Back to Mac ARM64 build report for BioC 3.17 |
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This page was generated on 2023-10-20 09:37:57 -0400 (Fri, 20 Oct 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kjohnson2 | macOS 12.6.1 Monterey | arm64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4347 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 14/2230 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
ADaCGH2 2.40.0 (landing page) Ramon Diaz-Uriarte
| kjohnson2 | macOS 12.6.1 Monterey / arm64 | OK | OK | OK | OK | ||||||||
To the developers/maintainers of the ADaCGH2 package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: ADaCGH2 |
Version: 2.40.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ADaCGH2 |
StartedAt: 2023-10-15 18:39:10 -0400 (Sun, 15 Oct 2023) |
EndedAt: 2023-10-15 18:39:59 -0400 (Sun, 15 Oct 2023) |
EllapsedTime: 48.8 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ADaCGH2 ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library’ * installing *source* package ‘ADaCGH2’ ... ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c r_haarseg.c -o r_haarseg.o r_haarseg.c:65:12: warning: unused variable 'totalNorm' [-Wunused-variable] double totalNorm; ^ r_haarseg.c:61:12: warning: variable 'lowSquareSum' set but not used [-Wunused-but-set-variable] double lowSquareSum; ^ r_haarseg.c:152:8: warning: '/*' within block comment [-Wcomment] }/* for j */ ^ r_haarseg.c:176:8: warning: '/*' within block comment [-Wcomment] }/* for j */ ^ r_haarseg.c:128:9: warning: unused variable 'j' [-Wunused-variable] int k,j; ^ 5 warnings generated. clang -arch arm64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o ADaCGH2.so init.o r_haarseg.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/library/00LOCK-ADaCGH2/00new/ADaCGH2/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ADaCGH2)