Back to Mac ARM64 build report for BioC 3.16
ABCDEFGHIJKLMN[O]PQRSTUVWXYZ

This page was generated on 2023-04-19 11:01:56 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for OncoSimulR on kjohnson


To the developers/maintainers of the OncoSimulR package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1398/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
OncoSimulR 4.0.2  (landing page)
Ramon Diaz-Uriarte
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/OncoSimulR
git_branch: RELEASE_3_16
git_last_commit: eee6c7e
git_last_commit_date: 2023-02-20 14:06:33 -0400 (Mon, 20 Feb 2023)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: OncoSimulR
Version: 4.0.2
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR
StartedAt: 2023-04-17 19:38:16 -0400 (Mon, 17 Apr 2023)
EndedAt: 2023-04-17 19:42:13 -0400 (Mon, 17 Apr 2023)
EllapsedTime: 237.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR
###
##############################################################################
##############################################################################


* checking for file ‘OncoSimulR/DESCRIPTION’ ... OK
* preparing ‘OncoSimulR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘OncoSimulR.Rmd’ using rmarkdown
Warning: ggrepel: 12 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 103 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 7 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 20 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Quitting from lines 9878-9880 (OncoSimulR.Rmd) 
Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building ‘OncoSimulR.Rmd’

SUMMARY: processing the following file failed:
  ‘OncoSimulR.Rmd’

Error: Vignette re-building failed.
Execution halted