Julien Wollbrett
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/BgeeCall |
| Branch: RELEASE_3_12 |
| Last Commit: 1b74dcf |
| Last Changed Date: 2020-12-10 05:55:05 -0400 (Thu, 10 Dec 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:00 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the BgeeCall package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 140/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BgeeCall 1.6.2 (landing page) Julien Wollbrett
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BgeeCall |
| Version: 1.6.2 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/BgeeCall_1.6.2.tar.gz && rm -rf BgeeCall.buildbin-libdir && mkdir BgeeCall.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeCall.buildbin-libdir BgeeCall_1.6.2.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BgeeCall_1.6.2.zip && rm BgeeCall_1.6.2.tar.gz BgeeCall_1.6.2.zip |
| StartedAt: 2021-05-05 18:10:24 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:12:02 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 98.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/BgeeCall_1.6.2.tar.gz && rm -rf BgeeCall.buildbin-libdir && mkdir BgeeCall.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeCall.buildbin-libdir BgeeCall_1.6.2.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BgeeCall_1.6.2.zip && rm BgeeCall_1.6.2.tar.gz BgeeCall_1.6.2.zip
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install for i386
* installing *source* package 'BgeeCall' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BgeeCall'
finding HTML links ... done
AbundanceMetadata-class html
BgeeCall html
BgeeMetadata-class html
KallistoMetadata-class html
UserMetadata-class html
create_kallisto_index html
download_fasta_intergenic html
download_kallisto html
generate_calls_workflow html
generate_presence_absence html
generate_slurm_calls html
generate_slurm_indexes html
getIntergenicPrefix html
getIntergenicRelease html
getRunIds html
getSimpleArborescence html
getWorkingPath html
list_bgee_ref_intergenic_species html
list_community_ref_intergenic_species html
list_intergenic_release html
merge_transcriptome_and_intergenic html
run_kallisto html
run_tximport html
setAnnotationFromFile html
setAnnotationFromObject html
setIntergenicRelease html
setOutputDir html
setRNASeqLibPath html
setRunIds html
setSimpleArborescence html
setTranscriptomeFromFile html
setTranscriptomeFromObject html
setWorkingPath html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BgeeCall' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BgeeCall' as BgeeCall_1.6.2.zip
* DONE (BgeeCall)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'BgeeCall' successfully unpacked and MD5 sums checked