Jiri Hon
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/triplex |
| Branch: RELEASE_3_11 |
| Last Commit: e3bb479 |
| Last Changed Date: 2020-04-27 14:34:22 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:55:58 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE triplex PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1836/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| triplex 1.28.0 Jiri Hon
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: triplex |
| Version: 1.28.0 |
| Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL triplex |
| StartedAt: 2020-10-16 16:24:44 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 16:25:02 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 17.8 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL triplex ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’ * installing *source* package ‘triplex’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c Biostrings_stubs.c -o Biostrings_stubs.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c IRanges_stubs.c -o IRanges_stubs.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c R_init_triplex.c -o R_init_triplex.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c XVector_stubs.c -o XVector_stubs.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c align.c -o align.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c align_interface.c -o align_interface.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c dl_list.c -o dl_list.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c interval.c -o interval.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c libtriplex.c -o libtriplex.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c progress.c -o progress.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c search.c -o search.o gcc -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.11-bioc/R/library/S4Vectors/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/IRanges/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/XVector/include' -I'/home/biocbuild/bbs-3.11-bioc/R/library/Biostrings/include' -I/usr/local/include -fpic -g -O2 -Wall -c search_interface.c -o search_interface.o gcc -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o triplex.so Biostrings_stubs.o IRanges_stubs.o R_init_triplex.o XVector_stubs.o align.o align_interface.o dl_list.o interval.o libtriplex.o progress.o search.o search_interface.o -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-triplex/00new/triplex/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (triplex)