Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

INSTALL report for transcriptogramer on tokay2

This page was generated on 2020-10-17 11:57:57 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE transcriptogramer PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1822/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
transcriptogramer 1.10.0
Diego Morais
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/transcriptogramer
Branch: RELEASE_3_11
Last Commit: d294dbb
Last Changed Date: 2020-04-27 15:12:13 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: transcriptogramer
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/transcriptogramer_1.10.0.tar.gz && rm -rf transcriptogramer.buildbin-libdir && mkdir transcriptogramer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=transcriptogramer.buildbin-libdir transcriptogramer_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL transcriptogramer_1.10.0.zip && rm transcriptogramer_1.10.0.tar.gz transcriptogramer_1.10.0.zip
StartedAt: 2020-10-16 18:13:50 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:14:58 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 67.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/transcriptogramer_1.10.0.tar.gz && rm -rf transcriptogramer.buildbin-libdir && mkdir transcriptogramer.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=transcriptogramer.buildbin-libdir transcriptogramer_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL transcriptogramer_1.10.0.zip && rm transcriptogramer_1.10.0.tar.gz transcriptogramer_1.10.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 17 3079k   17  528k    0     0  7250k      0 --:--:-- --:--:-- --:--:-- 7880k
100 3079k  100 3079k    0     0  26.8M      0 --:--:-- --:--:-- --:--:-- 28.3M

install for i386

* installing *source* package 'transcriptogramer' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'transcriptogramer'
    finding HTML links ... done
    DE-method                               html  
    DEsymbols                               html  
    GPL570                                  html  
    GSE9988                                 html  
    Hs700                                   html  
    Hs800                                   html  
    Hs900                                   html  
    HsBPTerms                               html  
    Mm700                                   html  
    Mm800                                   html  
    Mm900                                   html  
    Rn700                                   html  
    Rn800                                   html  
    Rn900                                   html  
    Sc700                                   html  
    Sc800                                   html  
    Sc900                                   html  
    Terms-method                            html  
    Transcriptogram-class                   html  
    association                             html  
    clusterEnrichment-method                html  
    clusterVisualization-method             html  
    connectivityProperties-method           html  
    differentiallyExpressed-method          html  
    enrichmentPlot-method                   html  
    orderingProperties-method               html  
    radius-method                           html  
    transcriptogramPreprocess               html  
    transcriptogramStep1-method             html  
    transcriptogramStep2-method             html  
    transcriptogramer-package               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'transcriptogramer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'transcriptogramer' as transcriptogramer_1.10.0.zip
* DONE (transcriptogramer)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'transcriptogramer' successfully unpacked and MD5 sums checked