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This page was generated on 2023-04-19 11:01:55 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
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BUILD results for inveRsion on kjohnson


To the developers/maintainers of the inveRsion package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 988/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
inveRsion 1.46.2  (landing page)
Alejandro Caceres
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/inveRsion
git_branch: RELEASE_3_16
git_last_commit: 0a0cb5e
git_last_commit_date: 2023-01-19 11:17:24 -0400 (Thu, 19 Jan 2023)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: inveRsion
Version: 1.46.2
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data inveRsion
StartedAt: 2023-04-17 11:33:30 -0400 (Mon, 17 Apr 2023)
EndedAt: 2023-04-17 11:33:59 -0400 (Mon, 17 Apr 2023)
EllapsedTime: 28.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data inveRsion
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* checking for file ‘inveRsion/DESCRIPTION’ ... OK
* preparing ‘inveRsion’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘inveRsion.Rnw’ using Sweave
Loading required package: haplo.stats
Loading required package: arsenal


Hola!

welcome to inevRsion package. 
 
 

type: manual() for full manual 
      vignette("inveRsion") for a quick start 

Warning: Package 'inveRsion' is deprecated and will be removed from Bioconductor
  version 3.17
-Code haplotypes-
  reading data from haplotype file:
  /private/tmp/RtmpsO7mGv/Rinst1245f2fffc378/inveRsion/extdata/haplotypesROI.txt 

  preparing data
  Number of brakepoints: 248

Error: processing vignette 'inveRsion.Rnw' failed with diagnostics:
 chunk 3 
Error in lociPos[lociSel]/10^6 : non-numeric argument to binary operator

--- failed re-building ‘inveRsion.Rnw’

SUMMARY: processing the following file failed:
  ‘inveRsion.Rnw’

Error: Vignette re-building failed.
Execution halted