Back to Mac ARM64 build report for BioC 3.17 |
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This page was generated on 2023-10-20 09:38:14 -0400 (Fri, 20 Oct 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 2133/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Travel 1.8.0 (landing page) Jiefei Wang
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | ERROR | ERROR | skipped | skipped | ||||||||
To the developers/maintainers of the Travel package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: Travel |
Version: 1.8.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Travel |
StartedAt: 2023-10-15 15:11:06 -0400 (Sun, 15 Oct 2023) |
EndedAt: 2023-10-15 15:12:07 -0400 (Sun, 15 Oct 2023) |
EllapsedTime: 60.6 seconds |
RetCode: 1 |
Status: ERROR |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL Travel ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’ * installing *source* package ‘Travel’ ... ** using staged installation ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using C++11 using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Cpp_interface.cpp -o Cpp_interface.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c altfile_operations.cpp -o altfile_operations.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c altmmap_operations.cpp -o altmmap_operations.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c altrep_manager.cpp -o altrep_manager.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Cache_block.cpp -o class_Cache_block.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Filesystem_cache_copier.cpp -o class_Filesystem_cache_copier.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Filesystem_file_data.cpp -o class_Filesystem_file_data.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Memory_mapped.cpp -o class_Memory_mapped.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found In file included from class_Memory_mapped.cpp:19: ./class_Memory_mapped.h:19:16: warning: private field 'hint' is not used [-Wunused-private-field] Cache_hint hint = Normal; ^ ./class_Memory_mapped.h:21:11: warning: private field 'file_handle' is not used [-Wunused-private-field] void *file_handle = nullptr; ^ ./class_Memory_mapped.h:22:11: warning: private field 'map_handle' is not used [-Wunused-private-field] void *map_handle = nullptr; ^ 3 warnings generated. clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Protect_guard.cpp -o class_Protect_guard.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Subset_index.cpp -o class_Subset_index.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Timer.cpp -o class_Timer.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c class_Unique_buffer.cpp -o class_Unique_buffer.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c examples.cpp -o examples.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c filesystem_manager.cpp -o filesystem_manager.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c filesystem_operations_dokan.cpp -o filesystem_operations_dokan.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG `pkg-config fuse --cflags` -I'/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c filesystem_operations_fuse.cpp -o filesystem_operations_fuse.o Package fuse was not found in the pkg-config search path. Perhaps you should add the directory containing `fuse.pc' to the PKG_CONFIG_PATH environment variable No package 'fuse' found filesystem_operations_fuse.cpp:4:10: fatal error: 'fuse_lowlevel.h' file not found #include <fuse_lowlevel.h> ^~~~~~~~~~~~~~~~~ 1 error generated. make: *** [filesystem_operations_fuse.o] Error 1 ERROR: compilation failed for package ‘Travel’ * removing ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/Travel’