
Execution halted