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This page was generated on 2023-04-19 11:01:56 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
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INSTALL results for OmnipathR on kjohnson


To the developers/maintainers of the OmnipathR package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1393/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
OmnipathR 3.6.6  (landing page)
Denes Turei
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/OmnipathR
git_branch: RELEASE_3_16
git_last_commit: 27bb65f
git_last_commit_date: 2023-03-21 11:32:02 -0400 (Tue, 21 Mar 2023)
kjohnsonmacOS 13.0 Ventura / arm64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: OmnipathR
Version: 3.6.6
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL OmnipathR
StartedAt: 2023-04-16 15:43:48 -0400 (Sun, 16 Apr 2023)
EndedAt: 2023-04-16 15:44:11 -0400 (Sun, 16 Apr 2023)
EllapsedTime: 22.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL OmnipathR
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library’
* installing *source* package ‘OmnipathR’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
[2023-04-16 15:44:06] [INFO]    [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:06] [TRACE]   [OmnipathR] Running on a build server, wiping cache.
[2023-04-16 15:44:06] [TRACE]   [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:06] [TRACE]   [OmnipathR] Contains 1 files.
[2023-04-16 15:44:06] [TRACE]   [OmnipathR] Cache is locked: FALSE.
[2023-04-16 15:44:06] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:07] [TRACE]   [OmnipathR] Pandoc version: `2.7.3`.
[2023-04-16 15:44:07] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package can be loaded from final location
[2023-04-16 15:44:10] [INFO]    [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:10] [TRACE]   [OmnipathR] Running on a build server, wiping cache.
[2023-04-16 15:44:10] [TRACE]   [OmnipathR] Cache is at `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:10] [TRACE]   [OmnipathR] Contains 1 files.
[2023-04-16 15:44:10] [TRACE]   [OmnipathR] Cache is locked: FALSE.
[2023-04-16 15:44:10] [SUCCESS] [OmnipathR] Removing all cache contents from `/Users/biocbuild/Library/Caches/OmnipathR`.
[2023-04-16 15:44:10] [TRACE]   [OmnipathR] Pandoc version: `2.7.3`.
[2023-04-16 15:44:11] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package keeps a record of temporary installation path
* DONE (OmnipathR)