Maren Sitte
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/pwOmics |
| Branch: RELEASE_3_11 |
| Last Commit: 9a7b3ec |
| Last Changed Date: 2020-04-27 14:49:00 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:31 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE pwOmics PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1384/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| pwOmics 1.20.0 Maren Sitte
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: pwOmics |
| Version: 1.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/pwOmics_1.20.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.20.0.zip && rm pwOmics_1.20.0.tar.gz pwOmics_1.20.0.zip |
| StartedAt: 2020-10-16 17:53:44 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:55:48 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 124.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/pwOmics_1.20.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.20.0.zip && rm pwOmics_1.20.0.tar.gz pwOmics_1.20.0.zip
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install for i386
* installing *source* package 'pwOmics' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'pwOmics'
finding HTML links ... done
OmicsExampleData html
PWidentallprots html
PWidentallprotssub html
PWidenttps html
SteinerTree_cons html
TFidentallgenes html
TFidenttps html
addFeedbackLoops html
clusterTimeProfiles html
consDynamicNet html
createBiopaxnew html
createIntIDs html
findSignalingAxes html
findxneighborsoverlap html
findxnextneighbors html
genGenelists html
genGenelistssub html
genIntIDs html
generate_DSSignalingBase html
genfullConsensusGraph html
getAlias_Ensemble html
getAliasfromSTRINGIDs html
getBiopaxModel html
getConsensusSTRINGIDs html
getDS_PWs html
getDS_TFs html
getDS_TGs html
getFCsplines html
getGenesIntersection html
getOmicsDataset html
getOmicsTimepoints html
getOmicsallGeneIDs html
getOmicsallProteinIDs html
getProteinIntersection html
getSTRING_graph html
getTFIntersection html
getUS_PWs html
getUS_TFs html
getUS_regulators html
get_matching_transcripts html
getbipartitegraphInfo html
gettpIntersection html
identPWsofTFs html
identRegulators html
identTFTGsinPWs html
identTFs html
identifyPR html
identifyPWTFTGs html
identifyPWs html
identifyRsofTFs html
identifyTFs html
infoConsensusGraph html
loadGenelists html
loadPWs html
plotConsDynNet html
plotConsensusGraph html
plotConsensusProfiles html
plotTimeProfileClusters html
predictFCvals html
preparePWinfo html
print.OmicsData html
pwIntOmics-package html
readOmics html
readPWdata html
readPhosphodata html
readTFdata html
readTFtargets html
selectPWsofTFs html
staticConsensusNet html
temp_correlations html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'pwOmics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pwOmics' as pwOmics_1.20.0.zip
* DONE (pwOmics)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'pwOmics' successfully unpacked and MD5 sums checked